RNA–Protein interactions for RNA: ENST00000508670.1

FBXO38-213, Transcript of F-box protein 38, humanhuman

TSL 4

Gene FBXO38, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-213ENST00000508670 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
FBXO38-213ENST00000508670 ABCC9O60706 1549 aa15.07■□□□□ 0
FBXO38-213ENST00000508670 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
FBXO38-213ENST00000508670 DCAF8L2P0C7V8 631 aa14.32□□□□□ -0.12
FBXO38-213ENST00000508670 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
FBXO38-213ENST00000508670 NACADO15069 1562 aa14.2□□□□□ -0.14
FBXO38-213ENST00000508670 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
FBXO38-213ENST00000508670 PABPN1Q86U42 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
FBXO38-213ENST00000508670 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
FBXO38-213ENST00000508670 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
FBXO38-213ENST00000508670 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
FBXO38-213ENST00000508670 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
FBXO38-213ENST00000508670 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
FBXO38-213ENST00000508670 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
FBXO38-213ENST00000508670 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
FBXO38-213ENST00000508670 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
FBXO38-213ENST00000508670 EIF4G1Q04637 1599 aaKnown RBP13.55□□□□□ -0.24
FBXO38-213ENST00000508670 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
FBXO38-213ENST00000508670 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
FBXO38-213ENST00000508670 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
FBXO38-213ENST00000508670 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
FBXO38-213ENST00000508670 SMARCA2P51531 1590 aa13.05□□□□□ -0.32
FBXO38-213ENST00000508670 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
FBXO38-213ENST00000508670 MROH2BQ7Z745 1585 aa13.04□□□□□ -0.32
FBXO38-213ENST00000508670 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
FBXO38-213ENST00000508670 NESP48681 1621 aa12.99□□□□□ -0.33
FBXO38-213ENST00000508670 BAZ1BQ9UIG0 1483 aaKnown RBP12.99□□□□□ -0.33
FBXO38-213ENST00000508670 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
FBXO38-213ENST00000508670 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
FBXO38-213ENST00000508670 WIZO95785 1651 aa12.89□□□□□ -0.35
FBXO38-213ENST00000508670 CUX2O14529 1486 aa12.85□□□□□ -0.35
FBXO38-213ENST00000508670 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
FBXO38-213ENST00000508670 LAMC3Q9Y6N6 1575 aa12.8□□□□□ -0.36
FBXO38-213ENST00000508670 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
FBXO38-213ENST00000508670 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
FBXO38-213ENST00000508670 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
FBXO38-213ENST00000508670 THOC2Q8NI27 1593 aaKnown RBP12.76□□□□□ -0.37
FBXO38-213ENST00000508670 PDS5BQ9NTI5 1447 aa12.74□□□□□ -0.37
FBXO38-213ENST00000508670 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
FBXO38-213ENST00000508670 MRC2Q9UBG0 1479 aa12.64□□□□□ -0.39
FBXO38-213ENST00000508670 CFTRP13569 1480 aa12.63□□□□□ -0.39
FBXO38-213ENST00000508670 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
FBXO38-213ENST00000508670 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
FBXO38-213ENST00000508670 WDR62O43379 1518 aa12.59□□□□□ -0.39
FBXO38-213ENST00000508670 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
FBXO38-213ENST00000508670 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
FBXO38-213ENST00000508670 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
FBXO38-213ENST00000508670 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
FBXO38-213ENST00000508670 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
FBXO38-213ENST00000508670 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
FBXO38-213ENST00000508670 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
FBXO38-213ENST00000508670 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
FBXO38-213ENST00000508670 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
FBXO38-213ENST00000508670 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
FBXO38-213ENST00000508670 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
FBXO38-213ENST00000508670 AQRO60306 1485 aaKnown RBP eCLIP12.29□□□□□ -0.44
FBXO38-213ENST00000508670 RAD54L2Q9Y4B4 1467 aa12.28□□□□□ -0.44
FBXO38-213ENST00000508670 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.44
FBXO38-213ENST00000508670 TARBP1Q13395 1621 aaKnown RBP12.27□□□□□ -0.44
FBXO38-213ENST00000508670 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
FBXO38-213ENST00000508670 AEBP2Q6ZN18 517 aaPredicted RBP12.26□□□□□ -0.45
FBXO38-213ENST00000508670 SOGA1O94964 1423 aa12.24□□□□□ -0.45
FBXO38-213ENST00000508670 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
FBXO38-213ENST00000508670 CUX1P39880 1505 aa12.23□□□□□ -0.45
FBXO38-213ENST00000508670 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.45
FBXO38-213ENST00000508670 FBLN2P98095 1184 aa12.21□□□□□ -0.45
FBXO38-213ENST00000508670 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
FBXO38-213ENST00000508670 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
FBXO38-213ENST00000508670 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
FBXO38-213ENST00000508670 CHD1O14646 1710 aa12.17□□□□□ -0.46
FBXO38-213ENST00000508670 ARHGEF11O15085 1522 aa12.13□□□□□ -0.47
FBXO38-213ENST00000508670 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
FBXO38-213ENST00000508670 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
FBXO38-213ENST00000508670 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
FBXO38-213ENST00000508670 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
FBXO38-213ENST00000508670 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
FBXO38-213ENST00000508670 GAPVD1Q14C86 1478 aa12.07□□□□□ -0.48
FBXO38-213ENST00000508670 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
FBXO38-213ENST00000508670 SYNJ1O43426 1573 aa12.05□□□□□ -0.48
FBXO38-213ENST00000508670 WRNQ14191 1432 aaPredicted RBP eCLIP12.04□□□□□ -0.48
FBXO38-213ENST00000508670 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
FBXO38-213ENST00000508670 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
FBXO38-213ENST00000508670 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
FBXO38-213ENST00000508670 ARAP1Q96P48 1450 aa12.03□□□□□ -0.48
FBXO38-213ENST00000508670 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
FBXO38-213ENST00000508670 TOP2BQ02880 1626 aa12.02□□□□□ -0.49
FBXO38-213ENST00000508670 ABCA5Q8WWZ7 1642 aa12.02□□□□□ -0.49
FBXO38-213ENST00000508670 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
FBXO38-213ENST00000508670 TRHP20396 242 aaPredicted RBP11.93□□□□□ -0.5
FBXO38-213ENST00000508670 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
FBXO38-213ENST00000508670 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
FBXO38-213ENST00000508670 CEP170Q5SW79 1584 aa11.92□□□□□ -0.5
FBXO38-213ENST00000508670 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
FBXO38-213ENST00000508670 FHAD1B1AJZ9 1412 aa11.9□□□□□ -0.5
FBXO38-213ENST00000508670 NUP160Q12769 1436 aa11.88□□□□□ -0.51
FBXO38-213ENST00000508670 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
FBXO38-213ENST00000508670 CHIC1Q5VXU3 224 aa11.87□□□□□ -0.51
FBXO38-213ENST00000508670 IGF1RP08069 1367 aa11.83□□□□□ -0.52
FBXO38-213ENST00000508670 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
FBXO38-213ENST00000508670 SHROOM2Q13796 1616 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms