RNA–Protein interactions for RNA: ENST00000509078.1

SMUG1-216, Transcript of single-strand-selective monofunctional uracil-DNA glycosylase 1, humanhuman

TSL 4

Gene SMUG1, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMUG1-216ENST00000509078 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
SMUG1-216ENST00000509078 ABCC9O60706 1549 aa23.43■■□□□ 1.34
SMUG1-216ENST00000509078 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
SMUG1-216ENST00000509078 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
SMUG1-216ENST00000509078 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
SMUG1-216ENST00000509078 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
SMUG1-216ENST00000509078 NACADO15069 1562 aa21.95■■□□□ 1.1
SMUG1-216ENST00000509078 UNC13AQ9UPW8 1703 aa21.88■■□□□ 1.09
SMUG1-216ENST00000509078 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMUG1-216ENST00000509078 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
SMUG1-216ENST00000509078 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
SMUG1-216ENST00000509078 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
SMUG1-216ENST00000509078 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
SMUG1-216ENST00000509078 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
SMUG1-216ENST00000509078 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
SMUG1-216ENST00000509078 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
SMUG1-216ENST00000509078 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SMUG1-216ENST00000509078 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
SMUG1-216ENST00000509078 SMARCA4P51532 1647 aa20.27■□□□□ 0.83
SMUG1-216ENST00000509078 NCAPD3P42695 1498 aa20.25■□□□□ 0.83
SMUG1-216ENST00000509078 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
SMUG1-216ENST00000509078 ERCC6Q03468 1493 aa20.16■□□□□ 0.82
SMUG1-216ENST00000509078 NESP48681 1621 aa20.16■□□□□ 0.82
SMUG1-216ENST00000509078 DNAJC5Q9H3Z4 198 aa20.15■□□□□ 0.82
SMUG1-216ENST00000509078 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
SMUG1-216ENST00000509078 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
SMUG1-216ENST00000509078 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
SMUG1-216ENST00000509078 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
SMUG1-216ENST00000509078 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
SMUG1-216ENST00000509078 CUX2O14529 1486 aa20.04■□□□□ 0.8
SMUG1-216ENST00000509078 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
SMUG1-216ENST00000509078 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
SMUG1-216ENST00000509078 THOC2Q8NI27 1593 aaKnown RBP19.9■□□□□ 0.78
SMUG1-216ENST00000509078 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
SMUG1-216ENST00000509078 WIZO95785 1651 aa19.87■□□□□ 0.77
SMUG1-216ENST00000509078 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
SMUG1-216ENST00000509078 SUPT5HO00267 1087 aaKnown RBP19.81■□□□□ 0.76
SMUG1-216ENST00000509078 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
SMUG1-216ENST00000509078 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
SMUG1-216ENST00000509078 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
SMUG1-216ENST00000509078 TOP2AP11388 1531 aaKnown RBP19.55■□□□□ 0.72
SMUG1-216ENST00000509078 WDR62O43379 1518 aa19.54■□□□□ 0.72
SMUG1-216ENST00000509078 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
SMUG1-216ENST00000509078 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
SMUG1-216ENST00000509078 CFTRP13569 1480 aa19.42■□□□□ 0.7
SMUG1-216ENST00000509078 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
SMUG1-216ENST00000509078 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
SMUG1-216ENST00000509078 PRDM2Q13029 1718 aa19.35■□□□□ 0.69
SMUG1-216ENST00000509078 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
SMUG1-216ENST00000509078 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
SMUG1-216ENST00000509078 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
SMUG1-216ENST00000509078 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
SMUG1-216ENST00000509078 IFT140Q96RY7 1462 aa19.06■□□□□ 0.64
SMUG1-216ENST00000509078 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SMUG1-216ENST00000509078 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
SMUG1-216ENST00000509078 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
SMUG1-216ENST00000509078 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
SMUG1-216ENST00000509078 DNMBPQ6XZF7 1577 aa19.03■□□□□ 0.64
SMUG1-216ENST00000509078 CHD1O14646 1710 aa19.01■□□□□ 0.63
SMUG1-216ENST00000509078 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
SMUG1-216ENST00000509078 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.632e-7■■■■■ 35
SMUG1-216ENST00000509078 RAD54L2Q9Y4B4 1467 aa18.94■□□□□ 0.62
SMUG1-216ENST00000509078 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
SMUG1-216ENST00000509078 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
SMUG1-216ENST00000509078 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
SMUG1-216ENST00000509078 FBLN2P98095 1184 aa18.88■□□□□ 0.61
SMUG1-216ENST00000509078 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
SMUG1-216ENST00000509078 CUX1P39880 1505 aa18.83■□□□□ 0.6
SMUG1-216ENST00000509078 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.6
SMUG1-216ENST00000509078 SOGA1O94964 1423 aa18.82■□□□□ 0.6
SMUG1-216ENST00000509078 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
SMUG1-216ENST00000509078 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.59
SMUG1-216ENST00000509078 ARAP1Q96P48 1450 aa18.75■□□□□ 0.59
SMUG1-216ENST00000509078 CHIC1Q5VXU3 224 aa18.74■□□□□ 0.59
SMUG1-216ENST00000509078 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
SMUG1-216ENST00000509078 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
SMUG1-216ENST00000509078 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
SMUG1-216ENST00000509078 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
SMUG1-216ENST00000509078 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
SMUG1-216ENST00000509078 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
SMUG1-216ENST00000509078 CHMP7Q8WUX9 453 aaPredicted RBP18.63■□□□□ 0.57
SMUG1-216ENST00000509078 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
SMUG1-216ENST00000509078 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
SMUG1-216ENST00000509078 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
SMUG1-216ENST00000509078 MAGI1Q96QZ7 1491 aaPredicted RBP18.61■□□□□ 0.57
SMUG1-216ENST00000509078 GAPVD1Q14C86 1478 aa18.59■□□□□ 0.57
SMUG1-216ENST00000509078 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.56
SMUG1-216ENST00000509078 SYNJ2O15056 1496 aa18.57■□□□□ 0.56
SMUG1-216ENST00000509078 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
SMUG1-216ENST00000509078 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
SMUG1-216ENST00000509078 ADAMTS12P58397 1594 aa18.45■□□□□ 0.54
SMUG1-216ENST00000509078 CEP170Q5SW79 1584 aa18.44■□□□□ 0.54
SMUG1-216ENST00000509078 GRIN2AQ12879 1464 aa18.43■□□□□ 0.54
SMUG1-216ENST00000509078 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
SMUG1-216ENST00000509078 NUP160Q12769 1436 aa18.33■□□□□ 0.53
SMUG1-216ENST00000509078 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
SMUG1-216ENST00000509078 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
SMUG1-216ENST00000509078 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
SMUG1-216ENST00000509078 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
SMUG1-216ENST00000509078 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms