RNA–Protein interactions for RNA: ENST00000507573.1

CNBP-209, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 2

Gene CNBP, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-209ENST00000507573 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.85
CNBP-209ENST00000507573 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
CNBP-209ENST00000507573 ABCC9O60706 1549 aa28.89■■■□□ 2.22
CNBP-209ENST00000507573 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
CNBP-209ENST00000507573 NACADO15069 1562 aa27.65■■■□□ 2.02
CNBP-209ENST00000507573 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
CNBP-209ENST00000507573 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.98
CNBP-209ENST00000507573 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
CNBP-209ENST00000507573 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
CNBP-209ENST00000507573 DCAF1Q9Y4B6 1507 aa27.16■■□□□ 1.94
CNBP-209ENST00000507573 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
CNBP-209ENST00000507573 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
CNBP-209ENST00000507573 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
CNBP-209ENST00000507573 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
CNBP-209ENST00000507573 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
CNBP-209ENST00000507573 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
CNBP-209ENST00000507573 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
CNBP-209ENST00000507573 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
CNBP-209ENST00000507573 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
CNBP-209ENST00000507573 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
CNBP-209ENST00000507573 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
CNBP-209ENST00000507573 ATAD2BQ9ULI0 1458 aa25.44■■□□□ 1.66
CNBP-209ENST00000507573 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
CNBP-209ENST00000507573 HMGXB3Q12766 1538 aa25.36■■□□□ 1.65
CNBP-209ENST00000507573 PEG3Q9GZU2 1588 aa25.32■■□□□ 1.64
CNBP-209ENST00000507573 MROH2BQ7Z745 1585 aa25.27■■□□□ 1.64
CNBP-209ENST00000507573 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
CNBP-209ENST00000507573 WIZO95785 1651 aa25.04■■□□□ 1.6
CNBP-209ENST00000507573 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
CNBP-209ENST00000507573 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
CNBP-209ENST00000507573 NESP48681 1621 aa24.94■■□□□ 1.58
CNBP-209ENST00000507573 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
CNBP-209ENST00000507573 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
CNBP-209ENST00000507573 CUX2O14529 1486 aa24.8■■□□□ 1.56
CNBP-209ENST00000507573 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
CNBP-209ENST00000507573 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
CNBP-209ENST00000507573 CADPSQ9ULU8 1353 aa24.69■■□□□ 1.54
CNBP-209ENST00000507573 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
CNBP-209ENST00000507573 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
CNBP-209ENST00000507573 CFTRP13569 1480 aa24.51■■□□□ 1.51
CNBP-209ENST00000507573 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
CNBP-209ENST00000507573 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
CNBP-209ENST00000507573 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
CNBP-209ENST00000507573 FANCD2Q9BXW9 1451 aa24.43■■□□□ 1.5
CNBP-209ENST00000507573 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
CNBP-209ENST00000507573 WDR62O43379 1518 aa24.4■■□□□ 1.5
CNBP-209ENST00000507573 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
CNBP-209ENST00000507573 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
CNBP-209ENST00000507573 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
CNBP-209ENST00000507573 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
CNBP-209ENST00000507573 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
CNBP-209ENST00000507573 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
CNBP-209ENST00000507573 ZNF608Q9ULD9 1512 aaPredicted RBP23.83■■□□□ 1.41
CNBP-209ENST00000507573 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
CNBP-209ENST00000507573 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
CNBP-209ENST00000507573 EIF4G3O43432 1585 aaKnown RBP23.78■■□□□ 1.4
CNBP-209ENST00000507573 CUX1P39880 1505 aa23.74■■□□□ 1.39
CNBP-209ENST00000507573 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
CNBP-209ENST00000507573 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
CNBP-209ENST00000507573 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
CNBP-209ENST00000507573 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
CNBP-209ENST00000507573 SOGA1O94964 1423 aa23.67■■□□□ 1.38
CNBP-209ENST00000507573 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.383e-7■■■□□ 18.6
CNBP-209ENST00000507573 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
CNBP-209ENST00000507573 CHD1O14646 1710 aa23.59■■□□□ 1.37
CNBP-209ENST00000507573 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
CNBP-209ENST00000507573 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
CNBP-209ENST00000507573 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
CNBP-209ENST00000507573 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
CNBP-209ENST00000507573 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
CNBP-209ENST00000507573 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
CNBP-209ENST00000507573 ABCA10Q8WWZ4 1543 aa23.46■■□□□ 1.35
CNBP-209ENST00000507573 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
CNBP-209ENST00000507573 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
CNBP-209ENST00000507573 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
CNBP-209ENST00000507573 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
CNBP-209ENST00000507573 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
CNBP-209ENST00000507573 FBLN2P98095 1184 aa23.4■■□□□ 1.34
CNBP-209ENST00000507573 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
CNBP-209ENST00000507573 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
CNBP-209ENST00000507573 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
CNBP-209ENST00000507573 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
CNBP-209ENST00000507573 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
CNBP-209ENST00000507573 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
CNBP-209ENST00000507573 CHMP7Q8WUX9 453 aaPredicted RBP23.31■■□□□ 1.32
CNBP-209ENST00000507573 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
CNBP-209ENST00000507573 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
CNBP-209ENST00000507573 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
CNBP-209ENST00000507573 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
CNBP-209ENST00000507573 GRIN2AQ12879 1464 aa23.15■■□□□ 1.3
CNBP-209ENST00000507573 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
CNBP-209ENST00000507573 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
CNBP-209ENST00000507573 CYB5RLQ6IPT4 315 aa23.08■■□□□ 1.29
CNBP-209ENST00000507573 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
CNBP-209ENST00000507573 NUP160Q12769 1436 aa23.05■■□□□ 1.28
CNBP-209ENST00000507573 KIF27Q86VH2 1401 aa23■■□□□ 1.27
CNBP-209ENST00000507573 CUL7Q14999 1698 aa22.97■■□□□ 1.27
CNBP-209ENST00000507573 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
CNBP-209ENST00000507573 IGF1RP08069 1367 aa22.91■■□□□ 1.26
CNBP-209ENST00000507573 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms