RNA–Protein interactions for RNA: ENST00000510305.5

PCDH18-204, Transcript of protocadherin 18, humanhuman

TSL 2 BASIC

Gene PCDH18, Length 1,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-204ENST00000510305 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
PCDH18-204ENST00000510305 ABCC9O60706 1549 aa22.98■■□□□ 1.27
PCDH18-204ENST00000510305 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
PCDH18-204ENST00000510305 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
PCDH18-204ENST00000510305 RB1CC1Q8TDY2 1594 aa21.78■■□□□ 1.08
PCDH18-204ENST00000510305 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
PCDH18-204ENST00000510305 NACADO15069 1562 aa21.6■■□□□ 1.05
PCDH18-204ENST00000510305 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
PCDH18-204ENST00000510305 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
PCDH18-204ENST00000510305 UNC13AQ9UPW8 1703 aa21.37■■□□□ 1.01
PCDH18-204ENST00000510305 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
PCDH18-204ENST00000510305 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
PCDH18-204ENST00000510305 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.97
PCDH18-204ENST00000510305 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
PCDH18-204ENST00000510305 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
PCDH18-204ENST00000510305 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
PCDH18-204ENST00000510305 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
PCDH18-204ENST00000510305 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
PCDH18-204ENST00000510305 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
PCDH18-204ENST00000510305 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
PCDH18-204ENST00000510305 DNAJC5Q9H3Z4 198 aa19.99■□□□□ 0.79
PCDH18-204ENST00000510305 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
PCDH18-204ENST00000510305 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
PCDH18-204ENST00000510305 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
PCDH18-204ENST00000510305 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
PCDH18-204ENST00000510305 CUX2O14529 1486 aa19.8■□□□□ 0.76
PCDH18-204ENST00000510305 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
PCDH18-204ENST00000510305 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
PCDH18-204ENST00000510305 NESP48681 1621 aa19.74■□□□□ 0.75
PCDH18-204ENST00000510305 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
PCDH18-204ENST00000510305 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
PCDH18-204ENST00000510305 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
PCDH18-204ENST00000510305 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
PCDH18-204ENST00000510305 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
PCDH18-204ENST00000510305 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.71
PCDH18-204ENST00000510305 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
PCDH18-204ENST00000510305 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
PCDH18-204ENST00000510305 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
PCDH18-204ENST00000510305 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
PCDH18-204ENST00000510305 WIZO95785 1651 aa19.37■□□□□ 0.69
PCDH18-204ENST00000510305 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
PCDH18-204ENST00000510305 MRC2Q9UBG0 1479 aa19.25■□□□□ 0.67
PCDH18-204ENST00000510305 WDR62O43379 1518 aa19.21■□□□□ 0.67
PCDH18-204ENST00000510305 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.66
PCDH18-204ENST00000510305 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
PCDH18-204ENST00000510305 CFTRP13569 1480 aa19.11■□□□□ 0.65
PCDH18-204ENST00000510305 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
PCDH18-204ENST00000510305 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
PCDH18-204ENST00000510305 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
PCDH18-204ENST00000510305 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
PCDH18-204ENST00000510305 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
PCDH18-204ENST00000510305 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
PCDH18-204ENST00000510305 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
PCDH18-204ENST00000510305 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
PCDH18-204ENST00000510305 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
PCDH18-204ENST00000510305 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
PCDH18-204ENST00000510305 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
PCDH18-204ENST00000510305 RIMBP3CA6NJZ7 1639 aa18.69■□□□□ 0.58
PCDH18-204ENST00000510305 RIMBP3BA6NNM3 1639 aa18.69■□□□□ 0.58
PCDH18-204ENST00000510305 RIMBP3Q9UFD9 1639 aa18.69■□□□□ 0.58
PCDH18-204ENST00000510305 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
PCDH18-204ENST00000510305 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
PCDH18-204ENST00000510305 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
PCDH18-204ENST00000510305 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
PCDH18-204ENST00000510305 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
PCDH18-204ENST00000510305 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
PCDH18-204ENST00000510305 CHD1O14646 1710 aa18.57■□□□□ 0.56
PCDH18-204ENST00000510305 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
PCDH18-204ENST00000510305 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
PCDH18-204ENST00000510305 CYB5RLQ6IPT4 315 aa18.51■□□□□ 0.55
PCDH18-204ENST00000510305 FBLN2P98095 1184 aa18.5■□□□□ 0.55
PCDH18-204ENST00000510305 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
PCDH18-204ENST00000510305 SOGA1O94964 1423 aa18.48■□□□□ 0.55
PCDH18-204ENST00000510305 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
PCDH18-204ENST00000510305 ARAP1Q96P48 1450 aa18.43■□□□□ 0.54
PCDH18-204ENST00000510305 CUX1P39880 1505 aa18.42■□□□□ 0.54
PCDH18-204ENST00000510305 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
PCDH18-204ENST00000510305 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
PCDH18-204ENST00000510305 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
PCDH18-204ENST00000510305 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
PCDH18-204ENST00000510305 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.52
PCDH18-204ENST00000510305 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
PCDH18-204ENST00000510305 MAGI1Q96QZ7 1491 aaPredicted RBP18.31■□□□□ 0.52
PCDH18-204ENST00000510305 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
PCDH18-204ENST00000510305 SYNJ1O43426 1573 aa18.27■□□□□ 0.52
PCDH18-204ENST00000510305 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
PCDH18-204ENST00000510305 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PCDH18-204ENST00000510305 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
PCDH18-204ENST00000510305 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
PCDH18-204ENST00000510305 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
PCDH18-204ENST00000510305 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
PCDH18-204ENST00000510305 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
PCDH18-204ENST00000510305 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
PCDH18-204ENST00000510305 GRIN2AQ12879 1464 aa18.08■□□□□ 0.49
PCDH18-204ENST00000510305 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.49
PCDH18-204ENST00000510305 EEA1Q15075 1411 aa18.07■□□□□ 0.48
PCDH18-204ENST00000510305 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
PCDH18-204ENST00000510305 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
PCDH18-204ENST00000510305 NUP160Q12769 1436 aa18.03■□□□□ 0.48
PCDH18-204ENST00000510305 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms