RNA–Protein interactions for RNA: ENST00000508024.1

CWC27-204, Transcript of CWC27 spliceosome associated protein homolog, humanhuman

TSL 1 (best) BASIC

Gene CWC27, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC27-204ENST00000508024 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
CWC27-204ENST00000508024 ABCC9O60706 1549 aa19.57■□□□□ 0.72
CWC27-204ENST00000508024 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
CWC27-204ENST00000508024 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
CWC27-204ENST00000508024 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
CWC27-204ENST00000508024 NACADO15069 1562 aa18.37■□□□□ 0.53
CWC27-204ENST00000508024 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
CWC27-204ENST00000508024 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
CWC27-204ENST00000508024 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
CWC27-204ENST00000508024 BICRAQ9NZM4 1560 aa18.07■□□□□ 0.48
CWC27-204ENST00000508024 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
CWC27-204ENST00000508024 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
CWC27-204ENST00000508024 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
CWC27-204ENST00000508024 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
CWC27-204ENST00000508024 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
CWC27-204ENST00000508024 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
CWC27-204ENST00000508024 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
CWC27-204ENST00000508024 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
CWC27-204ENST00000508024 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
CWC27-204ENST00000508024 CUX2O14529 1486 aa17■□□□□ 0.31
CWC27-204ENST00000508024 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
CWC27-204ENST00000508024 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
CWC27-204ENST00000508024 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
CWC27-204ENST00000508024 HMGXB3Q12766 1538 aa16.82■□□□□ 0.28
CWC27-204ENST00000508024 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
CWC27-204ENST00000508024 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
CWC27-204ENST00000508024 NESP48681 1621 aa16.76■□□□□ 0.27
CWC27-204ENST00000508024 THOC2Q8NI27 1593 aaKnown RBP16.69■□□□□ 0.26
CWC27-204ENST00000508024 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
CWC27-204ENST00000508024 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
CWC27-204ENST00000508024 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
CWC27-204ENST00000508024 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
CWC27-204ENST00000508024 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
CWC27-204ENST00000508024 MROH2BQ7Z745 1585 aa16.53■□□□□ 0.24
CWC27-204ENST00000508024 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
CWC27-204ENST00000508024 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
CWC27-204ENST00000508024 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
CWC27-204ENST00000508024 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
CWC27-204ENST00000508024 WDR62O43379 1518 aa16.38■□□□□ 0.21
CWC27-204ENST00000508024 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
CWC27-204ENST00000508024 WIZO95785 1651 aa16.34■□□□□ 0.21
CWC27-204ENST00000508024 CEP164Q9UPV0 1460 aa16.26■□□□□ 0.19
CWC27-204ENST00000508024 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
CWC27-204ENST00000508024 CFTRP13569 1480 aa16.18■□□□□ 0.18
CWC27-204ENST00000508024 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
CWC27-204ENST00000508024 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
CWC27-204ENST00000508024 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
CWC27-204ENST00000508024 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
CWC27-204ENST00000508024 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
CWC27-204ENST00000508024 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
CWC27-204ENST00000508024 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
CWC27-204ENST00000508024 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
CWC27-204ENST00000508024 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
CWC27-204ENST00000508024 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
CWC27-204ENST00000508024 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
CWC27-204ENST00000508024 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
CWC27-204ENST00000508024 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
CWC27-204ENST00000508024 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
CWC27-204ENST00000508024 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
CWC27-204ENST00000508024 CHD1O14646 1710 aa15.85■□□□□ 0.13
CWC27-204ENST00000508024 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
CWC27-204ENST00000508024 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
CWC27-204ENST00000508024 TARBP1Q13395 1621 aaKnown RBP15.82■□□□□ 0.12
CWC27-204ENST00000508024 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.113e-6■■■■□ 20.1
CWC27-204ENST00000508024 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
CWC27-204ENST00000508024 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
CWC27-204ENST00000508024 POLA1P09884 1462 aaPredicted RBP15.72■□□□□ 0.11
CWC27-204ENST00000508024 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
CWC27-204ENST00000508024 FBLN2P98095 1184 aa15.64■□□□□ 0.09
CWC27-204ENST00000508024 WDR97A6NE52 1622 aa15.64■□□□□ 0.09
CWC27-204ENST00000508024 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.09
CWC27-204ENST00000508024 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
CWC27-204ENST00000508024 SOGA1O94964 1423 aa15.62■□□□□ 0.09
CWC27-204ENST00000508024 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
CWC27-204ENST00000508024 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
CWC27-204ENST00000508024 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
CWC27-204ENST00000508024 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
CWC27-204ENST00000508024 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
CWC27-204ENST00000508024 CUX1P39880 1505 aa15.55■□□□□ 0.08
CWC27-204ENST00000508024 GRIN2BQ13224 1484 aa15.52■□□□□ 0.08
CWC27-204ENST00000508024 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
CWC27-204ENST00000508024 SYNJ2O15056 1496 aa15.51■□□□□ 0.07
CWC27-204ENST00000508024 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
CWC27-204ENST00000508024 ABCA5Q8WWZ7 1642 aa15.44■□□□□ 0.06
CWC27-204ENST00000508024 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
CWC27-204ENST00000508024 ABCA10Q8WWZ4 1543 aa15.4■□□□□ 0.06
CWC27-204ENST00000508024 ERCC6L2Q5T890 1561 aa15.37■□□□□ 0.05
CWC27-204ENST00000508024 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
CWC27-204ENST00000508024 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
CWC27-204ENST00000508024 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
CWC27-204ENST00000508024 SHROOM2Q13796 1616 aa15.31■□□□□ 0.04
CWC27-204ENST00000508024 NUP160Q12769 1436 aa15.3■□□□□ 0.04
CWC27-204ENST00000508024 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
CWC27-204ENST00000508024 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
CWC27-204ENST00000508024 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
CWC27-204ENST00000508024 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
CWC27-204ENST00000508024 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
CWC27-204ENST00000508024 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
CWC27-204ENST00000508024 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
CWC27-204ENST00000508024 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms