RNA–Protein interactions for RNA: ENST00000510481.5

CCDC110-208, Transcript of coiled-coil domain containing 110, humanhuman

TSL 2

Gene CCDC110, Length 788 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-208ENST00000510481 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
CCDC110-208ENST00000510481 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
CCDC110-208ENST00000510481 ABCC9O60706 1549 aa18.33■□□□□ 0.53
CCDC110-208ENST00000510481 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
CCDC110-208ENST00000510481 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
CCDC110-208ENST00000510481 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
CCDC110-208ENST00000510481 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
CCDC110-208ENST00000510481 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
CCDC110-208ENST00000510481 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC110-208ENST00000510481 NACADO15069 1562 aa17.01■□□□□ 0.31
CCDC110-208ENST00000510481 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
CCDC110-208ENST00000510481 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
CCDC110-208ENST00000510481 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
CCDC110-208ENST00000510481 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
CCDC110-208ENST00000510481 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
CCDC110-208ENST00000510481 CC2D2AQ9P2K1 1620 aa16.53■□□□□ 0.24
CCDC110-208ENST00000510481 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
CCDC110-208ENST00000510481 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
CCDC110-208ENST00000510481 SHROOM4Q9ULL8 1493 aa16.43■□□□□ 0.22
CCDC110-208ENST00000510481 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
CCDC110-208ENST00000510481 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
CCDC110-208ENST00000510481 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
CCDC110-208ENST00000510481 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
CCDC110-208ENST00000510481 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
CCDC110-208ENST00000510481 FOXD1Q16676 465 aa15.95■□□□□ 0.14
CCDC110-208ENST00000510481 CUX2O14529 1486 aa15.88■□□□□ 0.13
CCDC110-208ENST00000510481 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
CCDC110-208ENST00000510481 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
CCDC110-208ENST00000510481 NESP48681 1621 aa15.69■□□□□ 0.1
CCDC110-208ENST00000510481 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
CCDC110-208ENST00000510481 HMGXB3Q12766 1538 aa15.58■□□□□ 0.09
CCDC110-208ENST00000510481 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
CCDC110-208ENST00000510481 SMARCA4P51532 1647 aa15.57■□□□□ 0.08
CCDC110-208ENST00000510481 SMARCA2P51531 1590 aa15.54■□□□□ 0.08
CCDC110-208ENST00000510481 MSH5O43196 834 aa15.5■□□□□ 0.07
CCDC110-208ENST00000510481 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
CCDC110-208ENST00000510481 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
CCDC110-208ENST00000510481 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
CCDC110-208ENST00000510481 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
CCDC110-208ENST00000510481 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
CCDC110-208ENST00000510481 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
CCDC110-208ENST00000510481 MROH2BQ7Z745 1585 aa15.33■□□□□ 0.05
CCDC110-208ENST00000510481 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
CCDC110-208ENST00000510481 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
CCDC110-208ENST00000510481 WDR62O43379 1518 aa15.24■□□□□ 0.03
CCDC110-208ENST00000510481 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
CCDC110-208ENST00000510481 WIZO95785 1651 aa15.13■□□□□ 0.01
CCDC110-208ENST00000510481 CEP164Q9UPV0 1460 aa15.1■□□□□ 0.01
CCDC110-208ENST00000510481 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
CCDC110-208ENST00000510481 OSCARQ8IYS5 282 aa15.07■□□□□ 0
CCDC110-208ENST00000510481 URB2Q14146 1524 aaKnown RBP15.03■□□□□ -0
CCDC110-208ENST00000510481 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
CCDC110-208ENST00000510481 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
CCDC110-208ENST00000510481 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
CCDC110-208ENST00000510481 CFTRP13569 1480 aa15.01□□□□□ -0.01
CCDC110-208ENST00000510481 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
CCDC110-208ENST00000510481 ARHGEF11O15085 1522 aa14.91□□□□□ -0.02
CCDC110-208ENST00000510481 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
CCDC110-208ENST00000510481 RSF1Q96T23 1441 aaPredicted RBP14.86□□□□□ -0.03
CCDC110-208ENST00000510481 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
CCDC110-208ENST00000510481 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
CCDC110-208ENST00000510481 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
CCDC110-208ENST00000510481 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
CCDC110-208ENST00000510481 TOPBP1Q92547 1522 aa14.77□□□□□ -0.04
CCDC110-208ENST00000510481 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
CCDC110-208ENST00000510481 CHD1O14646 1710 aa14.75□□□□□ -0.05
CCDC110-208ENST00000510481 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
CCDC110-208ENST00000510481 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCDC110-208ENST00000510481 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
CCDC110-208ENST00000510481 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
CCDC110-208ENST00000510481 DNMBPQ6XZF7 1577 aa14.66□□□□□ -0.06
CCDC110-208ENST00000510481 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
CCDC110-208ENST00000510481 FBLN2P98095 1184 aa14.6□□□□□ -0.07
CCDC110-208ENST00000510481 POLA1P09884 1462 aaPredicted RBP14.6□□□□□ -0.07
CCDC110-208ENST00000510481 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
CCDC110-208ENST00000510481 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
CCDC110-208ENST00000510481 PIAS4Q8N2W9 510 aaPredicted RBP14.57□□□□□ -0.08
CCDC110-208ENST00000510481 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
CCDC110-208ENST00000510481 SNAPC4Q5SXM2 1469 aa14.53□□□□□ -0.08
CCDC110-208ENST00000510481 SOGA1O94964 1423 aa14.49□□□□□ -0.09
CCDC110-208ENST00000510481 FGD5Q6ZNL6 1462 aa14.45□□□□□ -0.1
CCDC110-208ENST00000510481 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
CCDC110-208ENST00000510481 CUX1P39880 1505 aa14.42□□□□□ -0.1
CCDC110-208ENST00000510481 MAGI1Q96QZ7 1491 aaPredicted RBP14.42□□□□□ -0.1
CCDC110-208ENST00000510481 CHMP7Q8WUX9 453 aaPredicted RBP14.41□□□□□ -0.1
CCDC110-208ENST00000510481 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
CCDC110-208ENST00000510481 SYNJ2O15056 1496 aa14.4□□□□□ -0.1
CCDC110-208ENST00000510481 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
CCDC110-208ENST00000510481 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
CCDC110-208ENST00000510481 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
CCDC110-208ENST00000510481 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
CCDC110-208ENST00000510481 ABCA5Q8WWZ7 1642 aa14.3□□□□□ -0.12
CCDC110-208ENST00000510481 CEP170Q5SW79 1584 aa14.26□□□□□ -0.13
CCDC110-208ENST00000510481 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
CCDC110-208ENST00000510481 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
CCDC110-208ENST00000510481 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
CCDC110-208ENST00000510481 NUP160Q12769 1436 aa14.22□□□□□ -0.13
CCDC110-208ENST00000510481 SHROOM2Q13796 1616 aa14.21□□□□□ -0.13
CCDC110-208ENST00000510481 ADAMTS12P58397 1594 aa14.21□□□□□ -0.14
CCDC110-208ENST00000510481 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms