RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 NISCHQ9Y2I1 1504 aa30.44■■■□□ 2.46
COPS4-208ENST00000510801 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
COPS4-208ENST00000510801 ABCC9O60706 1549 aa26.39■■□□□ 1.82
COPS4-208ENST00000510801 NACADO15069 1562 aa25.5■■□□□ 1.67
COPS4-208ENST00000510801 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
COPS4-208ENST00000510801 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
COPS4-208ENST00000510801 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
COPS4-208ENST00000510801 DCAF1Q9Y4B6 1507 aa25.31■■□□□ 1.64
COPS4-208ENST00000510801 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
COPS4-208ENST00000510801 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
COPS4-208ENST00000510801 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
COPS4-208ENST00000510801 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
COPS4-208ENST00000510801 SHROOM4Q9ULL8 1493 aa24.62■■□□□ 1.53
COPS4-208ENST00000510801 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
COPS4-208ENST00000510801 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
COPS4-208ENST00000510801 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
COPS4-208ENST00000510801 CC2D2AQ9P2K1 1620 aa23.91■■□□□ 1.42
COPS4-208ENST00000510801 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
COPS4-208ENST00000510801 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
COPS4-208ENST00000510801 NCAPD3P42695 1498 aa23.57■■□□□ 1.36
COPS4-208ENST00000510801 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
COPS4-208ENST00000510801 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
COPS4-208ENST00000510801 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
COPS4-208ENST00000510801 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
COPS4-208ENST00000510801 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
COPS4-208ENST00000510801 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
COPS4-208ENST00000510801 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
COPS4-208ENST00000510801 RSF1Q96T23 1441 aaPredicted RBP23.18■■□□□ 1.3
COPS4-208ENST00000510801 WIZO95785 1651 aa23.06■■□□□ 1.28
COPS4-208ENST00000510801 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
COPS4-208ENST00000510801 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
COPS4-208ENST00000510801 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
COPS4-208ENST00000510801 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
COPS4-208ENST00000510801 NESP48681 1621 aa22.84■■□□□ 1.25
COPS4-208ENST00000510801 ERCC6Q03468 1493 aa22.78■■□□□ 1.24
COPS4-208ENST00000510801 PDS5BQ9NTI5 1447 aa22.75■■□□□ 1.23
COPS4-208ENST00000510801 CFTRP13569 1480 aa22.72■■□□□ 1.23
COPS4-208ENST00000510801 CUX2O14529 1486 aa22.68■■□□□ 1.22
COPS4-208ENST00000510801 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
COPS4-208ENST00000510801 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
COPS4-208ENST00000510801 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
COPS4-208ENST00000510801 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
COPS4-208ENST00000510801 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
COPS4-208ENST00000510801 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
COPS4-208ENST00000510801 WDR62O43379 1518 aa22.43■■□□□ 1.18
COPS4-208ENST00000510801 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
COPS4-208ENST00000510801 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
COPS4-208ENST00000510801 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
COPS4-208ENST00000510801 ABCC8Q09428 1581 aa22.24■■□□□ 1.15
COPS4-208ENST00000510801 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
COPS4-208ENST00000510801 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
COPS4-208ENST00000510801 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
COPS4-208ENST00000510801 DNAJC5Q9H3Z4 198 aa22.01■■□□□ 1.11
COPS4-208ENST00000510801 POLA1P09884 1462 aaPredicted RBP21.97■■□□□ 1.11
COPS4-208ENST00000510801 CUX1P39880 1505 aa21.96■■□□□ 1.11
COPS4-208ENST00000510801 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
COPS4-208ENST00000510801 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
COPS4-208ENST00000510801 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
COPS4-208ENST00000510801 SOGA1O94964 1423 aa21.88■■□□□ 1.09
COPS4-208ENST00000510801 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
COPS4-208ENST00000510801 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
COPS4-208ENST00000510801 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
COPS4-208ENST00000510801 EIF4G3O43432 1585 aaKnown RBP21.78■■□□□ 1.08
COPS4-208ENST00000510801 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
COPS4-208ENST00000510801 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
COPS4-208ENST00000510801 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.07
COPS4-208ENST00000510801 BIVM-ERCC5R4GMW8 1640 aa21.75■■□□□ 1.07
COPS4-208ENST00000510801 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
COPS4-208ENST00000510801 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
COPS4-208ENST00000510801 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
COPS4-208ENST00000510801 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
COPS4-208ENST00000510801 GRIN2BQ13224 1484 aa21.65■■□□□ 1.06
COPS4-208ENST00000510801 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
COPS4-208ENST00000510801 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
COPS4-208ENST00000510801 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
COPS4-208ENST00000510801 SNAPC4Q5SXM2 1469 aa21.57■■□□□ 1.04
COPS4-208ENST00000510801 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
COPS4-208ENST00000510801 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
COPS4-208ENST00000510801 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
COPS4-208ENST00000510801 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
COPS4-208ENST00000510801 CHD1O14646 1710 aa21.43■■□□□ 1.02
COPS4-208ENST00000510801 FBLN2P98095 1184 aa21.42■■□□□ 1.02
COPS4-208ENST00000510801 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
COPS4-208ENST00000510801 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
COPS4-208ENST00000510801 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
COPS4-208ENST00000510801 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
COPS4-208ENST00000510801 GRIN2AQ12879 1464 aa21.36■■□□□ 1.01
COPS4-208ENST00000510801 IGF1RP08069 1367 aa21.34■■□□□ 1.01
COPS4-208ENST00000510801 NUP160Q12769 1436 aa21.32■■□□□ 1
COPS4-208ENST00000510801 ARHGEF11O15085 1522 aa21.3■■□□□ 1
COPS4-208ENST00000510801 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
COPS4-208ENST00000510801 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
COPS4-208ENST00000510801 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
COPS4-208ENST00000510801 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
COPS4-208ENST00000510801 CUL7Q14999 1698 aa21.21■□□□□ 0.99
COPS4-208ENST00000510801 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
COPS4-208ENST00000510801 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
COPS4-208ENST00000510801 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
COPS4-208ENST00000510801 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
COPS4-208ENST00000510801 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms