RNA–Protein interactions for RNA: ENST00000507586.1

PACSIN2-211, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 3

Gene PACSIN2, Length 362 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-211ENST00000507586 NISCHQ9Y2I1 1504 aa15.68■□□□□ 0.1
PACSIN2-211ENST00000507586 ABCC9O60706 1549 aa14.66□□□□□ -0.06
PACSIN2-211ENST00000507586 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.12
PACSIN2-211ENST00000507586 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
PACSIN2-211ENST00000507586 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.19
PACSIN2-211ENST00000507586 NACADO15069 1562 aa13.65□□□□□ -0.22
PACSIN2-211ENST00000507586 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
PACSIN2-211ENST00000507586 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
PACSIN2-211ENST00000507586 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
PACSIN2-211ENST00000507586 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
PACSIN2-211ENST00000507586 UNC13AQ9UPW8 1703 aa13.36□□□□□ -0.27
PACSIN2-211ENST00000507586 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
PACSIN2-211ENST00000507586 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
PACSIN2-211ENST00000507586 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
PACSIN2-211ENST00000507586 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
PACSIN2-211ENST00000507586 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
PACSIN2-211ENST00000507586 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
PACSIN2-211ENST00000507586 CUX2O14529 1486 aa12.93□□□□□ -0.34
PACSIN2-211ENST00000507586 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
PACSIN2-211ENST00000507586 ZCCHC6Q5VYS8 1495 aaKnown RBP12.89□□□□□ -0.35
PACSIN2-211ENST00000507586 ERCC6Q03468 1493 aa12.78□□□□□ -0.36
PACSIN2-211ENST00000507586 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
PACSIN2-211ENST00000507586 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
PACSIN2-211ENST00000507586 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.41
PACSIN2-211ENST00000507586 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
PACSIN2-211ENST00000507586 SMARCA2P51531 1590 aa12.44□□□□□ -0.42
PACSIN2-211ENST00000507586 NESP48681 1621 aa12.43□□□□□ -0.42
PACSIN2-211ENST00000507586 THOC2Q8NI27 1593 aaKnown RBP12.4□□□□□ -0.42
PACSIN2-211ENST00000507586 PDS5BQ9NTI5 1447 aa12.38□□□□□ -0.43
PACSIN2-211ENST00000507586 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
PACSIN2-211ENST00000507586 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
PACSIN2-211ENST00000507586 OSCARQ8IYS5 282 aa12.31□□□□□ -0.44
PACSIN2-211ENST00000507586 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
PACSIN2-211ENST00000507586 BAZ1AQ9NRL2 1556 aaPredicted RBP12.24□□□□□ -0.45
PACSIN2-211ENST00000507586 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
PACSIN2-211ENST00000507586 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
PACSIN2-211ENST00000507586 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
PACSIN2-211ENST00000507586 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
PACSIN2-211ENST00000507586 WDR62O43379 1518 aa12.2□□□□□ -0.46
PACSIN2-211ENST00000507586 CEP164Q9UPV0 1460 aa12.1□□□□□ -0.47
PACSIN2-211ENST00000507586 AEBP2Q6ZN18 517 aaPredicted RBP12.06□□□□□ -0.48
PACSIN2-211ENST00000507586 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
PACSIN2-211ENST00000507586 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
PACSIN2-211ENST00000507586 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
PACSIN2-211ENST00000507586 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
PACSIN2-211ENST00000507586 MROH2BQ7Z745 1585 aa12.02□□□□□ -0.49
PACSIN2-211ENST00000507586 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
PACSIN2-211ENST00000507586 ARHGEF11O15085 1522 aa12□□□□□ -0.49
PACSIN2-211ENST00000507586 CYB5RLQ6IPT4 315 aa11.98□□□□□ -0.49
PACSIN2-211ENST00000507586 CFTRP13569 1480 aa11.95□□□□□ -0.5
PACSIN2-211ENST00000507586 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
PACSIN2-211ENST00000507586 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
PACSIN2-211ENST00000507586 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
PACSIN2-211ENST00000507586 WIZO95785 1651 aa11.83□□□□□ -0.52
PACSIN2-211ENST00000507586 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
PACSIN2-211ENST00000507586 ZNF608Q9ULD9 1512 aaPredicted RBP11.82□□□□□ -0.52
PACSIN2-211ENST00000507586 ABCC8Q09428 1581 aa11.79□□□□□ -0.52
PACSIN2-211ENST00000507586 FBLN2P98095 1184 aa11.77□□□□□ -0.53
PACSIN2-211ENST00000507586 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
PACSIN2-211ENST00000507586 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
PACSIN2-211ENST00000507586 TOP2AP11388 1531 aaKnown RBP11.73□□□□□ -0.53
PACSIN2-211ENST00000507586 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
PACSIN2-211ENST00000507586 CHD1O14646 1710 aa11.7□□□□□ -0.54
PACSIN2-211ENST00000507586 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
PACSIN2-211ENST00000507586 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
PACSIN2-211ENST00000507586 DNMBPQ6XZF7 1577 aa11.66□□□□□ -0.54
PACSIN2-211ENST00000507586 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
PACSIN2-211ENST00000507586 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
PACSIN2-211ENST00000507586 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
PACSIN2-211ENST00000507586 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
PACSIN2-211ENST00000507586 CCDC88BA6NC98 1476 aa11.58□□□□□ -0.56
PACSIN2-211ENST00000507586 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
PACSIN2-211ENST00000507586 MAGI1Q96QZ7 1491 aaPredicted RBP11.58□□□□□ -0.56
PACSIN2-211ENST00000507586 SOGA1O94964 1423 aa11.57□□□□□ -0.56
PACSIN2-211ENST00000507586 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
PACSIN2-211ENST00000507586 SNAPC4Q5SXM2 1469 aa11.57□□□□□ -0.56
PACSIN2-211ENST00000507586 TDRD9Q8NDG6 1382 aaKnown RBP11.56□□□□□ -0.56
PACSIN2-211ENST00000507586 SYNJ2O15056 1496 aa11.54□□□□□ -0.56
PACSIN2-211ENST00000507586 GRIN2BQ13224 1484 aa11.53□□□□□ -0.56
PACSIN2-211ENST00000507586 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
PACSIN2-211ENST00000507586 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
PACSIN2-211ENST00000507586 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
PACSIN2-211ENST00000507586 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
PACSIN2-211ENST00000507586 FAM69CQ0P6D2 419 aa11.38□□□□□ -0.59
PACSIN2-211ENST00000507586 KDM4FA0A1W2PPD8 638 aa11.36□□□□□ -0.59
PACSIN2-211ENST00000507586 PBRM1Q86U86 1689 aa11.34□□□□□ -0.59
PACSIN2-211ENST00000507586 CEP170Q5SW79 1584 aa11.34□□□□□ -0.59
PACSIN2-211ENST00000507586 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
PACSIN2-211ENST00000507586 NUP160Q12769 1436 aa11.34□□□□□ -0.59
PACSIN2-211ENST00000507586 ABCC10Q5T3U5 1492 aa11.33□□□□□ -0.6
PACSIN2-211ENST00000507586 KIF13AQ9H1H9 1805 aa11.33□□□□□ -0.6
PACSIN2-211ENST00000507586 CUX1P39880 1505 aa11.33□□□□□ -0.6
PACSIN2-211ENST00000507586 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
PACSIN2-211ENST00000507586 ERCC6L2Q5T890 1561 aa11.32□□□□□ -0.6
PACSIN2-211ENST00000507586 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
PACSIN2-211ENST00000507586 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
PACSIN2-211ENST00000507586 KDM6BO15054 1643 aa11.28□□□□□ -0.6
PACSIN2-211ENST00000507586 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
PACSIN2-211ENST00000507586 FHAD1B1AJZ9 1412 aa11.28□□□□□ -0.6
PACSIN2-211ENST00000507586 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms