RNA–Protein interactions for RNA: ENST00000507892.1

CCHCR1-225, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-225ENST00000507892 NISCHQ9Y2I1 1504 aa56.53■■■■■ 6.64
CCHCR1-225ENST00000507892 CCDC180Q9P1Z9 1646 aa50.18■■■■■ 5.62
CCHCR1-225ENST00000507892 ABCC9O60706 1549 aa49.05■■■■■ 5.44
CCHCR1-225ENST00000507892 DCAF8L2P0C7V8 631 aa47.22■■■■■ 5.15
CCHCR1-225ENST00000507892 RB1CC1Q8TDY2 1594 aa47.19■■■■■ 5.14
CCHCR1-225ENST00000507892 NACADO15069 1562 aa47.15■■■■■ 5.14
CCHCR1-225ENST00000507892 ZCCHC6Q5VYS8 1495 aaKnown RBP47.09■■■■■ 5.13
CCHCR1-225ENST00000507892 MYO15BQ96JP2 1530 aa46.87■■■■■ 5.09
CCHCR1-225ENST00000507892 DCAF1Q9Y4B6 1507 aa46.74■■■■■ 5.07
CCHCR1-225ENST00000507892 UNC13AQ9UPW8 1703 aa46.2■■■■■ 4.99
CCHCR1-225ENST00000507892 PABPN1Q86U42 306 aaKnown RBP eCLIP45.87■■■■■ 4.93
CCHCR1-225ENST00000507892 SCRIBQ14160 1630 aa45.85■■■■■ 4.93
CCHCR1-225ENST00000507892 BICRAQ9NZM4 1560 aa45.8■■■■■ 4.92
CCHCR1-225ENST00000507892 SHROOM4Q9ULL8 1493 aa45.22■■■■■ 4.83
CCHCR1-225ENST00000507892 DNAJC5BQ9UF47 199 aa44.96■■■■■ 4.79
CCHCR1-225ENST00000507892 EIF4G1Q04637 1599 aaKnown RBP44.56■■■■■ 4.72
CCHCR1-225ENST00000507892 CC2D2AQ9P2K1 1620 aa44.37■■■■■ 4.69
CCHCR1-225ENST00000507892 CECR2Q9BXF3 1484 aa44.06■■■■■ 4.64
CCHCR1-225ENST00000507892 SMARCA4P51532 1647 aa43.84■■■■■ 4.61
CCHCR1-225ENST00000507892 BAZ1AQ9NRL2 1556 aaPredicted RBP43.78■■■■■ 4.6
CCHCR1-225ENST00000507892 MROH2BQ7Z745 1585 aa43.59■■■■■ 4.57
CCHCR1-225ENST00000507892 ATAD2BQ9ULI0 1458 aa43.57■■■■■ 4.57
CCHCR1-225ENST00000507892 NCAPD3P42695 1498 aa43.51■■■■■ 4.56
CCHCR1-225ENST00000507892 SMARCA2P51531 1590 aa43.5■■■■■ 4.55
CCHCR1-225ENST00000507892 PEG3Q9GZU2 1588 aa43.38■■■■■ 4.54
CCHCR1-225ENST00000507892 HMGXB3Q12766 1538 aa43.3■■■■■ 4.52
CCHCR1-225ENST00000507892 BAZ1BQ9UIG0 1483 aaKnown RBP43.21■■■■■ 4.51
CCHCR1-225ENST00000507892 WIZO95785 1651 aa43.14■■■■■ 4.5
CCHCR1-225ENST00000507892 RSF1Q96T23 1441 aaPredicted RBP43.12■■■■■ 4.49
CCHCR1-225ENST00000507892 TOP2AP11388 1531 aaKnown RBP42.65■■■■■ 4.42
CCHCR1-225ENST00000507892 NESP48681 1621 aa42.49■■■■■ 4.39
CCHCR1-225ENST00000507892 LAMC3Q9Y6N6 1575 aa42.35■■■■■ 4.37
CCHCR1-225ENST00000507892 CADPSQ9ULU8 1353 aa42.26■■■■■ 4.35
CCHCR1-225ENST00000507892 ERCC6Q03468 1493 aa42.23■■■■■ 4.35
CCHCR1-225ENST00000507892 CCDC88BA6NC98 1476 aa42.17■■■■■ 4.34
CCHCR1-225ENST00000507892 SUPT5HO00267 1087 aaKnown RBP42.14■■■■■ 4.34
CCHCR1-225ENST00000507892 PDS5BQ9NTI5 1447 aa42.04■■■■■ 4.32
CCHCR1-225ENST00000507892 CFTRP13569 1480 aa42.03■■■■■ 4.32
CCHCR1-225ENST00000507892 KIF21AQ7Z4S6 1674 aa42■■■■■ 4.31
CCHCR1-225ENST00000507892 THOC2Q8NI27 1593 aaKnown RBP41.8■■■■■ 4.28
CCHCR1-225ENST00000507892 FANCD2Q9BXW9 1451 aa41.79■■■■■ 4.28
CCHCR1-225ENST00000507892 PRDM2Q13029 1718 aa41.75■■■■■ 4.27
CCHCR1-225ENST00000507892 CUX2O14529 1486 aa41.72■■■■■ 4.27
CCHCR1-225ENST00000507892 CEP164Q9UPV0 1460 aa41.71■■■■■ 4.27
CCHCR1-225ENST00000507892 MRC2Q9UBG0 1479 aa41.63■■■■■ 4.25
CCHCR1-225ENST00000507892 WDR62O43379 1518 aa41.49■■■■■ 4.23
CCHCR1-225ENST00000507892 URB2Q14146 1524 aaKnown RBP41.38■■■■■ 4.21
CCHCR1-225ENST00000507892 TOPBP1Q92547 1522 aa41.13■■■■■ 4.18
CCHCR1-225ENST00000507892 ABCC8Q09428 1581 aa41.09■■■■■ 4.17
CCHCR1-225ENST00000507892 DNMBPQ6XZF7 1577 aa41.08■■■■■ 4.17
CCHCR1-225ENST00000507892 CUX1P39880 1505 aa40.88■■■■■ 4.14
CCHCR1-225ENST00000507892 IFT140Q96RY7 1462 aa40.82■■■■■ 4.12
CCHCR1-225ENST00000507892 POLA1P09884 1462 aaPredicted RBP40.79■■■■■ 4.12
CCHCR1-225ENST00000507892 FGD5Q6ZNL6 1462 aa40.71■■■■■ 4.11
CCHCR1-225ENST00000507892 TARBP1Q13395 1621 aaKnown RBP40.69■■■■■ 4.1
CCHCR1-225ENST00000507892 ZNF608Q9ULD9 1512 aaPredicted RBP40.68■■■■■ 4.1
CCHCR1-225ENST00000507892 RAD54L2Q9Y4B4 1467 aa40.64■■■■■ 4.1
CCHCR1-225ENST00000507892 SOGA1O94964 1423 aa40.63■■■■■ 4.09
CCHCR1-225ENST00000507892 WRNQ14191 1432 aaPredicted RBP eCLIP40.63■■■■■ 4.09
CCHCR1-225ENST00000507892 SYNJ1O43426 1573 aa40.57■■■■■ 4.08
CCHCR1-225ENST00000507892 TOP2BQ02880 1626 aa40.54■■■■■ 4.08
CCHCR1-225ENST00000507892 BIVM-ERCC5R4GMW8 1640 aa40.54■■■■■ 4.08
CCHCR1-225ENST00000507892 EIF4G3O43432 1585 aaKnown RBP40.51■■■■■ 4.08
CCHCR1-225ENST00000507892 AQRO60306 1485 aaKnown RBP eCLIP40.46■■■■■ 4.072e-10■■■■■ 47.9
CCHCR1-225ENST00000507892 TDRD9Q8NDG6 1382 aaKnown RBP40.4■■■■■ 4.06
CCHCR1-225ENST00000507892 WDR97A6NE52 1622 aa40.38■■■■■ 4.05
CCHCR1-225ENST00000507892 DNAJC5Q9H3Z4 198 aa40.35■■■■■ 4.05
CCHCR1-225ENST00000507892 ABCA10Q8WWZ4 1543 aa40.31■■■■■ 4.04
CCHCR1-225ENST00000507892 ABCA5Q8WWZ7 1642 aa40.16■■■■■ 4.02
CCHCR1-225ENST00000507892 GAPVD1Q14C86 1478 aa40.15■■■■■ 4.02
CCHCR1-225ENST00000507892 GRIN2BQ13224 1484 aa40.12■■■■■ 4.01
CCHCR1-225ENST00000507892 PBRM1Q86U86 1689 aa40.09■■■■■ 4.01
CCHCR1-225ENST00000507892 SNAPC4Q5SXM2 1469 aa40.07■■■■■ 4.01
CCHCR1-225ENST00000507892 OSCARQ8IYS5 282 aa40.04■■■■■ 4
CCHCR1-225ENST00000507892 CHD1O14646 1710 aa40■■■■□ 3.99
CCHCR1-225ENST00000507892 MAGI1Q96QZ7 1491 aaPredicted RBP40■■■■□ 3.99
CCHCR1-225ENST00000507892 FBLN2P98095 1184 aa39.95■■■■□ 3.99
CCHCR1-225ENST00000507892 SYNJ2O15056 1496 aa39.85■■■■□ 3.97
CCHCR1-225ENST00000507892 CHMP7Q8WUX9 453 aaPredicted RBP39.84■■■■□ 3.97
CCHCR1-225ENST00000507892 ERICH3Q5RHP9 1530 aa39.81■■■■□ 3.96
CCHCR1-225ENST00000507892 TRIM41Q8WV44 630 aa39.77■■■■□ 3.96
CCHCR1-225ENST00000507892 ADAMTS12P58397 1594 aa39.76■■■■□ 3.96
CCHCR1-225ENST00000507892 KIF27Q86VH2 1401 aa39.76■■■■□ 3.96
CCHCR1-225ENST00000507892 FHAD1B1AJZ9 1412 aa39.68■■■■□ 3.94
CCHCR1-225ENST00000507892 IGF1RP08069 1367 aa39.62■■■■□ 3.93
CCHCR1-225ENST00000507892 GRIN2AQ12879 1464 aa39.62■■■■□ 3.93
CCHCR1-225ENST00000507892 CLASP1Q7Z460 1538 aa39.54■■■■□ 3.92
CCHCR1-225ENST00000507892 RUSC2Q8N2Y8 1516 aa39.52■■■■□ 3.92
CCHCR1-225ENST00000507892 CUL7Q14999 1698 aa39.48■■■■□ 3.91
CCHCR1-225ENST00000507892 CEP170Q5SW79 1584 aa39.44■■■■□ 3.9
CCHCR1-225ENST00000507892 NUP160Q12769 1436 aa39.43■■■■□ 3.9
CCHCR1-225ENST00000507892 RIMBP3CA6NJZ7 1639 aa39.42■■■■□ 3.9
CCHCR1-225ENST00000507892 RIMBP3BA6NNM3 1639 aa39.42■■■■□ 3.9
CCHCR1-225ENST00000507892 RIMBP3Q9UFD9 1639 aa39.42■■■■□ 3.9
CCHCR1-225ENST00000507892 ARHGEF11O15085 1522 aa39.4■■■■□ 3.9
CCHCR1-225ENST00000507892 CHIC1Q5VXU3 224 aa39.38■■■■□ 3.89
CCHCR1-225ENST00000507892 CARMIL1Q5VZK9 1371 aa39.37■■■■□ 3.89
CCHCR1-225ENST00000507892 RAPGEF2Q9Y4G8 1499 aa39.15■■■■□ 3.86
CCHCR1-225ENST00000507892 SHROOM2Q13796 1616 aa39.13■■■■□ 3.85
CCHCR1-225ENST00000507892 ARAP1Q96P48 1450 aa39.11■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms