RNA–Protein interactions for RNA: ENST00000507550.5

CASP6-206, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 892 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-206ENST00000507550 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
CASP6-206ENST00000507550 ABCC9O60706 1549 aa30.83■■■□□ 2.53
CASP6-206ENST00000507550 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
CASP6-206ENST00000507550 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
CASP6-206ENST00000507550 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
CASP6-206ENST00000507550 NACADO15069 1562 aa28.67■■■□□ 2.18
CASP6-206ENST00000507550 PABPN1Q86U42 306 aaKnown RBP eCLIP28.65■■■□□ 2.18
CASP6-206ENST00000507550 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
CASP6-206ENST00000507550 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
CASP6-206ENST00000507550 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
CASP6-206ENST00000507550 BICRAQ9NZM4 1560 aa28.23■■■□□ 2.11
CASP6-206ENST00000507550 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
CASP6-206ENST00000507550 CECR2Q9BXF3 1484 aa27.82■■■□□ 2.04
CASP6-206ENST00000507550 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
CASP6-206ENST00000507550 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
CASP6-206ENST00000507550 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
CASP6-206ENST00000507550 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
CASP6-206ENST00000507550 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
CASP6-206ENST00000507550 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
CASP6-206ENST00000507550 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
CASP6-206ENST00000507550 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
CASP6-206ENST00000507550 CUX2O14529 1486 aa26.76■■□□□ 1.87
CASP6-206ENST00000507550 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
CASP6-206ENST00000507550 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
CASP6-206ENST00000507550 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
CASP6-206ENST00000507550 NESP48681 1621 aa26.32■■□□□ 1.8
CASP6-206ENST00000507550 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
CASP6-206ENST00000507550 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
CASP6-206ENST00000507550 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
CASP6-206ENST00000507550 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
CASP6-206ENST00000507550 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
CASP6-206ENST00000507550 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
CASP6-206ENST00000507550 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
CASP6-206ENST00000507550 BAZ1AQ9NRL2 1556 aaPredicted RBP25.92■■□□□ 1.74
CASP6-206ENST00000507550 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
CASP6-206ENST00000507550 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
CASP6-206ENST00000507550 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
CASP6-206ENST00000507550 MROH2BQ7Z745 1585 aa25.74■■□□□ 1.71
CASP6-206ENST00000507550 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
CASP6-206ENST00000507550 MRC2Q9UBG0 1479 aa25.68■■□□□ 1.7
CASP6-206ENST00000507550 WDR62O43379 1518 aa25.63■■□□□ 1.69
CASP6-206ENST00000507550 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
CASP6-206ENST00000507550 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
CASP6-206ENST00000507550 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
CASP6-206ENST00000507550 WIZO95785 1651 aa25.37■■□□□ 1.65
CASP6-206ENST00000507550 CFTRP13569 1480 aa25.27■■□□□ 1.64
CASP6-206ENST00000507550 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
CASP6-206ENST00000507550 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
CASP6-206ENST00000507550 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
CASP6-206ENST00000507550 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
CASP6-206ENST00000507550 ARHGEF11O15085 1522 aa25.07■■□□□ 1.6
CASP6-206ENST00000507550 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
CASP6-206ENST00000507550 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
CASP6-206ENST00000507550 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
CASP6-206ENST00000507550 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
CASP6-206ENST00000507550 CYB5RLQ6IPT4 315 aa24.95■■□□□ 1.58
CASP6-206ENST00000507550 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
CASP6-206ENST00000507550 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
CASP6-206ENST00000507550 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
CASP6-206ENST00000507550 EIF4G3O43432 1585 aaKnown RBP24.81■■□□□ 1.56
CASP6-206ENST00000507550 ARAP1Q96P48 1450 aa24.79■■□□□ 1.56
CASP6-206ENST00000507550 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
CASP6-206ENST00000507550 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
CASP6-206ENST00000507550 ABCC8Q09428 1581 aa24.7■■□□□ 1.54
CASP6-206ENST00000507550 CHD1O14646 1710 aa24.69■■□□□ 1.54
CASP6-206ENST00000507550 FBLN2P98095 1184 aa24.69■■□□□ 1.54
CASP6-206ENST00000507550 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
CASP6-206ENST00000507550 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
CASP6-206ENST00000507550 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
CASP6-206ENST00000507550 TDRD9Q8NDG6 1382 aaKnown RBP24.51■■□□□ 1.51
CASP6-206ENST00000507550 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
CASP6-206ENST00000507550 CLASP1Q7Z460 1538 aa24.45■■□□□ 1.51
CASP6-206ENST00000507550 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.5
CASP6-206ENST00000507550 SOGA1O94964 1423 aa24.44■■□□□ 1.5
CASP6-206ENST00000507550 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
CASP6-206ENST00000507550 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
CASP6-206ENST00000507550 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
CASP6-206ENST00000507550 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CASP6-206ENST00000507550 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
CASP6-206ENST00000507550 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
CASP6-206ENST00000507550 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
CASP6-206ENST00000507550 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
CASP6-206ENST00000507550 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
CASP6-206ENST00000507550 CUX1P39880 1505 aa24.2■■□□□ 1.47
CASP6-206ENST00000507550 SENP3Q9H4L4 574 aaPredicted RBP24.1■■□□□ 1.45
CASP6-206ENST00000507550 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.44
CASP6-206ENST00000507550 PBRM1Q86U86 1689 aa24.07■■□□□ 1.44
CASP6-206ENST00000507550 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
CASP6-206ENST00000507550 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
CASP6-206ENST00000507550 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
CASP6-206ENST00000507550 CEP170Q5SW79 1584 aa23.95■■□□□ 1.42
CASP6-206ENST00000507550 NUP160Q12769 1436 aa23.93■■□□□ 1.42
CASP6-206ENST00000507550 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
CASP6-206ENST00000507550 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
CASP6-206ENST00000507550 KIF13AQ9H1H9 1805 aa23.82■■□□□ 1.4
CASP6-206ENST00000507550 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
CASP6-206ENST00000507550 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
CASP6-206ENST00000507550 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
CASP6-206ENST00000507550 FAM69CQ0P6D2 419 aa23.73■■□□□ 1.39
CASP6-206ENST00000507550 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms