RNA–Protein interactions for RNA: ENST00000506778.1

GFM2-205, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 4

Gene GFM2, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-205ENST00000506778 NISCHQ9Y2I1 1504 aa34.72■■■■□ 3.15
GFM2-205ENST00000506778 CCDC180Q9P1Z9 1646 aa30.88■■■□□ 2.53
GFM2-205ENST00000506778 ABCC9O60706 1549 aa30.07■■■□□ 2.4
GFM2-205ENST00000506778 RB1CC1Q8TDY2 1594 aa28.98■■■□□ 2.23
GFM2-205ENST00000506778 NACADO15069 1562 aa28.97■■■□□ 2.23
GFM2-205ENST00000506778 ZCCHC6Q5VYS8 1495 aaKnown RBP28.97■■■□□ 2.23
GFM2-205ENST00000506778 MYO15BQ96JP2 1530 aa28.84■■■□□ 2.21
GFM2-205ENST00000506778 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
GFM2-205ENST00000506778 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
GFM2-205ENST00000506778 UNC13AQ9UPW8 1703 aa28.42■■■□□ 2.14
GFM2-205ENST00000506778 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
GFM2-205ENST00000506778 SCRIBQ14160 1630 aa28.14■■■□□ 2.1
GFM2-205ENST00000506778 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
GFM2-205ENST00000506778 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
GFM2-205ENST00000506778 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
GFM2-205ENST00000506778 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
GFM2-205ENST00000506778 CC2D2AQ9P2K1 1620 aa27.24■■□□□ 1.95
GFM2-205ENST00000506778 CECR2Q9BXF3 1484 aa27.05■■□□□ 1.92
GFM2-205ENST00000506778 SMARCA4P51532 1647 aa26.95■■□□□ 1.91
GFM2-205ENST00000506778 BAZ1AQ9NRL2 1556 aaPredicted RBP26.9■■□□□ 1.9
GFM2-205ENST00000506778 MROH2BQ7Z745 1585 aa26.77■■□□□ 1.88
GFM2-205ENST00000506778 ATAD2BQ9ULI0 1458 aa26.75■■□□□ 1.87
GFM2-205ENST00000506778 NCAPD3P42695 1498 aa26.73■■□□□ 1.87
GFM2-205ENST00000506778 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
GFM2-205ENST00000506778 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
GFM2-205ENST00000506778 HMGXB3Q12766 1538 aa26.63■■□□□ 1.85
GFM2-205ENST00000506778 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
GFM2-205ENST00000506778 WIZO95785 1651 aa26.5■■□□□ 1.83
GFM2-205ENST00000506778 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
GFM2-205ENST00000506778 TOP2AP11388 1531 aaKnown RBP26.21■■□□□ 1.79
GFM2-205ENST00000506778 NESP48681 1621 aa26.07■■□□□ 1.76
GFM2-205ENST00000506778 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
GFM2-205ENST00000506778 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
GFM2-205ENST00000506778 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
GFM2-205ENST00000506778 ERCC6Q03468 1493 aa25.86■■□□□ 1.73
GFM2-205ENST00000506778 CFTRP13569 1480 aa25.82■■□□□ 1.72
GFM2-205ENST00000506778 KIF21AQ7Z4S6 1674 aa25.81■■□□□ 1.72
GFM2-205ENST00000506778 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
GFM2-205ENST00000506778 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
GFM2-205ENST00000506778 AEBP2Q6ZN18 517 aaPredicted RBP25.73■■□□□ 1.71
GFM2-205ENST00000506778 THOC2Q8NI27 1593 aaKnown RBP25.71■■□□□ 1.71
GFM2-205ENST00000506778 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
GFM2-205ENST00000506778 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
GFM2-205ENST00000506778 CUX2O14529 1486 aa25.62■■□□□ 1.69
GFM2-205ENST00000506778 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
GFM2-205ENST00000506778 MRC2Q9UBG0 1479 aa25.55■■□□□ 1.68
GFM2-205ENST00000506778 WDR62O43379 1518 aa25.51■■□□□ 1.67
GFM2-205ENST00000506778 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
GFM2-205ENST00000506778 TOPBP1Q92547 1522 aa25.26■■□□□ 1.63
GFM2-205ENST00000506778 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
GFM2-205ENST00000506778 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
GFM2-205ENST00000506778 CUX1P39880 1505 aa25.12■■□□□ 1.61
GFM2-205ENST00000506778 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
GFM2-205ENST00000506778 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
GFM2-205ENST00000506778 IFT140Q96RY7 1462 aa25.05■■□□□ 1.6
GFM2-205ENST00000506778 TARBP1Q13395 1621 aaKnown RBP25.02■■□□□ 1.6
GFM2-205ENST00000506778 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
GFM2-205ENST00000506778 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
GFM2-205ENST00000506778 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
GFM2-205ENST00000506778 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
GFM2-205ENST00000506778 RAD54L2Q9Y4B4 1467 aa24.93■■□□□ 1.58
GFM2-205ENST00000506778 WRNQ14191 1432 aaPredicted RBP eCLIP24.93■■□□□ 1.58
GFM2-205ENST00000506778 TOP2BQ02880 1626 aa24.92■■□□□ 1.58
GFM2-205ENST00000506778 SOGA1O94964 1423 aa24.9■■□□□ 1.58
GFM2-205ENST00000506778 EIF4G3O43432 1585 aaKnown RBP24.89■■□□□ 1.58
GFM2-205ENST00000506778 WDR97A6NE52 1622 aa24.87■■□□□ 1.57
GFM2-205ENST00000506778 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
GFM2-205ENST00000506778 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
GFM2-205ENST00000506778 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
GFM2-205ENST00000506778 DNAJC5Q9H3Z4 198 aa24.7■■□□□ 1.54
GFM2-205ENST00000506778 ABCA5Q8WWZ7 1642 aa24.7■■□□□ 1.54
GFM2-205ENST00000506778 PBRM1Q86U86 1689 aa24.65■■□□□ 1.54
GFM2-205ENST00000506778 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
GFM2-205ENST00000506778 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
GFM2-205ENST00000506778 SNAPC4Q5SXM2 1469 aa24.59■■□□□ 1.53
GFM2-205ENST00000506778 CHD1O14646 1710 aa24.58■■□□□ 1.53
GFM2-205ENST00000506778 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
GFM2-205ENST00000506778 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
GFM2-205ENST00000506778 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
GFM2-205ENST00000506778 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
GFM2-205ENST00000506778 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
GFM2-205ENST00000506778 FBLN2P98095 1184 aa24.39■■□□□ 1.49
GFM2-205ENST00000506778 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
GFM2-205ENST00000506778 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
GFM2-205ENST00000506778 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
GFM2-205ENST00000506778 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
GFM2-205ENST00000506778 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
GFM2-205ENST00000506778 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
GFM2-205ENST00000506778 IGF1RP08069 1367 aa24.29■■□□□ 1.48
GFM2-205ENST00000506778 CUL7Q14999 1698 aa24.27■■□□□ 1.48
GFM2-205ENST00000506778 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
GFM2-205ENST00000506778 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
GFM2-205ENST00000506778 NUP160Q12769 1436 aa24.22■■□□□ 1.47
GFM2-205ENST00000506778 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
GFM2-205ENST00000506778 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
GFM2-205ENST00000506778 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
GFM2-205ENST00000506778 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
GFM2-205ENST00000506778 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
GFM2-205ENST00000506778 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
GFM2-205ENST00000506778 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms