RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
TUSC3-208ENST00000509177 ABCC9O60706 1549 aa24.5■■□□□ 1.51
TUSC3-208ENST00000509177 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
TUSC3-208ENST00000509177 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
TUSC3-208ENST00000509177 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
TUSC3-208ENST00000509177 NACADO15069 1562 aa22.95■■□□□ 1.26
TUSC3-208ENST00000509177 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
TUSC3-208ENST00000509177 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
TUSC3-208ENST00000509177 UNC13AQ9UPW8 1703 aa22.66■■□□□ 1.22
TUSC3-208ENST00000509177 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
TUSC3-208ENST00000509177 BICRAQ9NZM4 1560 aa22.55■■□□□ 1.2
TUSC3-208ENST00000509177 ZCCHC6Q5VYS8 1495 aaKnown RBP22.22■■□□□ 1.15
TUSC3-208ENST00000509177 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
TUSC3-208ENST00000509177 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
TUSC3-208ENST00000509177 CC2D2AQ9P2K1 1620 aa22.1■■□□□ 1.13
TUSC3-208ENST00000509177 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
TUSC3-208ENST00000509177 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
TUSC3-208ENST00000509177 EIF4G1Q04637 1599 aaKnown RBP21.99■■□□□ 1.11
TUSC3-208ENST00000509177 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
TUSC3-208ENST00000509177 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
TUSC3-208ENST00000509177 CUX2O14529 1486 aa21.2■□□□□ 0.98
TUSC3-208ENST00000509177 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
TUSC3-208ENST00000509177 ATAD2BQ9ULI0 1458 aa21.12■□□□□ 0.97
TUSC3-208ENST00000509177 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
TUSC3-208ENST00000509177 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
TUSC3-208ENST00000509177 HMGXB3Q12766 1538 aa21.01■□□□□ 0.95
TUSC3-208ENST00000509177 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
TUSC3-208ENST00000509177 NESP48681 1621 aa20.98■□□□□ 0.95
TUSC3-208ENST00000509177 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
TUSC3-208ENST00000509177 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
TUSC3-208ENST00000509177 PEG3Q9GZU2 1588 aa20.82■□□□□ 0.92
TUSC3-208ENST00000509177 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
TUSC3-208ENST00000509177 LAMC3Q9Y6N6 1575 aa20.75■□□□□ 0.91
TUSC3-208ENST00000509177 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
TUSC3-208ENST00000509177 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
TUSC3-208ENST00000509177 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
TUSC3-208ENST00000509177 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
TUSC3-208ENST00000509177 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
TUSC3-208ENST00000509177 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
TUSC3-208ENST00000509177 WDR62O43379 1518 aa20.46■□□□□ 0.87
TUSC3-208ENST00000509177 TRIM41Q8WV44 630 aa20.45■□□□□ 0.86
TUSC3-208ENST00000509177 WIZO95785 1651 aa20.45■□□□□ 0.86
TUSC3-208ENST00000509177 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
TUSC3-208ENST00000509177 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
TUSC3-208ENST00000509177 CFTRP13569 1480 aa20.27■□□□□ 0.84
TUSC3-208ENST00000509177 OSCARQ8IYS5 282 aa20.2■□□□□ 0.82
TUSC3-208ENST00000509177 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
TUSC3-208ENST00000509177 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
TUSC3-208ENST00000509177 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
TUSC3-208ENST00000509177 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
TUSC3-208ENST00000509177 ZNF608Q9ULD9 1512 aaPredicted RBP19.99■□□□□ 0.79
TUSC3-208ENST00000509177 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
TUSC3-208ENST00000509177 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
TUSC3-208ENST00000509177 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
TUSC3-208ENST00000509177 CCDC88BA6NC98 1476 aa19.95■□□□□ 0.78
TUSC3-208ENST00000509177 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
TUSC3-208ENST00000509177 TOPBP1Q92547 1522 aa19.91■□□□□ 0.78
TUSC3-208ENST00000509177 ARHGEF11O15085 1522 aa19.88■□□□□ 0.77
TUSC3-208ENST00000509177 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.77
TUSC3-208ENST00000509177 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
TUSC3-208ENST00000509177 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
TUSC3-208ENST00000509177 AQRO60306 1485 aaKnown RBP eCLIP19.76■□□□□ 0.75
TUSC3-208ENST00000509177 TARBP1Q13395 1621 aaKnown RBP19.76■□□□□ 0.75
TUSC3-208ENST00000509177 CYB5RLQ6IPT4 315 aa19.75■□□□□ 0.75
TUSC3-208ENST00000509177 CHD1O14646 1710 aa19.73■□□□□ 0.75
TUSC3-208ENST00000509177 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
TUSC3-208ENST00000509177 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
TUSC3-208ENST00000509177 FBLN2P98095 1184 aa19.66■□□□□ 0.74
TUSC3-208ENST00000509177 RAD54L2Q9Y4B4 1467 aa19.63■□□□□ 0.73
TUSC3-208ENST00000509177 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
TUSC3-208ENST00000509177 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
TUSC3-208ENST00000509177 SOGA1O94964 1423 aa19.59■□□□□ 0.73
TUSC3-208ENST00000509177 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
TUSC3-208ENST00000509177 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
TUSC3-208ENST00000509177 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
TUSC3-208ENST00000509177 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
TUSC3-208ENST00000509177 WDR97A6NE52 1622 aa19.49■□□□□ 0.71
TUSC3-208ENST00000509177 CUX1P39880 1505 aa19.48■□□□□ 0.71
TUSC3-208ENST00000509177 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
TUSC3-208ENST00000509177 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
TUSC3-208ENST00000509177 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
TUSC3-208ENST00000509177 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
TUSC3-208ENST00000509177 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
TUSC3-208ENST00000509177 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
TUSC3-208ENST00000509177 PBRM1Q86U86 1689 aa19.33■□□□□ 0.69
TUSC3-208ENST00000509177 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
TUSC3-208ENST00000509177 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
TUSC3-208ENST00000509177 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
TUSC3-208ENST00000509177 GRIN2AQ12879 1464 aa19.2■□□□□ 0.66
TUSC3-208ENST00000509177 NUP160Q12769 1436 aa19.16■□□□□ 0.66
TUSC3-208ENST00000509177 WRNQ14191 1432 aaPredicted RBP eCLIP19.15■□□□□ 0.66
TUSC3-208ENST00000509177 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
TUSC3-208ENST00000509177 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
TUSC3-208ENST00000509177 SHROOM2Q13796 1616 aa19.09■□□□□ 0.65
TUSC3-208ENST00000509177 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
TUSC3-208ENST00000509177 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
TUSC3-208ENST00000509177 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
TUSC3-208ENST00000509177 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
TUSC3-208ENST00000509177 PRG4Q92954 1404 aaPredicted RBP18.99■□□□□ 0.63
TUSC3-208ENST00000509177 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms