RNA–Protein interactions for RNA: ENST00000507723.1

TMED9-204, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-204ENST00000507723 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
TMED9-204ENST00000507723 ABCC9O60706 1549 aa32.76■■■□□ 2.83
TMED9-204ENST00000507723 CCDC180Q9P1Z9 1646 aa32.48■■■□□ 2.79
TMED9-204ENST00000507723 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
TMED9-204ENST00000507723 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
TMED9-204ENST00000507723 NACADO15069 1562 aa30.82■■■□□ 2.52
TMED9-204ENST00000507723 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
TMED9-204ENST00000507723 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.46
TMED9-204ENST00000507723 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
TMED9-204ENST00000507723 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
TMED9-204ENST00000507723 BICRAQ9NZM4 1560 aa30.09■■■□□ 2.41
TMED9-204ENST00000507723 SHROOM4Q9ULL8 1493 aa29.85■■■□□ 2.37
TMED9-204ENST00000507723 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
TMED9-204ENST00000507723 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
TMED9-204ENST00000507723 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
TMED9-204ENST00000507723 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
TMED9-204ENST00000507723 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
TMED9-204ENST00000507723 EIF4G1Q04637 1599 aaKnown RBP29.45■■■□□ 2.31
TMED9-204ENST00000507723 DNAJC5Q9H3Z4 198 aa28.75■■■□□ 2.19
TMED9-204ENST00000507723 CUX2O14529 1486 aa28.45■■■□□ 2.14
TMED9-204ENST00000507723 NCAPD3P42695 1498 aa28.45■■■□□ 2.14
TMED9-204ENST00000507723 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
TMED9-204ENST00000507723 ATAD2BQ9ULI0 1458 aa28.28■■■□□ 2.12
TMED9-204ENST00000507723 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
TMED9-204ENST00000507723 HMGXB3Q12766 1538 aa28.2■■■□□ 2.1
TMED9-204ENST00000507723 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
TMED9-204ENST00000507723 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
TMED9-204ENST00000507723 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
TMED9-204ENST00000507723 NESP48681 1621 aa28■■■□□ 2.07
TMED9-204ENST00000507723 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
TMED9-204ENST00000507723 LAMC3Q9Y6N6 1575 aa27.86■■■□□ 2.05
TMED9-204ENST00000507723 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
TMED9-204ENST00000507723 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
TMED9-204ENST00000507723 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
TMED9-204ENST00000507723 KIF21AQ7Z4S6 1674 aa27.62■■■□□ 2.01
TMED9-204ENST00000507723 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
TMED9-204ENST00000507723 MRC2Q9UBG0 1479 aa27.49■■□□□ 1.99
TMED9-204ENST00000507723 WDR62O43379 1518 aa27.41■■□□□ 1.98
TMED9-204ENST00000507723 TRIM41Q8WV44 630 aa27.36■■□□□ 1.97
TMED9-204ENST00000507723 CEP164Q9UPV0 1460 aa27.33■■□□□ 1.97
TMED9-204ENST00000507723 WIZO95785 1651 aa27.33■■□□□ 1.97
TMED9-204ENST00000507723 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
TMED9-204ENST00000507723 CFTRP13569 1480 aa27.18■■□□□ 1.94
TMED9-204ENST00000507723 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
TMED9-204ENST00000507723 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
TMED9-204ENST00000507723 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
TMED9-204ENST00000507723 URB2Q14146 1524 aaKnown RBP26.99■■□□□ 1.91
TMED9-204ENST00000507723 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
TMED9-204ENST00000507723 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
TMED9-204ENST00000507723 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
TMED9-204ENST00000507723 ABCC8Q09428 1581 aa26.7■■□□□ 1.86
TMED9-204ENST00000507723 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
TMED9-204ENST00000507723 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
TMED9-204ENST00000507723 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
TMED9-204ENST00000507723 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
TMED9-204ENST00000507723 TOPBP1Q92547 1522 aa26.67■■□□□ 1.86
TMED9-204ENST00000507723 ARHGEF11O15085 1522 aa26.6■■□□□ 1.85
TMED9-204ENST00000507723 DNMBPQ6XZF7 1577 aa26.56■■□□□ 1.84
TMED9-204ENST00000507723 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
TMED9-204ENST00000507723 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
TMED9-204ENST00000507723 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.822e-7■■■■■ 26.8
TMED9-204ENST00000507723 TARBP1Q13395 1621 aaKnown RBP26.42■■□□□ 1.82
TMED9-204ENST00000507723 FBLN2P98095 1184 aa26.4■■□□□ 1.82
TMED9-204ENST00000507723 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
TMED9-204ENST00000507723 CHD1O14646 1710 aa26.36■■□□□ 1.81
TMED9-204ENST00000507723 TRHP20396 242 aaPredicted RBP26.31■■□□□ 1.8
TMED9-204ENST00000507723 ARAP1Q96P48 1450 aa26.3■■□□□ 1.8
TMED9-204ENST00000507723 SOGA1O94964 1423 aa26.29■■□□□ 1.8
TMED9-204ENST00000507723 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
TMED9-204ENST00000507723 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
TMED9-204ENST00000507723 TDRD9Q8NDG6 1382 aaKnown RBP26.24■■□□□ 1.79
TMED9-204ENST00000507723 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
TMED9-204ENST00000507723 CHMP7Q8WUX9 453 aaPredicted RBP26.19■■□□□ 1.78
TMED9-204ENST00000507723 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
TMED9-204ENST00000507723 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
TMED9-204ENST00000507723 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
TMED9-204ENST00000507723 GRIN2BQ13224 1484 aa26.12■■□□□ 1.77
TMED9-204ENST00000507723 CLASP1Q7Z460 1538 aa26.11■■□□□ 1.77
TMED9-204ENST00000507723 CUX1P39880 1505 aa26.06■■□□□ 1.76
TMED9-204ENST00000507723 SYNJ2O15056 1496 aa26.05■■□□□ 1.76
TMED9-204ENST00000507723 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
TMED9-204ENST00000507723 PBRM1Q86U86 1689 aa25.9■■□□□ 1.74
TMED9-204ENST00000507723 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
TMED9-204ENST00000507723 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
TMED9-204ENST00000507723 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
TMED9-204ENST00000507723 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
TMED9-204ENST00000507723 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
TMED9-204ENST00000507723 NUP160Q12769 1436 aa25.68■■□□□ 1.7
TMED9-204ENST00000507723 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
TMED9-204ENST00000507723 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
TMED9-204ENST00000507723 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
TMED9-204ENST00000507723 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
TMED9-204ENST00000507723 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
TMED9-204ENST00000507723 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
TMED9-204ENST00000507723 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
TMED9-204ENST00000507723 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
TMED9-204ENST00000507723 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
TMED9-204ENST00000507723 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
TMED9-204ENST00000507723 JPH4Q96JJ6 628 aa25.44■■□□□ 1.66
TMED9-204ENST00000507723 NPM1P06748 294 aaKnown RBP eCLIP25.38■■□□□ 1.653e-6■■□□□ 14.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms