RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 NISCHQ9Y2I1 1504 aa49.95■■■■■ 5.59
TRIO-215ENST00000510281 ABCC9O60706 1549 aa45.23■■■■■ 4.83
TRIO-215ENST00000510281 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
TRIO-215ENST00000510281 RB1CC1Q8TDY2 1594 aa42.95■■■■■ 4.47
TRIO-215ENST00000510281 DNAJC5BQ9UF47 199 aa42.78■■■■■ 4.44
TRIO-215ENST00000510281 NACADO15069 1562 aa42.61■■■■■ 4.41
TRIO-215ENST00000510281 DCAF8L2P0C7V8 631 aa42.15■■■■■ 4.34
TRIO-215ENST00000510281 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
TRIO-215ENST00000510281 MYO15BQ96JP2 1530 aa41.99■■■■■ 4.31
TRIO-215ENST00000510281 UNC13AQ9UPW8 1703 aa41.87■■■■■ 4.29
TRIO-215ENST00000510281 BICRAQ9NZM4 1560 aa41.73■■■■■ 4.27
TRIO-215ENST00000510281 ZCCHC6Q5VYS8 1495 aaKnown RBP41.34■■■■■ 4.21
TRIO-215ENST00000510281 DCAF1Q9Y4B6 1507 aa41.3■■■■■ 4.2
TRIO-215ENST00000510281 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
TRIO-215ENST00000510281 SCRIBQ14160 1630 aa40.86■■■■■ 4.13
TRIO-215ENST00000510281 CC2D2AQ9P2K1 1620 aa40.86■■■■■ 4.13
TRIO-215ENST00000510281 CECR2Q9BXF3 1484 aa40.83■■■■■ 4.13
TRIO-215ENST00000510281 EIF4G1Q04637 1599 aaKnown RBP40.72■■■■■ 4.11
TRIO-215ENST00000510281 DNAJC5Q9H3Z4 198 aa39.56■■■■□ 3.92
TRIO-215ENST00000510281 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
TRIO-215ENST00000510281 CUX2O14529 1486 aa39.21■■■■□ 3.87
TRIO-215ENST00000510281 ATAD2BQ9ULI0 1458 aa39.17■■■■□ 3.86
TRIO-215ENST00000510281 ERCC6Q03468 1493 aa39.08■■■■□ 3.85
TRIO-215ENST00000510281 HMGXB3Q12766 1538 aa39.03■■■■□ 3.84
TRIO-215ENST00000510281 SMARCA2P51531 1590 aa39.03■■■■□ 3.84
TRIO-215ENST00000510281 SMARCA4P51532 1647 aa39■■■■□ 3.83
TRIO-215ENST00000510281 BAZ1AQ9NRL2 1556 aaPredicted RBP38.78■■■■□ 3.8
TRIO-215ENST00000510281 NESP48681 1621 aa38.76■■■■□ 3.8
TRIO-215ENST00000510281 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
TRIO-215ENST00000510281 PEG3Q9GZU2 1588 aa38.7■■■■□ 3.79
TRIO-215ENST00000510281 LAMC3Q9Y6N6 1575 aa38.48■■■■□ 3.75
TRIO-215ENST00000510281 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
TRIO-215ENST00000510281 MROH2BQ7Z745 1585 aa38.45■■■■□ 3.75
TRIO-215ENST00000510281 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
TRIO-215ENST00000510281 KIF21AQ7Z4S6 1674 aa38.2■■■■□ 3.71
TRIO-215ENST00000510281 CADPSQ9ULU8 1353 aa38.14■■■■□ 3.7
TRIO-215ENST00000510281 MRC2Q9UBG0 1479 aa37.97■■■■□ 3.67
TRIO-215ENST00000510281 WIZO95785 1651 aa37.92■■■■□ 3.66
TRIO-215ENST00000510281 WDR62O43379 1518 aa37.91■■■■□ 3.66
TRIO-215ENST00000510281 CEP164Q9UPV0 1460 aa37.73■■■■□ 3.63
TRIO-215ENST00000510281 FANCD2Q9BXW9 1451 aa37.66■■■■□ 3.62
TRIO-215ENST00000510281 CFTRP13569 1480 aa37.64■■■■□ 3.62
TRIO-215ENST00000510281 RSF1Q96T23 1441 aaPredicted RBP37.56■■■■□ 3.6
TRIO-215ENST00000510281 TRIM41Q8WV44 630 aa37.56■■■■□ 3.6
TRIO-215ENST00000510281 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
TRIO-215ENST00000510281 AEBP2Q6ZN18 517 aaPredicted RBP37.4■■■■□ 3.58
TRIO-215ENST00000510281 URB2Q14146 1524 aaKnown RBP37.38■■■■□ 3.57
TRIO-215ENST00000510281 OSCARQ8IYS5 282 aa37.32■■■■□ 3.56
TRIO-215ENST00000510281 PRDM2Q13029 1718 aa37.1■■■■□ 3.53
TRIO-215ENST00000510281 CCDC88BA6NC98 1476 aa37.06■■■■□ 3.52
TRIO-215ENST00000510281 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
TRIO-215ENST00000510281 ZNF608Q9ULD9 1512 aaPredicted RBP36.97■■■■□ 3.51
TRIO-215ENST00000510281 TOPBP1Q92547 1522 aa36.92■■■■□ 3.5
TRIO-215ENST00000510281 ABCC8Q09428 1581 aa36.85■■■■□ 3.49
TRIO-215ENST00000510281 RIMBP3CA6NJZ7 1639 aa36.84■■■■□ 3.49
TRIO-215ENST00000510281 RIMBP3BA6NNM3 1639 aa36.84■■■■□ 3.49
TRIO-215ENST00000510281 RIMBP3Q9UFD9 1639 aa36.84■■■■□ 3.49
TRIO-215ENST00000510281 DNMBPQ6XZF7 1577 aa36.75■■■■□ 3.47
TRIO-215ENST00000510281 ARHGEF11O15085 1522 aa36.73■■■■□ 3.47
TRIO-215ENST00000510281 EIF4G3O43432 1585 aaKnown RBP36.73■■■■□ 3.47
TRIO-215ENST00000510281 TARBP1Q13395 1621 aaKnown RBP36.61■■■■□ 3.45
TRIO-215ENST00000510281 AQRO60306 1485 aaKnown RBP eCLIP36.58■■■■□ 3.45
TRIO-215ENST00000510281 POLA1P09884 1462 aaPredicted RBP36.53■■■■□ 3.44
TRIO-215ENST00000510281 CHD1O14646 1710 aa36.45■■■■□ 3.43
TRIO-215ENST00000510281 CYB5RLQ6IPT4 315 aa36.43■■■■□ 3.42
TRIO-215ENST00000510281 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
TRIO-215ENST00000510281 ARAP1Q96P48 1450 aa36.35■■■■□ 3.41
TRIO-215ENST00000510281 SOGA1O94964 1423 aa36.34■■■■□ 3.41
TRIO-215ENST00000510281 FBLN2P98095 1184 aa36.33■■■■□ 3.41
TRIO-215ENST00000510281 SUPT5HO00267 1087 aaKnown RBP36.3■■■■□ 3.4
TRIO-215ENST00000510281 TDRD9Q8NDG6 1382 aaKnown RBP36.29■■■■□ 3.4
TRIO-215ENST00000510281 WDR97A6NE52 1622 aa36.26■■■■□ 3.4
TRIO-215ENST00000510281 FGD5Q6ZNL6 1462 aa36.23■■■■□ 3.39
TRIO-215ENST00000510281 SNAPC4Q5SXM2 1469 aa36.2■■■■□ 3.39
TRIO-215ENST00000510281 CUX1P39880 1505 aa36.15■■■■□ 3.38
TRIO-215ENST00000510281 CLASP1Q7Z460 1538 aa36.14■■■■□ 3.38
TRIO-215ENST00000510281 MAGI1Q96QZ7 1491 aaPredicted RBP36.13■■■■□ 3.37
TRIO-215ENST00000510281 GRIN2BQ13224 1484 aa36.08■■■■□ 3.37
TRIO-215ENST00000510281 TRHP20396 242 aaPredicted RBP36.08■■■■□ 3.37
TRIO-215ENST00000510281 CHMP7Q8WUX9 453 aaPredicted RBP36.07■■■■□ 3.36
TRIO-215ENST00000510281 SYNJ1O43426 1573 aa36.06■■■■□ 3.36
TRIO-215ENST00000510281 SYNJ2O15056 1496 aa36.01■■■■□ 3.36
TRIO-215ENST00000510281 CHIC1Q5VXU3 224 aa35.95■■■■□ 3.35
TRIO-215ENST00000510281 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
TRIO-215ENST00000510281 ABCA10Q8WWZ4 1543 aa35.85■■■■□ 3.33
TRIO-215ENST00000510281 PBRM1Q86U86 1689 aa35.82■■■■□ 3.33
TRIO-215ENST00000510281 ABCA5Q8WWZ7 1642 aa35.79■■■■□ 3.32
TRIO-215ENST00000510281 GRIN2AQ12879 1464 aa35.61■■■■□ 3.29
TRIO-215ENST00000510281 WRNQ14191 1432 aaPredicted RBP eCLIP35.6■■■■□ 3.29
TRIO-215ENST00000510281 NUP160Q12769 1436 aa35.55■■■■□ 3.28
TRIO-215ENST00000510281 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
TRIO-215ENST00000510281 ERCC6L2Q5T890 1561 aa35.5■■■■□ 3.27
TRIO-215ENST00000510281 CEP170Q5SW79 1584 aa35.48■■■■□ 3.27
TRIO-215ENST00000510281 TOP2BQ02880 1626 aa35.48■■■■□ 3.27
TRIO-215ENST00000510281 BIVM-ERCC5R4GMW8 1640 aa35.47■■■■□ 3.27
TRIO-215ENST00000510281 FHAD1B1AJZ9 1412 aa35.45■■■■□ 3.27
TRIO-215ENST00000510281 SHROOM2Q13796 1616 aa35.39■■■■□ 3.26
TRIO-215ENST00000510281 ERICH3Q5RHP9 1530 aa35.38■■■■□ 3.25
TRIO-215ENST00000510281 PRG4Q92954 1404 aaPredicted RBP35.17■■■■□ 3.22
TRIO-215ENST00000510281 JPH4Q96JJ6 628 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms