RNA–Protein interactions for RNA: ENST00000507402.5

ZCCHC9-208, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 2

Gene ZCCHC9, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-208ENST00000507402 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
ZCCHC9-208ENST00000507402 AEBP2Q6ZN18 517 aaPredicted RBP29.33■■■□□ 2.29
ZCCHC9-208ENST00000507402 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
ZCCHC9-208ENST00000507402 ABCC9O60706 1549 aa26.65■■□□□ 1.86
ZCCHC9-208ENST00000507402 CCDC180Q9P1Z9 1646 aa26.49■■□□□ 1.83
ZCCHC9-208ENST00000507402 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
ZCCHC9-208ENST00000507402 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
ZCCHC9-208ENST00000507402 NACADO15069 1562 aa25.04■■□□□ 1.6
ZCCHC9-208ENST00000507402 DNAJC5BQ9UF47 199 aa25.01■■□□□ 1.59
ZCCHC9-208ENST00000507402 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
ZCCHC9-208ENST00000507402 SENP3Q9H4L4 574 aaPredicted RBP24.82■■□□□ 1.56
ZCCHC9-208ENST00000507402 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
ZCCHC9-208ENST00000507402 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
ZCCHC9-208ENST00000507402 PHF23Q9BUL5 403 aaPredicted RBP24.57■■□□□ 1.52
ZCCHC9-208ENST00000507402 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
ZCCHC9-208ENST00000507402 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
ZCCHC9-208ENST00000507402 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
ZCCHC9-208ENST00000507402 SCRIBQ14160 1630 aa24.27■■□□□ 1.48
ZCCHC9-208ENST00000507402 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
ZCCHC9-208ENST00000507402 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
ZCCHC9-208ENST00000507402 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
ZCCHC9-208ENST00000507402 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
ZCCHC9-208ENST00000507402 FOXD1Q16676 465 aa23.41■■□□□ 1.34
ZCCHC9-208ENST00000507402 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
ZCCHC9-208ENST00000507402 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
ZCCHC9-208ENST00000507402 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
ZCCHC9-208ENST00000507402 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
ZCCHC9-208ENST00000507402 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
ZCCHC9-208ENST00000507402 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
ZCCHC9-208ENST00000507402 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
ZCCHC9-208ENST00000507402 DNAJC5Q9H3Z4 198 aa22.91■■□□□ 1.26
ZCCHC9-208ENST00000507402 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.25
ZCCHC9-208ENST00000507402 NESP48681 1621 aa22.88■■□□□ 1.25
ZCCHC9-208ENST00000507402 CUX2O14529 1486 aa22.86■■□□□ 1.25
ZCCHC9-208ENST00000507402 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
ZCCHC9-208ENST00000507402 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
ZCCHC9-208ENST00000507402 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
ZCCHC9-208ENST00000507402 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
ZCCHC9-208ENST00000507402 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
ZCCHC9-208ENST00000507402 KIF21AQ7Z4S6 1674 aa22.58■■□□□ 1.21
ZCCHC9-208ENST00000507402 WIZO95785 1651 aa22.56■■□□□ 1.2
ZCCHC9-208ENST00000507402 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
ZCCHC9-208ENST00000507402 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
ZCCHC9-208ENST00000507402 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
ZCCHC9-208ENST00000507402 RSF1Q96T23 1441 aaPredicted RBP22.32■■□□□ 1.16
ZCCHC9-208ENST00000507402 WDR62O43379 1518 aa22.26■■□□□ 1.15
ZCCHC9-208ENST00000507402 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
ZCCHC9-208ENST00000507402 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
ZCCHC9-208ENST00000507402 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
ZCCHC9-208ENST00000507402 CFTRP13569 1480 aa22.16■■□□□ 1.14
ZCCHC9-208ENST00000507402 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
ZCCHC9-208ENST00000507402 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
ZCCHC9-208ENST00000507402 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
ZCCHC9-208ENST00000507402 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
ZCCHC9-208ENST00000507402 MSH5O43196 834 aa21.9■■□□□ 1.1
ZCCHC9-208ENST00000507402 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
ZCCHC9-208ENST00000507402 ZNF608Q9ULD9 1512 aaPredicted RBP21.81■■□□□ 1.08
ZCCHC9-208ENST00000507402 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
ZCCHC9-208ENST00000507402 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
ZCCHC9-208ENST00000507402 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
ZCCHC9-208ENST00000507402 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
ZCCHC9-208ENST00000507402 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
ZCCHC9-208ENST00000507402 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
ZCCHC9-208ENST00000507402 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
ZCCHC9-208ENST00000507402 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
ZCCHC9-208ENST00000507402 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.05
ZCCHC9-208ENST00000507402 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
ZCCHC9-208ENST00000507402 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
ZCCHC9-208ENST00000507402 PIAS4Q8N2W9 510 aaPredicted RBP21.57■■□□□ 1.04
ZCCHC9-208ENST00000507402 RAD54L2Q9Y4B4 1467 aa21.55■■□□□ 1.04
ZCCHC9-208ENST00000507402 CHD1O14646 1710 aa21.55■■□□□ 1.04
ZCCHC9-208ENST00000507402 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
ZCCHC9-208ENST00000507402 FBLN2P98095 1184 aa21.53■■□□□ 1.04
ZCCHC9-208ENST00000507402 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
ZCCHC9-208ENST00000507402 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
ZCCHC9-208ENST00000507402 SOGA1O94964 1423 aa21.47■■□□□ 1.03
ZCCHC9-208ENST00000507402 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
ZCCHC9-208ENST00000507402 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
ZCCHC9-208ENST00000507402 CUX1P39880 1505 aa21.42■■□□□ 1.02
ZCCHC9-208ENST00000507402 CYB5RLQ6IPT4 315 aa21.42■■□□□ 1.02
ZCCHC9-208ENST00000507402 SNAPC4Q5SXM2 1469 aa21.38■■□□□ 1.01
ZCCHC9-208ENST00000507402 ADRA2BP18089 450 aa21.35■■□□□ 1.01
ZCCHC9-208ENST00000507402 ARAP1Q96P48 1450 aa21.32■■□□□ 1
ZCCHC9-208ENST00000507402 WDR97A6NE52 1622 aa21.3■■□□□ 1
ZCCHC9-208ENST00000507402 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
ZCCHC9-208ENST00000507402 GRIN2BQ13224 1484 aa21.27■■□□□ 1
ZCCHC9-208ENST00000507402 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
ZCCHC9-208ENST00000507402 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
ZCCHC9-208ENST00000507402 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
ZCCHC9-208ENST00000507402 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
ZCCHC9-208ENST00000507402 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
ZCCHC9-208ENST00000507402 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
ZCCHC9-208ENST00000507402 GAPVD1Q14C86 1478 aa21.21■□□□□ 0.99
ZCCHC9-208ENST00000507402 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
ZCCHC9-208ENST00000507402 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
ZCCHC9-208ENST00000507402 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
ZCCHC9-208ENST00000507402 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
ZCCHC9-208ENST00000507402 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
ZCCHC9-208ENST00000507402 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
ZCCHC9-208ENST00000507402 GRIN2AQ12879 1464 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms