RNA–Protein interactions for RNA: ENST00000507240.1

CDK18-219, Transcript of cyclin dependent kinase 18, humanhuman

TSL 3

Gene CDK18, Length 351 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-219ENST00000507240 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
CDK18-219ENST00000507240 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
CDK18-219ENST00000507240 ABCC9O60706 1549 aa12.62□□□□□ -0.39
CDK18-219ENST00000507240 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
CDK18-219ENST00000507240 NACADO15069 1562 aa12.24□□□□□ -0.45
CDK18-219ENST00000507240 MYO15BQ96JP2 1530 aa12.19□□□□□ -0.46
CDK18-219ENST00000507240 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
CDK18-219ENST00000507240 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
CDK18-219ENST00000507240 UNC13AQ9UPW8 1703 aa12.07□□□□□ -0.48
CDK18-219ENST00000507240 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
CDK18-219ENST00000507240 BICRAQ9NZM4 1560 aa11.85□□□□□ -0.51
CDK18-219ENST00000507240 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
CDK18-219ENST00000507240 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
CDK18-219ENST00000507240 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDK18-219ENST00000507240 EIF4G1Q04637 1599 aaKnown RBP11.55□□□□□ -0.56
CDK18-219ENST00000507240 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
CDK18-219ENST00000507240 DNAJC5BQ9UF47 199 aa11.48□□□□□ -0.57
CDK18-219ENST00000507240 CECR2Q9BXF3 1484 aa11.38□□□□□ -0.59
CDK18-219ENST00000507240 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
CDK18-219ENST00000507240 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
CDK18-219ENST00000507240 SMARCA2P51531 1590 aa11.28□□□□□ -0.6
CDK18-219ENST00000507240 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.61
CDK18-219ENST00000507240 HMGXB3Q12766 1538 aa11.26□□□□□ -0.61
CDK18-219ENST00000507240 NCAPD3P42695 1498 aa11.23□□□□□ -0.61
CDK18-219ENST00000507240 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
CDK18-219ENST00000507240 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
CDK18-219ENST00000507240 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
CDK18-219ENST00000507240 WIZO95785 1651 aa11.09□□□□□ -0.63
CDK18-219ENST00000507240 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
CDK18-219ENST00000507240 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
CDK18-219ENST00000507240 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
CDK18-219ENST00000507240 PRDM2Q13029 1718 aa10.98□□□□□ -0.65
CDK18-219ENST00000507240 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
CDK18-219ENST00000507240 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
CDK18-219ENST00000507240 NESP48681 1621 aa10.91□□□□□ -0.66
CDK18-219ENST00000507240 THOC2Q8NI27 1593 aaKnown RBP10.9□□□□□ -0.67
CDK18-219ENST00000507240 CUX2O14529 1486 aa10.88□□□□□ -0.67
CDK18-219ENST00000507240 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
CDK18-219ENST00000507240 CADPSQ9ULU8 1353 aa10.85□□□□□ -0.67
CDK18-219ENST00000507240 CFTRP13569 1480 aa10.83□□□□□ -0.68
CDK18-219ENST00000507240 CCDC88BA6NC98 1476 aa10.78□□□□□ -0.68
CDK18-219ENST00000507240 CEP164Q9UPV0 1460 aa10.78□□□□□ -0.68
CDK18-219ENST00000507240 WDR62O43379 1518 aa10.78□□□□□ -0.68
CDK18-219ENST00000507240 MRC2Q9UBG0 1479 aa10.77□□□□□ -0.69
CDK18-219ENST00000507240 FANCD2Q9BXW9 1451 aa10.76□□□□□ -0.69
CDK18-219ENST00000507240 ABCC8Q09428 1581 aa10.65□□□□□ -0.71
CDK18-219ENST00000507240 URB2Q14146 1524 aaKnown RBP10.64□□□□□ -0.71
CDK18-219ENST00000507240 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
CDK18-219ENST00000507240 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
CDK18-219ENST00000507240 SUPT5HO00267 1087 aaKnown RBP10.56□□□□□ -0.72
CDK18-219ENST00000507240 WDR97A6NE52 1622 aa10.55□□□□□ -0.72
CDK18-219ENST00000507240 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
CDK18-219ENST00000507240 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
CDK18-219ENST00000507240 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.72
CDK18-219ENST00000507240 BIVM-ERCC5R4GMW8 1640 aa10.51□□□□□ -0.73
CDK18-219ENST00000507240 POLA1P09884 1462 aaPredicted RBP10.5□□□□□ -0.73
CDK18-219ENST00000507240 CUX1P39880 1505 aa10.49□□□□□ -0.73
CDK18-219ENST00000507240 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
CDK18-219ENST00000507240 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
CDK18-219ENST00000507240 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
CDK18-219ENST00000507240 ZNF608Q9ULD9 1512 aaPredicted RBP10.44□□□□□ -0.74
CDK18-219ENST00000507240 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
CDK18-219ENST00000507240 CHD1O14646 1710 aa10.43□□□□□ -0.74
CDK18-219ENST00000507240 SYNJ1O43426 1573 aa10.42□□□□□ -0.74
CDK18-219ENST00000507240 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
CDK18-219ENST00000507240 SOGA1O94964 1423 aa10.41□□□□□ -0.74
CDK18-219ENST00000507240 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.75
CDK18-219ENST00000507240 ABCA10Q8WWZ4 1543 aa10.39□□□□□ -0.75
CDK18-219ENST00000507240 RAD54L2Q9Y4B4 1467 aa10.38□□□□□ -0.75
CDK18-219ENST00000507240 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
CDK18-219ENST00000507240 AQRO60306 1485 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDK18-219ENST00000507240 GRIN2BQ13224 1484 aa10.34□□□□□ -0.75
CDK18-219ENST00000507240 GAPVD1Q14C86 1478 aa10.32□□□□□ -0.76
CDK18-219ENST00000507240 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
CDK18-219ENST00000507240 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
CDK18-219ENST00000507240 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
CDK18-219ENST00000507240 ADAMTS12P58397 1594 aa10.3□□□□□ -0.76
CDK18-219ENST00000507240 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
CDK18-219ENST00000507240 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
CDK18-219ENST00000507240 CUL7Q14999 1698 aa10.26□□□□□ -0.77
CDK18-219ENST00000507240 CLASP1Q7Z460 1538 aa10.26□□□□□ -0.77
CDK18-219ENST00000507240 RIMBP3CA6NJZ7 1639 aa10.25□□□□□ -0.77
CDK18-219ENST00000507240 RIMBP3BA6NNM3 1639 aa10.25□□□□□ -0.77
CDK18-219ENST00000507240 RIMBP3Q9UFD9 1639 aa10.25□□□□□ -0.77
CDK18-219ENST00000507240 ARHGEF11O15085 1522 aa10.23□□□□□ -0.77
CDK18-219ENST00000507240 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
CDK18-219ENST00000507240 FHAD1B1AJZ9 1412 aa10.2□□□□□ -0.78
CDK18-219ENST00000507240 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
CDK18-219ENST00000507240 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
CDK18-219ENST00000507240 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
CDK18-219ENST00000507240 CHMP7Q8WUX9 453 aaPredicted RBP10.18□□□□□ -0.78
CDK18-219ENST00000507240 FBLN2P98095 1184 aa10.17□□□□□ -0.78
CDK18-219ENST00000507240 RUSC2Q8N2Y8 1516 aa10.17□□□□□ -0.78
CDK18-219ENST00000507240 NUP160Q12769 1436 aa10.16□□□□□ -0.78
CDK18-219ENST00000507240 ARAP1Q96P48 1450 aa10.11□□□□□ -0.79
CDK18-219ENST00000507240 CTTNBP2Q8WZ74 1663 aa10.1□□□□□ -0.79
CDK18-219ENST00000507240 IGF1RP08069 1367 aa10.08□□□□□ -0.8
CDK18-219ENST00000507240 IQGAP2Q13576 1575 aa10.05□□□□□ -0.8
CDK18-219ENST00000507240 KIAA0586Q9BVV6 1533 aa10.05□□□□□ -0.8
CDK18-219ENST00000507240 CARMIL1Q5VZK9 1371 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms