RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 NISCHQ9Y2I1 1504 aa25.5■■□□□ 1.67
POLR2J3-214ENST00000508910 CCDC180Q9P1Z9 1646 aa22.49■■□□□ 1.19
POLR2J3-214ENST00000508910 ABCC9O60706 1549 aa21.42■■□□□ 1.02
POLR2J3-214ENST00000508910 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
POLR2J3-214ENST00000508910 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
POLR2J3-214ENST00000508910 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
POLR2J3-214ENST00000508910 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
POLR2J3-214ENST00000508910 NACADO15069 1562 aa20.98■□□□□ 0.95
POLR2J3-214ENST00000508910 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
POLR2J3-214ENST00000508910 SCRIBQ14160 1630 aa20.53■□□□□ 0.88
POLR2J3-214ENST00000508910 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
POLR2J3-214ENST00000508910 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
POLR2J3-214ENST00000508910 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
POLR2J3-214ENST00000508910 PABPN1Q86U42 306 aaKnown RBP eCLIP20.06■□□□□ 0.8
POLR2J3-214ENST00000508910 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.76
POLR2J3-214ENST00000508910 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
POLR2J3-214ENST00000508910 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
POLR2J3-214ENST00000508910 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
POLR2J3-214ENST00000508910 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
POLR2J3-214ENST00000508910 RSF1Q96T23 1441 aaPredicted RBP19.61■□□□□ 0.73
POLR2J3-214ENST00000508910 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
POLR2J3-214ENST00000508910 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
POLR2J3-214ENST00000508910 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
POLR2J3-214ENST00000508910 WIZO95785 1651 aa19.47■□□□□ 0.71
POLR2J3-214ENST00000508910 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
POLR2J3-214ENST00000508910 ATAD2BQ9ULI0 1458 aa19.42■□□□□ 0.7
POLR2J3-214ENST00000508910 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
POLR2J3-214ENST00000508910 TOP2AP11388 1531 aaKnown RBP19.33■□□□□ 0.68
POLR2J3-214ENST00000508910 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
POLR2J3-214ENST00000508910 NCAPD3P42695 1498 aa19.33■□□□□ 0.68
POLR2J3-214ENST00000508910 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
POLR2J3-214ENST00000508910 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
POLR2J3-214ENST00000508910 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
POLR2J3-214ENST00000508910 CFTRP13569 1480 aa18.8■□□□□ 0.6
POLR2J3-214ENST00000508910 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
POLR2J3-214ENST00000508910 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
POLR2J3-214ENST00000508910 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
POLR2J3-214ENST00000508910 NESP48681 1621 aa18.69■□□□□ 0.58
POLR2J3-214ENST00000508910 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
POLR2J3-214ENST00000508910 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
POLR2J3-214ENST00000508910 ABCC8Q09428 1581 aa18.54■□□□□ 0.56
POLR2J3-214ENST00000508910 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
POLR2J3-214ENST00000508910 KIF21AQ7Z4S6 1674 aa18.53■□□□□ 0.56
POLR2J3-214ENST00000508910 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
POLR2J3-214ENST00000508910 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.551e-6■■■■■ 58.5
POLR2J3-214ENST00000508910 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
POLR2J3-214ENST00000508910 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
POLR2J3-214ENST00000508910 CUX1P39880 1505 aa18.43■□□□□ 0.54
POLR2J3-214ENST00000508910 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
POLR2J3-214ENST00000508910 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
POLR2J3-214ENST00000508910 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
POLR2J3-214ENST00000508910 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.54
POLR2J3-214ENST00000508910 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
POLR2J3-214ENST00000508910 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
POLR2J3-214ENST00000508910 TOPBP1Q92547 1522 aa18.36■□□□□ 0.53
POLR2J3-214ENST00000508910 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
POLR2J3-214ENST00000508910 WDR62O43379 1518 aa18.32■□□□□ 0.52
POLR2J3-214ENST00000508910 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
POLR2J3-214ENST00000508910 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
POLR2J3-214ENST00000508910 SOGA1O94964 1423 aa18.14■□□□□ 0.49
POLR2J3-214ENST00000508910 CUX2O14529 1486 aa18.14■□□□□ 0.49
POLR2J3-214ENST00000508910 WDR97A6NE52 1622 aa18.13■□□□□ 0.49
POLR2J3-214ENST00000508910 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
POLR2J3-214ENST00000508910 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
POLR2J3-214ENST00000508910 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
POLR2J3-214ENST00000508910 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
POLR2J3-214ENST00000508910 EEA1Q15075 1411 aa18.1■□□□□ 0.49
POLR2J3-214ENST00000508910 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
POLR2J3-214ENST00000508910 ABCA5Q8WWZ7 1642 aa18.03■□□□□ 0.48
POLR2J3-214ENST00000508910 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
POLR2J3-214ENST00000508910 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-214ENST00000508910 TDRD9Q8NDG6 1382 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-214ENST00000508910 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-214ENST00000508910 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-214ENST00000508910 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
POLR2J3-214ENST00000508910 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
POLR2J3-214ENST00000508910 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
POLR2J3-214ENST00000508910 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
POLR2J3-214ENST00000508910 AQRO60306 1485 aaKnown RBP eCLIP17.92■□□□□ 0.464e-8■■■■□ 22.5
POLR2J3-214ENST00000508910 CUL7Q14999 1698 aa17.9■□□□□ 0.46
POLR2J3-214ENST00000508910 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
POLR2J3-214ENST00000508910 KIF21BO75037 1637 aa17.89■□□□□ 0.45
POLR2J3-214ENST00000508910 IGF1RP08069 1367 aa17.89■□□□□ 0.45
POLR2J3-214ENST00000508910 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
POLR2J3-214ENST00000508910 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
POLR2J3-214ENST00000508910 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
POLR2J3-214ENST00000508910 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
POLR2J3-214ENST00000508910 MAGI1Q96QZ7 1491 aaPredicted RBP17.81■□□□□ 0.44
POLR2J3-214ENST00000508910 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
POLR2J3-214ENST00000508910 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
POLR2J3-214ENST00000508910 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
POLR2J3-214ENST00000508910 SYNJ2O15056 1496 aa17.72■□□□□ 0.43
POLR2J3-214ENST00000508910 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
POLR2J3-214ENST00000508910 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
POLR2J3-214ENST00000508910 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
POLR2J3-214ENST00000508910 TNIKQ9UKE5 1360 aa17.66■□□□□ 0.42
POLR2J3-214ENST00000508910 UBTFP17480 764 aaKnown RBP17.65■□□□□ 0.42
POLR2J3-214ENST00000508910 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.41
POLR2J3-214ENST00000508910 CHD1O14646 1710 aa17.63■□□□□ 0.41
POLR2J3-214ENST00000508910 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms