RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
SH3D21-206ENST00000508854 ABCC9O60706 1549 aa22.77■■□□□ 1.24
SH3D21-206ENST00000508854 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
SH3D21-206ENST00000508854 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
SH3D21-206ENST00000508854 NACADO15069 1562 aa21.5■■□□□ 1.03
SH3D21-206ENST00000508854 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
SH3D21-206ENST00000508854 DCAF8L2P0C7V8 631 aa21.35■■□□□ 1.01
SH3D21-206ENST00000508854 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
SH3D21-206ENST00000508854 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
SH3D21-206ENST00000508854 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
SH3D21-206ENST00000508854 BICRAQ9NZM4 1560 aa20.96■□□□□ 0.95
SH3D21-206ENST00000508854 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.92
SH3D21-206ENST00000508854 ZCCHC6Q5VYS8 1495 aaKnown RBP20.8■□□□□ 0.92
SH3D21-206ENST00000508854 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
SH3D21-206ENST00000508854 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
SH3D21-206ENST00000508854 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
SH3D21-206ENST00000508854 CC2D2AQ9P2K1 1620 aa20.57■□□□□ 0.88
SH3D21-206ENST00000508854 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
SH3D21-206ENST00000508854 DNAJC5Q9H3Z4 198 aa19.94■□□□□ 0.78
SH3D21-206ENST00000508854 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
SH3D21-206ENST00000508854 CUX2O14529 1486 aa19.77■□□□□ 0.76
SH3D21-206ENST00000508854 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
SH3D21-206ENST00000508854 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
SH3D21-206ENST00000508854 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
SH3D21-206ENST00000508854 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
SH3D21-206ENST00000508854 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
SH3D21-206ENST00000508854 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
SH3D21-206ENST00000508854 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
SH3D21-206ENST00000508854 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
SH3D21-206ENST00000508854 NESP48681 1621 aa19.48■□□□□ 0.71
SH3D21-206ENST00000508854 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
SH3D21-206ENST00000508854 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
SH3D21-206ENST00000508854 MROH2BQ7Z745 1585 aa19.35■□□□□ 0.69
SH3D21-206ENST00000508854 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
SH3D21-206ENST00000508854 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
SH3D21-206ENST00000508854 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
SH3D21-206ENST00000508854 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
SH3D21-206ENST00000508854 WIZO95785 1651 aa19.1■□□□□ 0.65
SH3D21-206ENST00000508854 WDR62O43379 1518 aa19.08■□□□□ 0.64
SH3D21-206ENST00000508854 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
SH3D21-206ENST00000508854 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
SH3D21-206ENST00000508854 CFTRP13569 1480 aa18.97■□□□□ 0.63
SH3D21-206ENST00000508854 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
SH3D21-206ENST00000508854 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
SH3D21-206ENST00000508854 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
SH3D21-206ENST00000508854 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
SH3D21-206ENST00000508854 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
SH3D21-206ENST00000508854 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
SH3D21-206ENST00000508854 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
SH3D21-206ENST00000508854 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
SH3D21-206ENST00000508854 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
SH3D21-206ENST00000508854 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
SH3D21-206ENST00000508854 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
SH3D21-206ENST00000508854 RIMBP3CA6NJZ7 1639 aa18.55■□□□□ 0.56
SH3D21-206ENST00000508854 RIMBP3BA6NNM3 1639 aa18.55■□□□□ 0.56
SH3D21-206ENST00000508854 RIMBP3Q9UFD9 1639 aa18.55■□□□□ 0.56
SH3D21-206ENST00000508854 DNMBPQ6XZF7 1577 aa18.53■□□□□ 0.56
SH3D21-206ENST00000508854 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
SH3D21-206ENST00000508854 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
SH3D21-206ENST00000508854 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.544e-11■■■■■ 34.5
SH3D21-206ENST00000508854 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
SH3D21-206ENST00000508854 FBLN2P98095 1184 aa18.4■□□□□ 0.54
SH3D21-206ENST00000508854 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
SH3D21-206ENST00000508854 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
SH3D21-206ENST00000508854 CHD1O14646 1710 aa18.37■□□□□ 0.53
SH3D21-206ENST00000508854 SOGA1O94964 1423 aa18.35■□□□□ 0.53
SH3D21-206ENST00000508854 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
SH3D21-206ENST00000508854 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
SH3D21-206ENST00000508854 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
SH3D21-206ENST00000508854 TRHP20396 242 aaPredicted RBP18.28■□□□□ 0.52
SH3D21-206ENST00000508854 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
SH3D21-206ENST00000508854 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
SH3D21-206ENST00000508854 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
SH3D21-206ENST00000508854 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
SH3D21-206ENST00000508854 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
SH3D21-206ENST00000508854 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
SH3D21-206ENST00000508854 GRIN2BQ13224 1484 aa18.21■□□□□ 0.51
SH3D21-206ENST00000508854 CUX1P39880 1505 aa18.18■□□□□ 0.5
SH3D21-206ENST00000508854 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
SH3D21-206ENST00000508854 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
SH3D21-206ENST00000508854 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
SH3D21-206ENST00000508854 PBRM1Q86U86 1689 aa18.07■□□□□ 0.48
SH3D21-206ENST00000508854 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
SH3D21-206ENST00000508854 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
SH3D21-206ENST00000508854 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
SH3D21-206ENST00000508854 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
SH3D21-206ENST00000508854 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
SH3D21-206ENST00000508854 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
SH3D21-206ENST00000508854 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
SH3D21-206ENST00000508854 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
SH3D21-206ENST00000508854 NUP160Q12769 1436 aa17.89■□□□□ 0.46
SH3D21-206ENST00000508854 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
SH3D21-206ENST00000508854 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
SH3D21-206ENST00000508854 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
SH3D21-206ENST00000508854 CEP170Q5SW79 1584 aa17.85■□□□□ 0.45
SH3D21-206ENST00000508854 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
SH3D21-206ENST00000508854 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
SH3D21-206ENST00000508854 JPH4Q96JJ6 628 aa17.77■□□□□ 0.44
SH3D21-206ENST00000508854 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
SH3D21-206ENST00000508854 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms