RNA–Protein interactions for RNA: ENST00000508183.5

SH3TC1-214, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 1,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-214ENST00000508183 NISCHQ9Y2I1 1504 aa44.89■■■■■ 4.78
SH3TC1-214ENST00000508183 CCDC180Q9P1Z9 1646 aa40.11■■■■■ 4.01
SH3TC1-214ENST00000508183 ABCC9O60706 1549 aa39.73■■■■□ 3.95
SH3TC1-214ENST00000508183 RB1CC1Q8TDY2 1594 aa38.01■■■■□ 3.68
SH3TC1-214ENST00000508183 NACADO15069 1562 aa37.85■■■■□ 3.65
SH3TC1-214ENST00000508183 DCAF8L2P0C7V8 631 aa37.8■■■■□ 3.64
SH3TC1-214ENST00000508183 ZCCHC6Q5VYS8 1495 aaKnown RBP37.47■■■■□ 3.59
SH3TC1-214ENST00000508183 MYO15BQ96JP2 1530 aa37.45■■■■□ 3.59
SH3TC1-214ENST00000508183 DCAF1Q9Y4B6 1507 aa37.12■■■■□ 3.53
SH3TC1-214ENST00000508183 PABPN1Q86U42 306 aaKnown RBP eCLIP37.05■■■■□ 3.52
SH3TC1-214ENST00000508183 UNC13AQ9UPW8 1703 aa37.03■■■■□ 3.52
SH3TC1-214ENST00000508183 DNAJC5BQ9UF47 199 aa36.81■■■■□ 3.48
SH3TC1-214ENST00000508183 BICRAQ9NZM4 1560 aa36.8■■■■□ 3.48
SH3TC1-214ENST00000508183 SCRIBQ14160 1630 aa36.59■■■■□ 3.45
SH3TC1-214ENST00000508183 SHROOM4Q9ULL8 1493 aa36.46■■■■□ 3.43
SH3TC1-214ENST00000508183 EIF4G1Q04637 1599 aaKnown RBP35.93■■■■□ 3.34
SH3TC1-214ENST00000508183 CC2D2AQ9P2K1 1620 aa35.89■■■■□ 3.34
SH3TC1-214ENST00000508183 CECR2Q9BXF3 1484 aa35.76■■■■□ 3.32
SH3TC1-214ENST00000508183 SMARCA4P51532 1647 aa34.93■■■■□ 3.18
SH3TC1-214ENST00000508183 NCAPD3P42695 1498 aa34.91■■■■□ 3.18
SH3TC1-214ENST00000508183 ATAD2BQ9ULI0 1458 aa34.87■■■■□ 3.17
SH3TC1-214ENST00000508183 BAZ1AQ9NRL2 1556 aaPredicted RBP34.86■■■■□ 3.17
SH3TC1-214ENST00000508183 SMARCA2P51531 1590 aa34.84■■■■□ 3.17
SH3TC1-214ENST00000508183 HMGXB3Q12766 1538 aa34.71■■■■□ 3.15
SH3TC1-214ENST00000508183 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
SH3TC1-214ENST00000508183 MROH2BQ7Z745 1585 aa34.6■■■■□ 3.13
SH3TC1-214ENST00000508183 PEG3Q9GZU2 1588 aa34.58■■■■□ 3.13
SH3TC1-214ENST00000508183 ERCC6Q03468 1493 aa34.34■■■■□ 3.09
SH3TC1-214ENST00000508183 RSF1Q96T23 1441 aaPredicted RBP34.34■■■■□ 3.09
SH3TC1-214ENST00000508183 WIZO95785 1651 aa34.24■■■■□ 3.07
SH3TC1-214ENST00000508183 NESP48681 1621 aa34.21■■■■□ 3.07
SH3TC1-214ENST00000508183 CUX2O14529 1486 aa34.09■■■■□ 3.05
SH3TC1-214ENST00000508183 LAMC3Q9Y6N6 1575 aa34.08■■■■□ 3.05
SH3TC1-214ENST00000508183 PDS5BQ9NTI5 1447 aa33.91■■■■□ 3.02
SH3TC1-214ENST00000508183 CADPSQ9ULU8 1353 aa33.89■■■■□ 3.02
SH3TC1-214ENST00000508183 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
SH3TC1-214ENST00000508183 THOC2Q8NI27 1593 aaKnown RBP33.78■■■■□ 3
SH3TC1-214ENST00000508183 KIF21AQ7Z4S6 1674 aa33.77■■■■□ 3
SH3TC1-214ENST00000508183 SUPT5HO00267 1087 aaKnown RBP33.7■■■□□ 2.99
SH3TC1-214ENST00000508183 CFTRP13569 1480 aa33.58■■■□□ 2.97
SH3TC1-214ENST00000508183 DNAJC5Q9H3Z4 198 aa33.57■■■□□ 2.96
SH3TC1-214ENST00000508183 MRC2Q9UBG0 1479 aa33.57■■■□□ 2.96
SH3TC1-214ENST00000508183 CEP164Q9UPV0 1460 aa33.54■■■□□ 2.96
SH3TC1-214ENST00000508183 FANCD2Q9BXW9 1451 aa33.52■■■□□ 2.96
SH3TC1-214ENST00000508183 CCDC88BA6NC98 1476 aa33.49■■■□□ 2.95
SH3TC1-214ENST00000508183 WDR62O43379 1518 aa33.45■■■□□ 2.94
SH3TC1-214ENST00000508183 PRDM2Q13029 1718 aa33.24■■■□□ 2.91
SH3TC1-214ENST00000508183 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
SH3TC1-214ENST00000508183 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
SH3TC1-214ENST00000508183 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
SH3TC1-214ENST00000508183 IFT140Q96RY7 1462 aa32.84■■■□□ 2.85
SH3TC1-214ENST00000508183 DNMBPQ6XZF7 1577 aa32.83■■■□□ 2.85
SH3TC1-214ENST00000508183 ZNF608Q9ULD9 1512 aaPredicted RBP32.7■■■□□ 2.82
SH3TC1-214ENST00000508183 OSCARQ8IYS5 282 aa32.62■■■□□ 2.81
SH3TC1-214ENST00000508183 POLA1P09884 1462 aaPredicted RBP32.6■■■□□ 2.81
SH3TC1-214ENST00000508183 EIF4G3O43432 1585 aaKnown RBP32.56■■■□□ 2.8
SH3TC1-214ENST00000508183 TARBP1Q13395 1621 aaKnown RBP32.55■■■□□ 2.8
SH3TC1-214ENST00000508183 SOGA1O94964 1423 aa32.48■■■□□ 2.79
SH3TC1-214ENST00000508183 CUX1P39880 1505 aa32.47■■■□□ 2.79
SH3TC1-214ENST00000508183 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.791e-7■■■■■ 34.8
SH3TC1-214ENST00000508183 FGD5Q6ZNL6 1462 aa32.47■■■□□ 2.79
SH3TC1-214ENST00000508183 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
SH3TC1-214ENST00000508183 TDRD9Q8NDG6 1382 aaKnown RBP32.36■■■□□ 2.77
SH3TC1-214ENST00000508183 TRIM41Q8WV44 630 aa32.34■■■□□ 2.77
SH3TC1-214ENST00000508183 WRNQ14191 1432 aaPredicted RBP eCLIP32.33■■■□□ 2.77
SH3TC1-214ENST00000508183 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
SH3TC1-214ENST00000508183 SYNJ1O43426 1573 aa32.29■■■□□ 2.76
SH3TC1-214ENST00000508183 FBLN2P98095 1184 aa32.26■■■□□ 2.75
SH3TC1-214ENST00000508183 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
SH3TC1-214ENST00000508183 BIVM-ERCC5R4GMW8 1640 aa32.24■■■□□ 2.75
SH3TC1-214ENST00000508183 CHD1O14646 1710 aa32.21■■■□□ 2.75
SH3TC1-214ENST00000508183 SNAPC4Q5SXM2 1469 aa32.17■■■□□ 2.74
SH3TC1-214ENST00000508183 GRIN2BQ13224 1484 aa32.17■■■□□ 2.74
SH3TC1-214ENST00000508183 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
SH3TC1-214ENST00000508183 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
SH3TC1-214ENST00000508183 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
SH3TC1-214ENST00000508183 RIMBP3CA6NJZ7 1639 aa32.09■■■□□ 2.73
SH3TC1-214ENST00000508183 RIMBP3BA6NNM3 1639 aa32.09■■■□□ 2.73
SH3TC1-214ENST00000508183 RIMBP3Q9UFD9 1639 aa32.09■■■□□ 2.73
SH3TC1-214ENST00000508183 CHMP7Q8WUX9 453 aaPredicted RBP32.08■■■□□ 2.73
SH3TC1-214ENST00000508183 ARHGEF11O15085 1522 aa32.06■■■□□ 2.72
SH3TC1-214ENST00000508183 ABCA5Q8WWZ7 1642 aa32.01■■■□□ 2.72
SH3TC1-214ENST00000508183 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
SH3TC1-214ENST00000508183 SYNJ2O15056 1496 aa32■■■□□ 2.71
SH3TC1-214ENST00000508183 CLASP1Q7Z460 1538 aa31.86■■■□□ 2.69
SH3TC1-214ENST00000508183 CYB5RLQ6IPT4 315 aa31.83■■■□□ 2.69
SH3TC1-214ENST00000508183 ARAP1Q96P48 1450 aa31.76■■■□□ 2.67
SH3TC1-214ENST00000508183 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
SH3TC1-214ENST00000508183 GRIN2AQ12879 1464 aa31.74■■■□□ 2.67
SH3TC1-214ENST00000508183 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
SH3TC1-214ENST00000508183 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
SH3TC1-214ENST00000508183 FHAD1B1AJZ9 1412 aa31.72■■■□□ 2.67
SH3TC1-214ENST00000508183 NUP160Q12769 1436 aa31.6■■■□□ 2.65
SH3TC1-214ENST00000508183 KIF27Q86VH2 1401 aa31.59■■■□□ 2.65
SH3TC1-214ENST00000508183 CEP170Q5SW79 1584 aa31.57■■■□□ 2.64
SH3TC1-214ENST00000508183 RUSC2Q8N2Y8 1516 aa31.52■■■□□ 2.64
SH3TC1-214ENST00000508183 IGF1RP08069 1367 aa31.45■■■□□ 2.63
SH3TC1-214ENST00000508183 TRHP20396 242 aaPredicted RBP31.39■■■□□ 2.62
SH3TC1-214ENST00000508183 SHROOM2Q13796 1616 aa31.38■■■□□ 2.61
SH3TC1-214ENST00000508183 CUL7Q14999 1698 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms