RNA–Protein interactions for RNA: ENST00000509678.1

CHIC2-202, Transcript of cysteine rich hydrophobic domain 2, humanhuman

TSL 2

Gene CHIC2, Length 462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC2-202ENST00000509678 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
CHIC2-202ENST00000509678 ABCC9O60706 1549 aa25.95■■□□□ 1.74
CHIC2-202ENST00000509678 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
CHIC2-202ENST00000509678 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
CHIC2-202ENST00000509678 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
CHIC2-202ENST00000509678 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
CHIC2-202ENST00000509678 NACADO15069 1562 aa24.12■■□□□ 1.45
CHIC2-202ENST00000509678 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
CHIC2-202ENST00000509678 UNC13AQ9UPW8 1703 aa24.04■■□□□ 1.44
CHIC2-202ENST00000509678 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
CHIC2-202ENST00000509678 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
CHIC2-202ENST00000509678 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
CHIC2-202ENST00000509678 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
CHIC2-202ENST00000509678 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
CHIC2-202ENST00000509678 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
CHIC2-202ENST00000509678 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
CHIC2-202ENST00000509678 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
CHIC2-202ENST00000509678 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
CHIC2-202ENST00000509678 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
CHIC2-202ENST00000509678 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
CHIC2-202ENST00000509678 DCAF1Q9Y4B6 1507 aa23.07■■□□□ 1.28
CHIC2-202ENST00000509678 CUX2O14529 1486 aa22.54■■□□□ 1.2
CHIC2-202ENST00000509678 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
CHIC2-202ENST00000509678 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
CHIC2-202ENST00000509678 NESP48681 1621 aa22.15■■□□□ 1.14
CHIC2-202ENST00000509678 ATAD2BQ9ULI0 1458 aa22.12■■□□□ 1.13
CHIC2-202ENST00000509678 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
CHIC2-202ENST00000509678 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
CHIC2-202ENST00000509678 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
CHIC2-202ENST00000509678 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
CHIC2-202ENST00000509678 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
CHIC2-202ENST00000509678 KIF21AQ7Z4S6 1674 aa21.92■■□□□ 1.1
CHIC2-202ENST00000509678 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
CHIC2-202ENST00000509678 LAMC3Q9Y6N6 1575 aa21.89■■□□□ 1.09
CHIC2-202ENST00000509678 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
CHIC2-202ENST00000509678 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
CHIC2-202ENST00000509678 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
CHIC2-202ENST00000509678 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
CHIC2-202ENST00000509678 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
CHIC2-202ENST00000509678 WDR62O43379 1518 aa21.56■■□□□ 1.04
CHIC2-202ENST00000509678 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
CHIC2-202ENST00000509678 OSCARQ8IYS5 282 aa21.42■■□□□ 1.02
CHIC2-202ENST00000509678 CEP164Q9UPV0 1460 aa21.42■■□□□ 1.02
CHIC2-202ENST00000509678 WIZO95785 1651 aa21.4■■□□□ 1.02
CHIC2-202ENST00000509678 FANCD2Q9BXW9 1451 aa21.34■■□□□ 1.01
CHIC2-202ENST00000509678 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
CHIC2-202ENST00000509678 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
CHIC2-202ENST00000509678 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
CHIC2-202ENST00000509678 URB2Q14146 1524 aaKnown RBP21.2■□□□□ 0.98
CHIC2-202ENST00000509678 CFTRP13569 1480 aa21.19■□□□□ 0.98
CHIC2-202ENST00000509678 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
CHIC2-202ENST00000509678 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
CHIC2-202ENST00000509678 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
CHIC2-202ENST00000509678 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
CHIC2-202ENST00000509678 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
CHIC2-202ENST00000509678 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
CHIC2-202ENST00000509678 TRHP20396 242 aaPredicted RBP20.97■□□□□ 0.95
CHIC2-202ENST00000509678 CHD1O14646 1710 aa20.95■□□□□ 0.94
CHIC2-202ENST00000509678 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
CHIC2-202ENST00000509678 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
CHIC2-202ENST00000509678 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
CHIC2-202ENST00000509678 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
CHIC2-202ENST00000509678 ARAP1Q96P48 1450 aa20.86■□□□□ 0.93
CHIC2-202ENST00000509678 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
CHIC2-202ENST00000509678 FBLN2P98095 1184 aa20.79■□□□□ 0.92
CHIC2-202ENST00000509678 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
CHIC2-202ENST00000509678 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
CHIC2-202ENST00000509678 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
CHIC2-202ENST00000509678 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
CHIC2-202ENST00000509678 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
CHIC2-202ENST00000509678 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
CHIC2-202ENST00000509678 RAD54L2Q9Y4B4 1467 aa20.59■□□□□ 0.89
CHIC2-202ENST00000509678 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
CHIC2-202ENST00000509678 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
CHIC2-202ENST00000509678 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
CHIC2-202ENST00000509678 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
CHIC2-202ENST00000509678 SOGA1O94964 1423 aa20.53■□□□□ 0.88
CHIC2-202ENST00000509678 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
CHIC2-202ENST00000509678 WDR97A6NE52 1622 aa20.47■□□□□ 0.87
CHIC2-202ENST00000509678 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
CHIC2-202ENST00000509678 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
CHIC2-202ENST00000509678 PBRM1Q86U86 1689 aa20.41■□□□□ 0.86
CHIC2-202ENST00000509678 GRIN2BQ13224 1484 aa20.4■□□□□ 0.86
CHIC2-202ENST00000509678 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
CHIC2-202ENST00000509678 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
CHIC2-202ENST00000509678 CUX1P39880 1505 aa20.33■□□□□ 0.85
CHIC2-202ENST00000509678 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.84
CHIC2-202ENST00000509678 KIF13AQ9H1H9 1805 aa20.23■□□□□ 0.83
CHIC2-202ENST00000509678 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
CHIC2-202ENST00000509678 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
CHIC2-202ENST00000509678 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
CHIC2-202ENST00000509678 ABCA10Q8WWZ4 1543 aa20.14■□□□□ 0.81
CHIC2-202ENST00000509678 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
CHIC2-202ENST00000509678 SHROOM2Q13796 1616 aa20.09■□□□□ 0.81
CHIC2-202ENST00000509678 NUP160Q12769 1436 aa20.07■□□□□ 0.8
CHIC2-202ENST00000509678 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
CHIC2-202ENST00000509678 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
CHIC2-202ENST00000509678 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
CHIC2-202ENST00000509678 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
CHIC2-202ENST00000509678 TSPOAP1O95153 1857 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms