RNA–Protein interactions for RNA: ENST00000506828.1

ARHGEF38-204, Transcript of Rho guanine nucleotide exchange factor 38, humanhuman

TSL 5

Gene ARHGEF38, Length 492 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38-204ENST00000506828 NISCHQ9Y2I1 1504 aa15.65■□□□□ 0.1
ARHGEF38-204ENST00000506828 ABCC9O60706 1549 aa14.85□□□□□ -0.03
ARHGEF38-204ENST00000506828 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
ARHGEF38-204ENST00000506828 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
ARHGEF38-204ENST00000506828 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
ARHGEF38-204ENST00000506828 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
ARHGEF38-204ENST00000506828 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
ARHGEF38-204ENST00000506828 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
ARHGEF38-204ENST00000506828 PABPN1Q86U42 306 aaKnown RBP eCLIP13.72□□□□□ -0.21
ARHGEF38-204ENST00000506828 NACADO15069 1562 aa13.69□□□□□ -0.22
ARHGEF38-204ENST00000506828 UNC13AQ9UPW8 1703 aa13.59□□□□□ -0.23
ARHGEF38-204ENST00000506828 BICRAQ9NZM4 1560 aa13.55□□□□□ -0.24
ARHGEF38-204ENST00000506828 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
ARHGEF38-204ENST00000506828 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
ARHGEF38-204ENST00000506828 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
ARHGEF38-204ENST00000506828 MYO15BQ96JP2 1530 aa13.35□□□□□ -0.27
ARHGEF38-204ENST00000506828 SHROOM4Q9ULL8 1493 aa13.35□□□□□ -0.27
ARHGEF38-204ENST00000506828 EIF4G1Q04637 1599 aaKnown RBP13.25□□□□□ -0.29
ARHGEF38-204ENST00000506828 CUX2O14529 1486 aa13.11□□□□□ -0.31
ARHGEF38-204ENST00000506828 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
ARHGEF38-204ENST00000506828 SCRIBQ14160 1630 aa12.93□□□□□ -0.34
ARHGEF38-204ENST00000506828 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
ARHGEF38-204ENST00000506828 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
ARHGEF38-204ENST00000506828 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
ARHGEF38-204ENST00000506828 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
ARHGEF38-204ENST00000506828 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
ARHGEF38-204ENST00000506828 NESP48681 1621 aa12.59□□□□□ -0.39
ARHGEF38-204ENST00000506828 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
ARHGEF38-204ENST00000506828 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
ARHGEF38-204ENST00000506828 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
ARHGEF38-204ENST00000506828 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
ARHGEF38-204ENST00000506828 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
ARHGEF38-204ENST00000506828 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
ARHGEF38-204ENST00000506828 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF38-204ENST00000506828 PDS5BQ9NTI5 1447 aa12.39□□□□□ -0.43
ARHGEF38-204ENST00000506828 SMARCA4P51532 1647 aa12.33□□□□□ -0.44
ARHGEF38-204ENST00000506828 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
ARHGEF38-204ENST00000506828 WDR62O43379 1518 aa12.32□□□□□ -0.44
ARHGEF38-204ENST00000506828 MRC2Q9UBG0 1479 aa12.31□□□□□ -0.44
ARHGEF38-204ENST00000506828 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
ARHGEF38-204ENST00000506828 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
ARHGEF38-204ENST00000506828 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
ARHGEF38-204ENST00000506828 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
ARHGEF38-204ENST00000506828 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
ARHGEF38-204ENST00000506828 ARHGEF11O15085 1522 aa12.19□□□□□ -0.46
ARHGEF38-204ENST00000506828 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF38-204ENST00000506828 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF38-204ENST00000506828 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
ARHGEF38-204ENST00000506828 CYB5RLQ6IPT4 315 aa12.11□□□□□ -0.47
ARHGEF38-204ENST00000506828 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
ARHGEF38-204ENST00000506828 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
ARHGEF38-204ENST00000506828 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
ARHGEF38-204ENST00000506828 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
ARHGEF38-204ENST00000506828 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF38-204ENST00000506828 CFTRP13569 1480 aa11.96□□□□□ -0.49
ARHGEF38-204ENST00000506828 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF38-204ENST00000506828 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF38-204ENST00000506828 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
ARHGEF38-204ENST00000506828 CHD1O14646 1710 aa11.86□□□□□ -0.51
ARHGEF38-204ENST00000506828 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF38-204ENST00000506828 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
ARHGEF38-204ENST00000506828 WIZO95785 1651 aa11.84□□□□□ -0.51
ARHGEF38-204ENST00000506828 PRDM2Q13029 1718 aa11.77□□□□□ -0.52
ARHGEF38-204ENST00000506828 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
ARHGEF38-204ENST00000506828 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
ARHGEF38-204ENST00000506828 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
ARHGEF38-204ENST00000506828 FBLN2P98095 1184 aa11.75□□□□□ -0.53
ARHGEF38-204ENST00000506828 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
ARHGEF38-204ENST00000506828 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
ARHGEF38-204ENST00000506828 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
ARHGEF38-204ENST00000506828 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
ARHGEF38-204ENST00000506828 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
ARHGEF38-204ENST00000506828 GAPVD1Q14C86 1478 aa11.66□□□□□ -0.54
ARHGEF38-204ENST00000506828 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF38-204ENST00000506828 POLA1P09884 1462 aaPredicted RBP11.61□□□□□ -0.55
ARHGEF38-204ENST00000506828 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
ARHGEF38-204ENST00000506828 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
ARHGEF38-204ENST00000506828 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
ARHGEF38-204ENST00000506828 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF38-204ENST00000506828 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
ARHGEF38-204ENST00000506828 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
ARHGEF38-204ENST00000506828 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
ARHGEF38-204ENST00000506828 RAD54L2Q9Y4B4 1467 aa11.56□□□□□ -0.56
ARHGEF38-204ENST00000506828 SOGA1O94964 1423 aa11.54□□□□□ -0.56
ARHGEF38-204ENST00000506828 CCDC88BA6NC98 1476 aa11.54□□□□□ -0.56
ARHGEF38-204ENST00000506828 GRIN2BQ13224 1484 aa11.52□□□□□ -0.56
ARHGEF38-204ENST00000506828 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
ARHGEF38-204ENST00000506828 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
ARHGEF38-204ENST00000506828 ABCC10Q5T3U5 1492 aa11.44□□□□□ -0.58
ARHGEF38-204ENST00000506828 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
ARHGEF38-204ENST00000506828 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
ARHGEF38-204ENST00000506828 KDM6BO15054 1643 aa11.42□□□□□ -0.58
ARHGEF38-204ENST00000506828 FAM69CQ0P6D2 419 aa11.42□□□□□ -0.58
ARHGEF38-204ENST00000506828 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
ARHGEF38-204ENST00000506828 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
ARHGEF38-204ENST00000506828 FBXO41Q8TF61 875 aa11.4□□□□□ -0.58
ARHGEF38-204ENST00000506828 HECW2Q9P2P5 1572 aa11.39□□□□□ -0.59
ARHGEF38-204ENST00000506828 DIP2BQ9P265 1576 aa11.38□□□□□ -0.59
ARHGEF38-204ENST00000506828 MAPKBP1O60336 1514 aa11.38□□□□□ -0.59
ARHGEF38-204ENST00000506828 NUP160Q12769 1436 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms