RNA–Protein interactions for RNA: ENST00000506774.1

JRK-202, Transcript of Jrk helix-turn-helix protein, humanhuman

TSL 3

Gene JRK, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JRK-202ENST00000506774 NISCHQ9Y2I1 1504 aa19.8■□□□□ 0.76
JRK-202ENST00000506774 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
JRK-202ENST00000506774 ABCC9O60706 1549 aa17.53■□□□□ 0.4
JRK-202ENST00000506774 DCAF8L2P0C7V8 631 aa16.81■□□□□ 0.28
JRK-202ENST00000506774 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
JRK-202ENST00000506774 NACADO15069 1562 aa16.7■□□□□ 0.26
JRK-202ENST00000506774 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
JRK-202ENST00000506774 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
JRK-202ENST00000506774 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
JRK-202ENST00000506774 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
JRK-202ENST00000506774 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
JRK-202ENST00000506774 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
JRK-202ENST00000506774 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
JRK-202ENST00000506774 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
JRK-202ENST00000506774 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
JRK-202ENST00000506774 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
JRK-202ENST00000506774 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
JRK-202ENST00000506774 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
JRK-202ENST00000506774 CECR2Q9BXF3 1484 aa15.79■□□□□ 0.12
JRK-202ENST00000506774 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
JRK-202ENST00000506774 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
JRK-202ENST00000506774 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
JRK-202ENST00000506774 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
JRK-202ENST00000506774 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
JRK-202ENST00000506774 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
JRK-202ENST00000506774 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
JRK-202ENST00000506774 BAZ1BQ9UIG0 1483 aaKnown RBP15.29■□□□□ 0.04
JRK-202ENST00000506774 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
JRK-202ENST00000506774 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
JRK-202ENST00000506774 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
JRK-202ENST00000506774 NESP48681 1621 aa15.06■□□□□ 0
JRK-202ENST00000506774 CUX2O14529 1486 aa15.05■□□□□ -0
JRK-202ENST00000506774 WIZO95785 1651 aa15.05■□□□□ -0
JRK-202ENST00000506774 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
JRK-202ENST00000506774 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
JRK-202ENST00000506774 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
JRK-202ENST00000506774 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
JRK-202ENST00000506774 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
JRK-202ENST00000506774 KIF21AQ7Z4S6 1674 aa14.86□□□□□ -0.03
JRK-202ENST00000506774 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
JRK-202ENST00000506774 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
JRK-202ENST00000506774 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
JRK-202ENST00000506774 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
JRK-202ENST00000506774 CFTRP13569 1480 aa14.81□□□□□ -0.04
JRK-202ENST00000506774 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
JRK-202ENST00000506774 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
JRK-202ENST00000506774 WDR62O43379 1518 aa14.73□□□□□ -0.05
JRK-202ENST00000506774 SUPT5HO00267 1087 aaKnown RBP14.63□□□□□ -0.07
JRK-202ENST00000506774 PRDM2Q13029 1718 aa14.62□□□□□ -0.07
JRK-202ENST00000506774 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
JRK-202ENST00000506774 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
JRK-202ENST00000506774 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
JRK-202ENST00000506774 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
JRK-202ENST00000506774 DNMBPQ6XZF7 1577 aa14.49□□□□□ -0.09
JRK-202ENST00000506774 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
JRK-202ENST00000506774 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
JRK-202ENST00000506774 SOGA1O94964 1423 aa14.38□□□□□ -0.11
JRK-202ENST00000506774 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
JRK-202ENST00000506774 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
JRK-202ENST00000506774 FBLN2P98095 1184 aa14.34□□□□□ -0.11
JRK-202ENST00000506774 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
JRK-202ENST00000506774 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
JRK-202ENST00000506774 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
JRK-202ENST00000506774 RAD54L2Q9Y4B4 1467 aa14.32□□□□□ -0.12
JRK-202ENST00000506774 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
JRK-202ENST00000506774 CUX1P39880 1505 aa14.31□□□□□ -0.12
JRK-202ENST00000506774 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
JRK-202ENST00000506774 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
JRK-202ENST00000506774 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
JRK-202ENST00000506774 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
JRK-202ENST00000506774 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
JRK-202ENST00000506774 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
JRK-202ENST00000506774 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
JRK-202ENST00000506774 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
JRK-202ENST00000506774 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
JRK-202ENST00000506774 CHD1O14646 1710 aa14.18□□□□□ -0.14
JRK-202ENST00000506774 ABCA10Q8WWZ4 1543 aa14.17□□□□□ -0.14
JRK-202ENST00000506774 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
JRK-202ENST00000506774 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
JRK-202ENST00000506774 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
JRK-202ENST00000506774 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
JRK-202ENST00000506774 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
JRK-202ENST00000506774 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
JRK-202ENST00000506774 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
JRK-202ENST00000506774 BIVM-ERCC5R4GMW8 1640 aa14.12□□□□□ -0.15
JRK-202ENST00000506774 CYB5RLQ6IPT4 315 aa14.11□□□□□ -0.15
JRK-202ENST00000506774 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
JRK-202ENST00000506774 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
JRK-202ENST00000506774 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
JRK-202ENST00000506774 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
JRK-202ENST00000506774 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
JRK-202ENST00000506774 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
JRK-202ENST00000506774 ADAMTS12P58397 1594 aa14□□□□□ -0.17
JRK-202ENST00000506774 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
JRK-202ENST00000506774 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
JRK-202ENST00000506774 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
JRK-202ENST00000506774 NUP160Q12769 1436 aa13.93□□□□□ -0.18
JRK-202ENST00000506774 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
JRK-202ENST00000506774 CEP170Q5SW79 1584 aa13.9□□□□□ -0.18
JRK-202ENST00000506774 IGF1RP08069 1367 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms