RNA–Protein interactions for RNA: ENST00000507520.5

GPM6A-212, Transcript of glycoprotein M6A, humanhuman

TSL 4

Gene GPM6A, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6A-212ENST00000507520 NISCHQ9Y2I1 1504 aa25.52■■□□□ 1.68
GPM6A-212ENST00000507520 ABCC9O60706 1549 aa23.67■■□□□ 1.38
GPM6A-212ENST00000507520 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
GPM6A-212ENST00000507520 DNAJC5BQ9UF47 199 aa22.56■■□□□ 1.2
GPM6A-212ENST00000507520 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
GPM6A-212ENST00000507520 NACADO15069 1562 aa21.99■■□□□ 1.11
GPM6A-212ENST00000507520 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
GPM6A-212ENST00000507520 UNC13AQ9UPW8 1703 aa21.9■■□□□ 1.1
GPM6A-212ENST00000507520 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
GPM6A-212ENST00000507520 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
GPM6A-212ENST00000507520 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
GPM6A-212ENST00000507520 CC2D2AQ9P2K1 1620 aa21.36■■□□□ 1.01
GPM6A-212ENST00000507520 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
GPM6A-212ENST00000507520 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
GPM6A-212ENST00000507520 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
GPM6A-212ENST00000507520 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
GPM6A-212ENST00000507520 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
GPM6A-212ENST00000507520 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
GPM6A-212ENST00000507520 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
GPM6A-212ENST00000507520 CUX2O14529 1486 aa20.56■□□□□ 0.88
GPM6A-212ENST00000507520 ERCC6Q03468 1493 aa20.5■□□□□ 0.87
GPM6A-212ENST00000507520 NCAPD3P42695 1498 aa20.25■□□□□ 0.83
GPM6A-212ENST00000507520 NESP48681 1621 aa20.17■□□□□ 0.82
GPM6A-212ENST00000507520 ATAD2BQ9ULI0 1458 aa20.15■□□□□ 0.82
GPM6A-212ENST00000507520 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
GPM6A-212ENST00000507520 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
GPM6A-212ENST00000507520 TRIM41Q8WV44 630 aa20.08■□□□□ 0.81
GPM6A-212ENST00000507520 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.8
GPM6A-212ENST00000507520 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
GPM6A-212ENST00000507520 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
GPM6A-212ENST00000507520 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
GPM6A-212ENST00000507520 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
GPM6A-212ENST00000507520 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
GPM6A-212ENST00000507520 PDS5BQ9NTI5 1447 aa19.83■□□□□ 0.76
GPM6A-212ENST00000507520 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
GPM6A-212ENST00000507520 MRC2Q9UBG0 1479 aa19.7■□□□□ 0.74
GPM6A-212ENST00000507520 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
GPM6A-212ENST00000507520 WDR62O43379 1518 aa19.66■□□□□ 0.74
GPM6A-212ENST00000507520 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
GPM6A-212ENST00000507520 OSCARQ8IYS5 282 aa19.55■□□□□ 0.72
GPM6A-212ENST00000507520 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
GPM6A-212ENST00000507520 WIZO95785 1651 aa19.47■□□□□ 0.71
GPM6A-212ENST00000507520 FANCD2Q9BXW9 1451 aa19.45■□□□□ 0.7
GPM6A-212ENST00000507520 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
GPM6A-212ENST00000507520 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
GPM6A-212ENST00000507520 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
GPM6A-212ENST00000507520 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
GPM6A-212ENST00000507520 CFTRP13569 1480 aa19.29■□□□□ 0.68
GPM6A-212ENST00000507520 ARHGEF11O15085 1522 aa19.25■□□□□ 0.67
GPM6A-212ENST00000507520 PRDM2Q13029 1718 aa19.25■□□□□ 0.67
GPM6A-212ENST00000507520 ZNF608Q9ULD9 1512 aaPredicted RBP19.16■□□□□ 0.66
GPM6A-212ENST00000507520 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
GPM6A-212ENST00000507520 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
GPM6A-212ENST00000507520 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
GPM6A-212ENST00000507520 IFT140Q96RY7 1462 aa19.13■□□□□ 0.65
GPM6A-212ENST00000507520 CHD1O14646 1710 aa19.11■□□□□ 0.65
GPM6A-212ENST00000507520 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.65
GPM6A-212ENST00000507520 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
GPM6A-212ENST00000507520 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
GPM6A-212ENST00000507520 ARAP1Q96P48 1450 aa19.01■□□□□ 0.63
GPM6A-212ENST00000507520 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
GPM6A-212ENST00000507520 FBLN2P98095 1184 aa18.97■□□□□ 0.63
GPM6A-212ENST00000507520 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
GPM6A-212ENST00000507520 AQRO60306 1485 aaKnown RBP eCLIP18.93■□□□□ 0.62
GPM6A-212ENST00000507520 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
GPM6A-212ENST00000507520 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
GPM6A-212ENST00000507520 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
GPM6A-212ENST00000507520 POLA1P09884 1462 aaPredicted RBP18.78■□□□□ 0.6
GPM6A-212ENST00000507520 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
GPM6A-212ENST00000507520 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
GPM6A-212ENST00000507520 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
GPM6A-212ENST00000507520 SNAPC4Q5SXM2 1469 aa18.73■□□□□ 0.59
GPM6A-212ENST00000507520 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
GPM6A-212ENST00000507520 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
GPM6A-212ENST00000507520 SOGA1O94964 1423 aa18.7■□□□□ 0.58
GPM6A-212ENST00000507520 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
GPM6A-212ENST00000507520 MAGI1Q96QZ7 1491 aaPredicted RBP18.65■□□□□ 0.58
GPM6A-212ENST00000507520 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
GPM6A-212ENST00000507520 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
GPM6A-212ENST00000507520 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
GPM6A-212ENST00000507520 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
GPM6A-212ENST00000507520 SYNJ2O15056 1496 aa18.58■□□□□ 0.57
GPM6A-212ENST00000507520 CUX1P39880 1505 aa18.5■□□□□ 0.55
GPM6A-212ENST00000507520 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
GPM6A-212ENST00000507520 KIF13AQ9H1H9 1805 aa18.44■□□□□ 0.54
GPM6A-212ENST00000507520 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
GPM6A-212ENST00000507520 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
GPM6A-212ENST00000507520 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
GPM6A-212ENST00000507520 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
GPM6A-212ENST00000507520 ADAMTS12P58397 1594 aa18.31■□□□□ 0.52
GPM6A-212ENST00000507520 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
GPM6A-212ENST00000507520 NUP160Q12769 1436 aa18.28■□□□□ 0.52
GPM6A-212ENST00000507520 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
GPM6A-212ENST00000507520 FAM69CQ0P6D2 419 aa18.2■□□□□ 0.5
GPM6A-212ENST00000507520 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
GPM6A-212ENST00000507520 PRG4Q92954 1404 aaPredicted RBP18.19■□□□□ 0.5
GPM6A-212ENST00000507520 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
GPM6A-212ENST00000507520 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
GPM6A-212ENST00000507520 KDM6BO15054 1643 aa18.16■□□□□ 0.5
GPM6A-212ENST00000507520 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms