RNA–Protein interactions for RNA: ENST00000511115.5

PCDH18-205, Transcript of protocadherin 18, humanhuman

TSL 2 BASIC

Gene PCDH18, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-205ENST00000511115 NISCHQ9Y2I1 1504 aa20.02■□□□□ 0.79
PCDH18-205ENST00000511115 AEBP2Q6ZN18 517 aaPredicted RBP19.75■□□□□ 0.75
PCDH18-205ENST00000511115 ABCC9O60706 1549 aa18.66■□□□□ 0.58
PCDH18-205ENST00000511115 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
PCDH18-205ENST00000511115 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
PCDH18-205ENST00000511115 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
PCDH18-205ENST00000511115 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
PCDH18-205ENST00000511115 PABPN1Q86U42 306 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDH18-205ENST00000511115 NACADO15069 1562 aa17.26■□□□□ 0.35
PCDH18-205ENST00000511115 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
PCDH18-205ENST00000511115 UNC13AQ9UPW8 1703 aa17.18■□□□□ 0.34
PCDH18-205ENST00000511115 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
PCDH18-205ENST00000511115 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
PCDH18-205ENST00000511115 CECR2Q9BXF3 1484 aa16.84■□□□□ 0.29
PCDH18-205ENST00000511115 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
PCDH18-205ENST00000511115 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
PCDH18-205ENST00000511115 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
PCDH18-205ENST00000511115 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
PCDH18-205ENST00000511115 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
PCDH18-205ENST00000511115 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
PCDH18-205ENST00000511115 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
PCDH18-205ENST00000511115 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
PCDH18-205ENST00000511115 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
PCDH18-205ENST00000511115 CUX2O14529 1486 aa16.21■□□□□ 0.19
PCDH18-205ENST00000511115 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
PCDH18-205ENST00000511115 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
PCDH18-205ENST00000511115 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
PCDH18-205ENST00000511115 NESP48681 1621 aa15.91■□□□□ 0.14
PCDH18-205ENST00000511115 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
PCDH18-205ENST00000511115 FOXD1Q16676 465 aa15.87■□□□□ 0.13
PCDH18-205ENST00000511115 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
PCDH18-205ENST00000511115 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
PCDH18-205ENST00000511115 HMGXB3Q12766 1538 aa15.77■□□□□ 0.11
PCDH18-205ENST00000511115 SMARCA2P51531 1590 aa15.76■□□□□ 0.11
PCDH18-205ENST00000511115 SMARCA4P51532 1647 aa15.72■□□□□ 0.11
PCDH18-205ENST00000511115 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
PCDH18-205ENST00000511115 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
PCDH18-205ENST00000511115 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
PCDH18-205ENST00000511115 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
PCDH18-205ENST00000511115 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
PCDH18-205ENST00000511115 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
PCDH18-205ENST00000511115 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
PCDH18-205ENST00000511115 WDR62O43379 1518 aa15.45■□□□□ 0.06
PCDH18-205ENST00000511115 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
PCDH18-205ENST00000511115 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
PCDH18-205ENST00000511115 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
PCDH18-205ENST00000511115 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
PCDH18-205ENST00000511115 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
PCDH18-205ENST00000511115 RIMBP3CA6NJZ7 1639 aa15.3■□□□□ 0.04
PCDH18-205ENST00000511115 RIMBP3BA6NNM3 1639 aa15.3■□□□□ 0.04
PCDH18-205ENST00000511115 RIMBP3Q9UFD9 1639 aa15.3■□□□□ 0.04
PCDH18-205ENST00000511115 WIZO95785 1651 aa15.27■□□□□ 0.04
PCDH18-205ENST00000511115 URB2Q14146 1524 aaKnown RBP15.2■□□□□ 0.02
PCDH18-205ENST00000511115 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
PCDH18-205ENST00000511115 CFTRP13569 1480 aa15.17■□□□□ 0.02
PCDH18-205ENST00000511115 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
PCDH18-205ENST00000511115 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
PCDH18-205ENST00000511115 MSH5O43196 834 aa15.11■□□□□ 0.01
PCDH18-205ENST00000511115 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
PCDH18-205ENST00000511115 IFT140Q96RY7 1462 aa15.04■□□□□ -0
PCDH18-205ENST00000511115 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
PCDH18-205ENST00000511115 ARAP1Q96P48 1450 aa15.01□□□□□ -0.01
PCDH18-205ENST00000511115 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
PCDH18-205ENST00000511115 CHD1O14646 1710 aa14.99□□□□□ -0.01
PCDH18-205ENST00000511115 EIF4G3O43432 1585 aaKnown RBP14.98□□□□□ -0.01
PCDH18-205ENST00000511115 FBLN2P98095 1184 aa14.95□□□□□ -0.02
PCDH18-205ENST00000511115 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
PCDH18-205ENST00000511115 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
PCDH18-205ENST00000511115 AQRO60306 1485 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDH18-205ENST00000511115 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
PCDH18-205ENST00000511115 CCDC88BA6NC98 1476 aa14.85□□□□□ -0.03
PCDH18-205ENST00000511115 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
PCDH18-205ENST00000511115 DNMBPQ6XZF7 1577 aa14.84□□□□□ -0.03
PCDH18-205ENST00000511115 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
PCDH18-205ENST00000511115 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
PCDH18-205ENST00000511115 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
PCDH18-205ENST00000511115 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
PCDH18-205ENST00000511115 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
PCDH18-205ENST00000511115 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
PCDH18-205ENST00000511115 SYNJ1O43426 1573 aa14.71□□□□□ -0.05
PCDH18-205ENST00000511115 SOGA1O94964 1423 aa14.71□□□□□ -0.05
PCDH18-205ENST00000511115 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
PCDH18-205ENST00000511115 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
PCDH18-205ENST00000511115 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
PCDH18-205ENST00000511115 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
PCDH18-205ENST00000511115 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
PCDH18-205ENST00000511115 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
PCDH18-205ENST00000511115 PIAS4Q8N2W9 510 aaPredicted RBP14.6□□□□□ -0.07
PCDH18-205ENST00000511115 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
PCDH18-205ENST00000511115 ERCC6L2Q5T890 1561 aa14.54□□□□□ -0.08
PCDH18-205ENST00000511115 CUX1P39880 1505 aa14.52□□□□□ -0.08
PCDH18-205ENST00000511115 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
PCDH18-205ENST00000511115 CEP170Q5SW79 1584 aa14.44□□□□□ -0.1
PCDH18-205ENST00000511115 ILDR1Q86SU0 546 aaPredicted RBP14.43□□□□□ -0.1
PCDH18-205ENST00000511115 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
PCDH18-205ENST00000511115 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
PCDH18-205ENST00000511115 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
PCDH18-205ENST00000511115 KDM4FA0A1W2PPD8 638 aa14.38□□□□□ -0.11
PCDH18-205ENST00000511115 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
PCDH18-205ENST00000511115 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms