RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
SIL1-212ENST00000509400 ABCC9O60706 1549 aa24.79■■□□□ 1.56
SIL1-212ENST00000509400 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
SIL1-212ENST00000509400 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
SIL1-212ENST00000509400 RB1CC1Q8TDY2 1594 aa23.39■■□□□ 1.33
SIL1-212ENST00000509400 NACADO15069 1562 aa23.16■■□□□ 1.3
SIL1-212ENST00000509400 PABPN1Q86U42 306 aaKnown RBP eCLIP23.05■■□□□ 1.28
SIL1-212ENST00000509400 DCAF8L2P0C7V8 631 aa23■■□□□ 1.27
SIL1-212ENST00000509400 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
SIL1-212ENST00000509400 BICRAQ9NZM4 1560 aa22.83■■□□□ 1.25
SIL1-212ENST00000509400 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
SIL1-212ENST00000509400 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
SIL1-212ENST00000509400 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
SIL1-212ENST00000509400 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
SIL1-212ENST00000509400 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
SIL1-212ENST00000509400 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
SIL1-212ENST00000509400 SCRIBQ14160 1630 aa22.29■■□□□ 1.16
SIL1-212ENST00000509400 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
SIL1-212ENST00000509400 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
SIL1-212ENST00000509400 CUX2O14529 1486 aa21.42■■□□□ 1.02
SIL1-212ENST00000509400 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
SIL1-212ENST00000509400 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
SIL1-212ENST00000509400 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
SIL1-212ENST00000509400 NESP48681 1621 aa21.24■□□□□ 0.99
SIL1-212ENST00000509400 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
SIL1-212ENST00000509400 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
SIL1-212ENST00000509400 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
SIL1-212ENST00000509400 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
SIL1-212ENST00000509400 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
SIL1-212ENST00000509400 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
SIL1-212ENST00000509400 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
SIL1-212ENST00000509400 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
SIL1-212ENST00000509400 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
SIL1-212ENST00000509400 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
SIL1-212ENST00000509400 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
SIL1-212ENST00000509400 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
SIL1-212ENST00000509400 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
SIL1-212ENST00000509400 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
SIL1-212ENST00000509400 RSF1Q96T23 1441 aaPredicted RBP20.68■□□□□ 0.9
SIL1-212ENST00000509400 WDR62O43379 1518 aa20.67■□□□□ 0.9
SIL1-212ENST00000509400 WIZO95785 1651 aa20.67■□□□□ 0.9
SIL1-212ENST00000509400 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
SIL1-212ENST00000509400 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
SIL1-212ENST00000509400 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
SIL1-212ENST00000509400 CFTRP13569 1480 aa20.46■□□□□ 0.87
SIL1-212ENST00000509400 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
SIL1-212ENST00000509400 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
SIL1-212ENST00000509400 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
SIL1-212ENST00000509400 RIMBP3CA6NJZ7 1639 aa20.22■□□□□ 0.83
SIL1-212ENST00000509400 RIMBP3BA6NNM3 1639 aa20.22■□□□□ 0.83
SIL1-212ENST00000509400 RIMBP3Q9UFD9 1639 aa20.22■□□□□ 0.83
SIL1-212ENST00000509400 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
SIL1-212ENST00000509400 PRDM2Q13029 1718 aa20.2■□□□□ 0.82
SIL1-212ENST00000509400 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
SIL1-212ENST00000509400 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
SIL1-212ENST00000509400 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
SIL1-212ENST00000509400 TOPBP1Q92547 1522 aa20.11■□□□□ 0.81
SIL1-212ENST00000509400 EIF4G3O43432 1585 aaKnown RBP20.05■□□□□ 0.8
SIL1-212ENST00000509400 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.79
SIL1-212ENST00000509400 CYB5RLQ6IPT4 315 aa19.98■□□□□ 0.79
SIL1-212ENST00000509400 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
SIL1-212ENST00000509400 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
SIL1-212ENST00000509400 CHD1O14646 1710 aa19.96■□□□□ 0.79
SIL1-212ENST00000509400 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
SIL1-212ENST00000509400 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
SIL1-212ENST00000509400 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
SIL1-212ENST00000509400 FBLN2P98095 1184 aa19.86■□□□□ 0.77
SIL1-212ENST00000509400 RAD54L2Q9Y4B4 1467 aa19.85■□□□□ 0.77
SIL1-212ENST00000509400 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
SIL1-212ENST00000509400 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
SIL1-212ENST00000509400 SOGA1O94964 1423 aa19.76■□□□□ 0.75
SIL1-212ENST00000509400 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
SIL1-212ENST00000509400 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
SIL1-212ENST00000509400 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
SIL1-212ENST00000509400 CUX1P39880 1505 aa19.68■□□□□ 0.74
SIL1-212ENST00000509400 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
SIL1-212ENST00000509400 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.73
SIL1-212ENST00000509400 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
SIL1-212ENST00000509400 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
SIL1-212ENST00000509400 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
SIL1-212ENST00000509400 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
SIL1-212ENST00000509400 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
SIL1-212ENST00000509400 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
SIL1-212ENST00000509400 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
SIL1-212ENST00000509400 ERCC6L2Q5T890 1561 aa19.46■□□□□ 0.71
SIL1-212ENST00000509400 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
SIL1-212ENST00000509400 WRNQ14191 1432 aaPredicted RBP eCLIP19.45■□□□□ 0.7
SIL1-212ENST00000509400 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
SIL1-212ENST00000509400 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
SIL1-212ENST00000509400 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
SIL1-212ENST00000509400 NUP160Q12769 1436 aa19.34■□□□□ 0.69
SIL1-212ENST00000509400 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
SIL1-212ENST00000509400 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
SIL1-212ENST00000509400 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
SIL1-212ENST00000509400 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
SIL1-212ENST00000509400 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
SIL1-212ENST00000509400 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
SIL1-212ENST00000509400 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
SIL1-212ENST00000509400 ERICH3Q5RHP9 1530 aa19.19■□□□□ 0.66
SIL1-212ENST00000509400 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms