RNA–Protein interactions for RNA: ENST00000509652.1

SNCAIP-213, Transcript of synuclein alpha interacting protein, humanhuman

TSL 4

Gene SNCAIP, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-213ENST00000509652 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
SNCAIP-213ENST00000509652 ABCC9O60706 1549 aa17.67■□□□□ 0.42
SNCAIP-213ENST00000509652 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
SNCAIP-213ENST00000509652 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
SNCAIP-213ENST00000509652 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
SNCAIP-213ENST00000509652 NACADO15069 1562 aa16.55■□□□□ 0.24
SNCAIP-213ENST00000509652 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
SNCAIP-213ENST00000509652 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
SNCAIP-213ENST00000509652 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNCAIP-213ENST00000509652 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
SNCAIP-213ENST00000509652 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
SNCAIP-213ENST00000509652 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
SNCAIP-213ENST00000509652 CC2D2AQ9P2K1 1620 aa15.99■□□□□ 0.15
SNCAIP-213ENST00000509652 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
SNCAIP-213ENST00000509652 EIF4G1Q04637 1599 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-213ENST00000509652 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
SNCAIP-213ENST00000509652 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
SNCAIP-213ENST00000509652 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
SNCAIP-213ENST00000509652 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
SNCAIP-213ENST00000509652 CUX2O14529 1486 aa15.44■□□□□ 0.06
SNCAIP-213ENST00000509652 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
SNCAIP-213ENST00000509652 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
SNCAIP-213ENST00000509652 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
SNCAIP-213ENST00000509652 HMGXB3Q12766 1538 aa15.12■□□□□ 0.01
SNCAIP-213ENST00000509652 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
SNCAIP-213ENST00000509652 SMARCA4P51532 1647 aa15.06■□□□□ 0
SNCAIP-213ENST00000509652 NESP48681 1621 aa15.06■□□□□ 0
SNCAIP-213ENST00000509652 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
SNCAIP-213ENST00000509652 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
SNCAIP-213ENST00000509652 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
SNCAIP-213ENST00000509652 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
SNCAIP-213ENST00000509652 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.01
SNCAIP-213ENST00000509652 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
SNCAIP-213ENST00000509652 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
SNCAIP-213ENST00000509652 PEG3Q9GZU2 1588 aa14.91□□□□□ -0.02
SNCAIP-213ENST00000509652 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
SNCAIP-213ENST00000509652 WDR62O43379 1518 aa14.75□□□□□ -0.05
SNCAIP-213ENST00000509652 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
SNCAIP-213ENST00000509652 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
SNCAIP-213ENST00000509652 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
SNCAIP-213ENST00000509652 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
SNCAIP-213ENST00000509652 WIZO95785 1651 aa14.59□□□□□ -0.07
SNCAIP-213ENST00000509652 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
SNCAIP-213ENST00000509652 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
SNCAIP-213ENST00000509652 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
SNCAIP-213ENST00000509652 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
SNCAIP-213ENST00000509652 CFTRP13569 1480 aa14.5□□□□□ -0.09
SNCAIP-213ENST00000509652 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
SNCAIP-213ENST00000509652 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.1
SNCAIP-213ENST00000509652 ARHGEF11O15085 1522 aa14.41□□□□□ -0.1
SNCAIP-213ENST00000509652 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
SNCAIP-213ENST00000509652 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
SNCAIP-213ENST00000509652 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
SNCAIP-213ENST00000509652 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
SNCAIP-213ENST00000509652 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
SNCAIP-213ENST00000509652 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
SNCAIP-213ENST00000509652 CHD1O14646 1710 aa14.3□□□□□ -0.12
SNCAIP-213ENST00000509652 EIF4G3O43432 1585 aaKnown RBP14.3□□□□□ -0.12
SNCAIP-213ENST00000509652 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
SNCAIP-213ENST00000509652 TOPBP1Q92547 1522 aa14.27□□□□□ -0.12
SNCAIP-213ENST00000509652 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
SNCAIP-213ENST00000509652 AEBP2Q6ZN18 517 aaPredicted RBP14.21□□□□□ -0.13
SNCAIP-213ENST00000509652 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
SNCAIP-213ENST00000509652 FBLN2P98095 1184 aa14.2□□□□□ -0.14
SNCAIP-213ENST00000509652 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
SNCAIP-213ENST00000509652 TARBP1Q13395 1621 aaKnown RBP14.18□□□□□ -0.14
SNCAIP-213ENST00000509652 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.14
SNCAIP-213ENST00000509652 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
SNCAIP-213ENST00000509652 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
SNCAIP-213ENST00000509652 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
SNCAIP-213ENST00000509652 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
SNCAIP-213ENST00000509652 CHMP7Q8WUX9 453 aaPredicted RBP14.05□□□□□ -0.16
SNCAIP-213ENST00000509652 SOGA1O94964 1423 aa14.05□□□□□ -0.16
SNCAIP-213ENST00000509652 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
SNCAIP-213ENST00000509652 MAGI1Q96QZ7 1491 aaPredicted RBP14.03□□□□□ -0.16
SNCAIP-213ENST00000509652 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
SNCAIP-213ENST00000509652 TDRD9Q8NDG6 1382 aaKnown RBP14.02□□□□□ -0.17
SNCAIP-213ENST00000509652 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
SNCAIP-213ENST00000509652 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
SNCAIP-213ENST00000509652 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
SNCAIP-213ENST00000509652 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
SNCAIP-213ENST00000509652 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
SNCAIP-213ENST00000509652 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
SNCAIP-213ENST00000509652 CUX1P39880 1505 aa13.87□□□□□ -0.19
SNCAIP-213ENST00000509652 ABCA5Q8WWZ7 1642 aa13.82□□□□□ -0.2
SNCAIP-213ENST00000509652 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
SNCAIP-213ENST00000509652 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
SNCAIP-213ENST00000509652 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
SNCAIP-213ENST00000509652 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
SNCAIP-213ENST00000509652 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
SNCAIP-213ENST00000509652 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
SNCAIP-213ENST00000509652 ADAMTS12P58397 1594 aa13.73□□□□□ -0.21
SNCAIP-213ENST00000509652 NUP160Q12769 1436 aa13.72□□□□□ -0.21
SNCAIP-213ENST00000509652 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
SNCAIP-213ENST00000509652 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
SNCAIP-213ENST00000509652 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
SNCAIP-213ENST00000509652 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
SNCAIP-213ENST00000509652 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
SNCAIP-213ENST00000509652 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
SNCAIP-213ENST00000509652 FAM69CQ0P6D2 419 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms