RNA–Protein interactions for RNA: ENST00000506979.1

PLXND1-211, Transcript of plexin D1, humanhuman

TSL 5

Gene PLXND1, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-211ENST00000506979 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
PLXND1-211ENST00000506979 CCDC180Q9P1Z9 1646 aa18.51■□□□□ 0.55
PLXND1-211ENST00000506979 ABCC9O60706 1549 aa17.56■□□□□ 0.4
PLXND1-211ENST00000506979 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
PLXND1-211ENST00000506979 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
PLXND1-211ENST00000506979 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
PLXND1-211ENST00000506979 NACADO15069 1562 aa17.31■□□□□ 0.36
PLXND1-211ENST00000506979 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.36
PLXND1-211ENST00000506979 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
PLXND1-211ENST00000506979 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
PLXND1-211ENST00000506979 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
PLXND1-211ENST00000506979 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
PLXND1-211ENST00000506979 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
PLXND1-211ENST00000506979 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
PLXND1-211ENST00000506979 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
PLXND1-211ENST00000506979 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
PLXND1-211ENST00000506979 SMARCA4P51532 1647 aa16.12■□□□□ 0.17
PLXND1-211ENST00000506979 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
PLXND1-211ENST00000506979 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
PLXND1-211ENST00000506979 PEG3Q9GZU2 1588 aa16.02■□□□□ 0.16
PLXND1-211ENST00000506979 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
PLXND1-211ENST00000506979 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
PLXND1-211ENST00000506979 CC2D2AQ9P2K1 1620 aa15.98■□□□□ 0.15
PLXND1-211ENST00000506979 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
PLXND1-211ENST00000506979 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
PLXND1-211ENST00000506979 WIZO95785 1651 aa15.91■□□□□ 0.14
PLXND1-211ENST00000506979 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
PLXND1-211ENST00000506979 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
PLXND1-211ENST00000506979 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
PLXND1-211ENST00000506979 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
PLXND1-211ENST00000506979 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
PLXND1-211ENST00000506979 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
PLXND1-211ENST00000506979 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
PLXND1-211ENST00000506979 LAMC3Q9Y6N6 1575 aa15.47■□□□□ 0.07
PLXND1-211ENST00000506979 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
PLXND1-211ENST00000506979 CFTRP13569 1480 aa15.44■□□□□ 0.06
PLXND1-211ENST00000506979 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
PLXND1-211ENST00000506979 NESP48681 1621 aa15.28■□□□□ 0.04
PLXND1-211ENST00000506979 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
PLXND1-211ENST00000506979 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
PLXND1-211ENST00000506979 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
PLXND1-211ENST00000506979 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
PLXND1-211ENST00000506979 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
PLXND1-211ENST00000506979 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
PLXND1-211ENST00000506979 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
PLXND1-211ENST00000506979 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
PLXND1-211ENST00000506979 TOP2BQ02880 1626 aa15.07■□□□□ 0
PLXND1-211ENST00000506979 BIVM-ERCC5R4GMW8 1640 aa15.07■□□□□ 0
PLXND1-211ENST00000506979 TRIM41Q8WV44 630 aa15.06■□□□□ 0
PLXND1-211ENST00000506979 WDR62O43379 1518 aa15.04■□□□□ -0
PLXND1-211ENST00000506979 TOPBP1Q92547 1522 aa15.04■□□□□ -0
PLXND1-211ENST00000506979 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
PLXND1-211ENST00000506979 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
PLXND1-211ENST00000506979 CUX1P39880 1505 aa15.02□□□□□ -0.01
PLXND1-211ENST00000506979 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
PLXND1-211ENST00000506979 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
PLXND1-211ENST00000506979 CUX2O14529 1486 aa14.95□□□□□ -0.02
PLXND1-211ENST00000506979 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
PLXND1-211ENST00000506979 SOGA1O94964 1423 aa14.92□□□□□ -0.02
PLXND1-211ENST00000506979 POLA1P09884 1462 aaPredicted RBP14.91□□□□□ -0.02
PLXND1-211ENST00000506979 WDR97A6NE52 1622 aa14.9□□□□□ -0.02
PLXND1-211ENST00000506979 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
PLXND1-211ENST00000506979 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
PLXND1-211ENST00000506979 ABCA10Q8WWZ4 1543 aa14.86□□□□□ -0.03
PLXND1-211ENST00000506979 EEA1Q15075 1411 aa14.84□□□□□ -0.03
PLXND1-211ENST00000506979 KIF27Q86VH2 1401 aa14.82□□□□□ -0.04
PLXND1-211ENST00000506979 RAD54L2Q9Y4B4 1467 aa14.79□□□□□ -0.04
PLXND1-211ENST00000506979 GAPVD1Q14C86 1478 aa14.75□□□□□ -0.05
PLXND1-211ENST00000506979 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
PLXND1-211ENST00000506979 ERICH3Q5RHP9 1530 aa14.73□□□□□ -0.05
PLXND1-211ENST00000506979 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
PLXND1-211ENST00000506979 PBRM1Q86U86 1689 aa14.71□□□□□ -0.05
PLXND1-211ENST00000506979 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
PLXND1-211ENST00000506979 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
PLXND1-211ENST00000506979 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
PLXND1-211ENST00000506979 CUL7Q14999 1698 aa14.69□□□□□ -0.06
PLXND1-211ENST00000506979 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.069e-10■■■■□ 21
PLXND1-211ENST00000506979 ZNF608Q9ULD9 1512 aaPredicted RBP14.67□□□□□ -0.06
PLXND1-211ENST00000506979 IGF1RP08069 1367 aa14.67□□□□□ -0.06
PLXND1-211ENST00000506979 MAGI1Q96QZ7 1491 aaPredicted RBP14.65□□□□□ -0.06
PLXND1-211ENST00000506979 RUSC2Q8N2Y8 1516 aa14.63□□□□□ -0.07
PLXND1-211ENST00000506979 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
PLXND1-211ENST00000506979 KIF21BO75037 1637 aa14.59□□□□□ -0.07
PLXND1-211ENST00000506979 FHAD1B1AJZ9 1412 aa14.59□□□□□ -0.07
PLXND1-211ENST00000506979 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
PLXND1-211ENST00000506979 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
PLXND1-211ENST00000506979 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
PLXND1-211ENST00000506979 SYNJ2O15056 1496 aa14.57□□□□□ -0.08
PLXND1-211ENST00000506979 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
PLXND1-211ENST00000506979 ADAMTS12P58397 1594 aa14.55□□□□□ -0.08
PLXND1-211ENST00000506979 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
PLXND1-211ENST00000506979 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
PLXND1-211ENST00000506979 CHD1O14646 1710 aa14.49□□□□□ -0.09
PLXND1-211ENST00000506979 GRIN2AQ12879 1464 aa14.49□□□□□ -0.09
PLXND1-211ENST00000506979 CTTNBP2Q8WZ74 1663 aa14.47□□□□□ -0.09
PLXND1-211ENST00000506979 FBLN2P98095 1184 aa14.47□□□□□ -0.09
PLXND1-211ENST00000506979 UBTFP17480 764 aaKnown RBP14.46□□□□□ -0.09
PLXND1-211ENST00000506979 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
PLXND1-211ENST00000506979 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
PLXND1-211ENST00000506979 KIAA0586Q9BVV6 1533 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms