RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
SMAD5-206ENST00000509962 ABCC9O60706 1549 aa33.38■■■□□ 2.93
SMAD5-206ENST00000509962 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
SMAD5-206ENST00000509962 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
SMAD5-206ENST00000509962 DCAF8L2P0C7V8 631 aa31.53■■■□□ 2.64
SMAD5-206ENST00000509962 NACADO15069 1562 aa31.5■■■□□ 2.63
SMAD5-206ENST00000509962 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
SMAD5-206ENST00000509962 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
SMAD5-206ENST00000509962 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
SMAD5-206ENST00000509962 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.55
SMAD5-206ENST00000509962 BICRAQ9NZM4 1560 aa30.76■■■□□ 2.52
SMAD5-206ENST00000509962 ZCCHC6Q5VYS8 1495 aaKnown RBP30.66■■■□□ 2.5
SMAD5-206ENST00000509962 DCAF1Q9Y4B6 1507 aa30.59■■■□□ 2.49
SMAD5-206ENST00000509962 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
SMAD5-206ENST00000509962 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
SMAD5-206ENST00000509962 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
SMAD5-206ENST00000509962 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
SMAD5-206ENST00000509962 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
SMAD5-206ENST00000509962 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
SMAD5-206ENST00000509962 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
SMAD5-206ENST00000509962 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
SMAD5-206ENST00000509962 SMARCA2P51531 1590 aa28.91■■■□□ 2.22
SMAD5-206ENST00000509962 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
SMAD5-206ENST00000509962 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
SMAD5-206ENST00000509962 HMGXB3Q12766 1538 aa28.82■■■□□ 2.2
SMAD5-206ENST00000509962 CUX2O14529 1486 aa28.78■■■□□ 2.2
SMAD5-206ENST00000509962 BAZ1AQ9NRL2 1556 aaPredicted RBP28.78■■■□□ 2.2
SMAD5-206ENST00000509962 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
SMAD5-206ENST00000509962 NESP48681 1621 aa28.65■■■□□ 2.18
SMAD5-206ENST00000509962 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
SMAD5-206ENST00000509962 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
SMAD5-206ENST00000509962 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
SMAD5-206ENST00000509962 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
SMAD5-206ENST00000509962 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
SMAD5-206ENST00000509962 KIF21AQ7Z4S6 1674 aa28.24■■■□□ 2.11
SMAD5-206ENST00000509962 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
SMAD5-206ENST00000509962 WIZO95785 1651 aa28.21■■■□□ 2.11
SMAD5-206ENST00000509962 MRC2Q9UBG0 1479 aa28.03■■■□□ 2.08
SMAD5-206ENST00000509962 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
SMAD5-206ENST00000509962 WDR62O43379 1518 aa27.92■■■□□ 2.06
SMAD5-206ENST00000509962 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
SMAD5-206ENST00000509962 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.05
SMAD5-206ENST00000509962 CFTRP13569 1480 aa27.86■■■□□ 2.05
SMAD5-206ENST00000509962 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
SMAD5-206ENST00000509962 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
SMAD5-206ENST00000509962 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
SMAD5-206ENST00000509962 OSCARQ8IYS5 282 aa27.6■■■□□ 2.01
SMAD5-206ENST00000509962 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
SMAD5-206ENST00000509962 PRDM2Q13029 1718 aa27.52■■■□□ 2
SMAD5-206ENST00000509962 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
SMAD5-206ENST00000509962 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
SMAD5-206ENST00000509962 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
SMAD5-206ENST00000509962 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
SMAD5-206ENST00000509962 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
SMAD5-206ENST00000509962 EIF4G3O43432 1585 aaKnown RBP27.12■■□□□ 1.93
SMAD5-206ENST00000509962 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.93
SMAD5-206ENST00000509962 RIMBP3CA6NJZ7 1639 aa27.09■■□□□ 1.93
SMAD5-206ENST00000509962 RIMBP3BA6NNM3 1639 aa27.09■■□□□ 1.93
SMAD5-206ENST00000509962 RIMBP3Q9UFD9 1639 aa27.09■■□□□ 1.93
SMAD5-206ENST00000509962 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
SMAD5-206ENST00000509962 FBLN2P98095 1184 aa27.05■■□□□ 1.92
SMAD5-206ENST00000509962 POLA1P09884 1462 aaPredicted RBP27.05■■□□□ 1.92
SMAD5-206ENST00000509962 ARHGEF11O15085 1522 aa27■■□□□ 1.91
SMAD5-206ENST00000509962 SOGA1O94964 1423 aa26.99■■□□□ 1.91
SMAD5-206ENST00000509962 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
SMAD5-206ENST00000509962 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
SMAD5-206ENST00000509962 CHD1O14646 1710 aa26.95■■□□□ 1.9
SMAD5-206ENST00000509962 TDRD9Q8NDG6 1382 aaKnown RBP26.95■■□□□ 1.9
SMAD5-206ENST00000509962 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
SMAD5-206ENST00000509962 CUX1P39880 1505 aa26.82■■□□□ 1.88
SMAD5-206ENST00000509962 CHMP7Q8WUX9 453 aaPredicted RBP26.82■■□□□ 1.88
SMAD5-206ENST00000509962 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
SMAD5-206ENST00000509962 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
SMAD5-206ENST00000509962 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
SMAD5-206ENST00000509962 GRIN2BQ13224 1484 aa26.73■■□□□ 1.87
SMAD5-206ENST00000509962 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
SMAD5-206ENST00000509962 MAGI1Q96QZ7 1491 aaPredicted RBP26.71■■□□□ 1.87
SMAD5-206ENST00000509962 TRHP20396 242 aaPredicted RBP26.71■■□□□ 1.87
SMAD5-206ENST00000509962 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
SMAD5-206ENST00000509962 GAPVD1Q14C86 1478 aa26.64■■□□□ 1.86
SMAD5-206ENST00000509962 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
SMAD5-206ENST00000509962 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
SMAD5-206ENST00000509962 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
SMAD5-206ENST00000509962 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
SMAD5-206ENST00000509962 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
SMAD5-206ENST00000509962 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
SMAD5-206ENST00000509962 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
SMAD5-206ENST00000509962 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
SMAD5-206ENST00000509962 BIVM-ERCC5R4GMW8 1640 aa26.36■■□□□ 1.81
SMAD5-206ENST00000509962 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
SMAD5-206ENST00000509962 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
SMAD5-206ENST00000509962 NUP160Q12769 1436 aa26.26■■□□□ 1.79
SMAD5-206ENST00000509962 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
SMAD5-206ENST00000509962 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
SMAD5-206ENST00000509962 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
SMAD5-206ENST00000509962 SHROOM2Q13796 1616 aa26.13■■□□□ 1.77
SMAD5-206ENST00000509962 JPH4Q96JJ6 628 aa26.12■■□□□ 1.77
SMAD5-206ENST00000509962 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
SMAD5-206ENST00000509962 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
SMAD5-206ENST00000509962 NPM1P06748 294 aaKnown RBP eCLIP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms