RNA–Protein interactions for RNA: ENST00000510757.1

TRIO-216, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-216ENST00000510757 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
TRIO-216ENST00000510757 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.11
TRIO-216ENST00000510757 ABCC9O60706 1549 aa14□□□□□ -0.17
TRIO-216ENST00000510757 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
TRIO-216ENST00000510757 NACADO15069 1562 aa13.47□□□□□ -0.25
TRIO-216ENST00000510757 RB1CC1Q8TDY2 1594 aa13.45□□□□□ -0.26
TRIO-216ENST00000510757 MYO15BQ96JP2 1530 aa13.44□□□□□ -0.26
TRIO-216ENST00000510757 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
TRIO-216ENST00000510757 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
TRIO-216ENST00000510757 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
TRIO-216ENST00000510757 BICRAQ9NZM4 1560 aa13.19□□□□□ -0.3
TRIO-216ENST00000510757 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRIO-216ENST00000510757 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
TRIO-216ENST00000510757 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
TRIO-216ENST00000510757 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
TRIO-216ENST00000510757 EIF4G1Q04637 1599 aaKnown RBP12.75□□□□□ -0.37
TRIO-216ENST00000510757 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
TRIO-216ENST00000510757 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
TRIO-216ENST00000510757 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
TRIO-216ENST00000510757 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
TRIO-216ENST00000510757 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
TRIO-216ENST00000510757 ATAD2BQ9ULI0 1458 aa12.47□□□□□ -0.41
TRIO-216ENST00000510757 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
TRIO-216ENST00000510757 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
TRIO-216ENST00000510757 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
TRIO-216ENST00000510757 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
TRIO-216ENST00000510757 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
TRIO-216ENST00000510757 WIZO95785 1651 aa12.32□□□□□ -0.44
TRIO-216ENST00000510757 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
TRIO-216ENST00000510757 NESP48681 1621 aa12.18□□□□□ -0.46
TRIO-216ENST00000510757 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
TRIO-216ENST00000510757 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
TRIO-216ENST00000510757 CADPSQ9ULU8 1353 aa12.06□□□□□ -0.48
TRIO-216ENST00000510757 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
TRIO-216ENST00000510757 CFTRP13569 1480 aa12.03□□□□□ -0.48
TRIO-216ENST00000510757 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
TRIO-216ENST00000510757 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
TRIO-216ENST00000510757 ERCC6Q03468 1493 aa11.96□□□□□ -0.49
TRIO-216ENST00000510757 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.49
TRIO-216ENST00000510757 CUX2O14529 1486 aa11.92□□□□□ -0.5
TRIO-216ENST00000510757 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
TRIO-216ENST00000510757 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
TRIO-216ENST00000510757 WDR62O43379 1518 aa11.88□□□□□ -0.51
TRIO-216ENST00000510757 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
TRIO-216ENST00000510757 MRC2Q9UBG0 1479 aa11.87□□□□□ -0.51
TRIO-216ENST00000510757 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
TRIO-216ENST00000510757 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
TRIO-216ENST00000510757 TOPBP1Q92547 1522 aa11.75□□□□□ -0.53
TRIO-216ENST00000510757 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.53
TRIO-216ENST00000510757 CUX1P39880 1505 aa11.7□□□□□ -0.54
TRIO-216ENST00000510757 ABCC8Q09428 1581 aa11.68□□□□□ -0.54
TRIO-216ENST00000510757 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
TRIO-216ENST00000510757 ZNF608Q9ULD9 1512 aaPredicted RBP11.65□□□□□ -0.54
TRIO-216ENST00000510757 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
TRIO-216ENST00000510757 IFT140Q96RY7 1462 aa11.63□□□□□ -0.55
TRIO-216ENST00000510757 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
TRIO-216ENST00000510757 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
TRIO-216ENST00000510757 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
TRIO-216ENST00000510757 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
TRIO-216ENST00000510757 BIVM-ERCC5R4GMW8 1640 aa11.58□□□□□ -0.56
TRIO-216ENST00000510757 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
TRIO-216ENST00000510757 SOGA1O94964 1423 aa11.57□□□□□ -0.56
TRIO-216ENST00000510757 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
TRIO-216ENST00000510757 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
TRIO-216ENST00000510757 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRIO-216ENST00000510757 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
TRIO-216ENST00000510757 TDRD9Q8NDG6 1382 aaKnown RBP11.52□□□□□ -0.57
TRIO-216ENST00000510757 ABCA10Q8WWZ4 1543 aa11.51□□□□□ -0.57
TRIO-216ENST00000510757 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
TRIO-216ENST00000510757 GAPVD1Q14C86 1478 aa11.43□□□□□ -0.58
TRIO-216ENST00000510757 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
TRIO-216ENST00000510757 CHD1O14646 1710 aa11.42□□□□□ -0.58
TRIO-216ENST00000510757 GRIN2BQ13224 1484 aa11.42□□□□□ -0.58
TRIO-216ENST00000510757 SNAPC4Q5SXM2 1469 aa11.42□□□□□ -0.58
TRIO-216ENST00000510757 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
TRIO-216ENST00000510757 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
TRIO-216ENST00000510757 SYNJ2O15056 1496 aa11.36□□□□□ -0.59
TRIO-216ENST00000510757 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
TRIO-216ENST00000510757 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
TRIO-216ENST00000510757 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
TRIO-216ENST00000510757 IGF1RP08069 1367 aa11.33□□□□□ -0.6
TRIO-216ENST00000510757 RUSC2Q8N2Y8 1516 aa11.31□□□□□ -0.6
TRIO-216ENST00000510757 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
TRIO-216ENST00000510757 GRIN2AQ12879 1464 aa11.3□□□□□ -0.6
TRIO-216ENST00000510757 NUP160Q12769 1436 aa11.29□□□□□ -0.6
TRIO-216ENST00000510757 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
TRIO-216ENST00000510757 RIMBP3CA6NJZ7 1639 aa11.28□□□□□ -0.6
TRIO-216ENST00000510757 RIMBP3BA6NNM3 1639 aa11.28□□□□□ -0.6
TRIO-216ENST00000510757 RIMBP3Q9UFD9 1639 aa11.28□□□□□ -0.6
TRIO-216ENST00000510757 FBLN2P98095 1184 aa11.28□□□□□ -0.6
TRIO-216ENST00000510757 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
TRIO-216ENST00000510757 KIF27Q86VH2 1401 aa11.27□□□□□ -0.6
TRIO-216ENST00000510757 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
TRIO-216ENST00000510757 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
TRIO-216ENST00000510757 CUL7Q14999 1698 aa11.22□□□□□ -0.61
TRIO-216ENST00000510757 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.61
TRIO-216ENST00000510757 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
TRIO-216ENST00000510757 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
TRIO-216ENST00000510757 CARMIL1Q5VZK9 1371 aa11.19□□□□□ -0.62
TRIO-216ENST00000510757 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms