RNA–Protein interactions for RNA: ENST00000506582.5

ACSF2-211, Transcript of acyl-CoA synthetase family member 2, human

TSL 5

Gene ACSF2, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-211	ENST00000506582	NISCH	Q9Y2I1	1504 aa		43.38	■■■■■ 4.53
ACSF2-211	ENST00000506582	ABCC9	O60706	1549 aa		39.4	■■■■□ 3.9
ACSF2-211	ENST00000506582	CCDC180	Q9P1Z9	1646 aa		38.71	■■■■□ 3.79
ACSF2-211	ENST00000506582	DNAJC5B	Q9UF47	199 aa		37.6	■■■■□ 3.61
ACSF2-211	ENST00000506582	RB1CC1	Q8TDY2	1594 aa		37.21	■■■■□ 3.55
ACSF2-211	ENST00000506582	NACAD	O15069	1562 aa		36.74	■■■■□ 3.47
ACSF2-211	ENST00000506582	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.53	■■■■□ 3.44
ACSF2-211	ENST00000506582	UNC13A	Q9UPW8	1703 aa		36.42	■■■■□ 3.42
ACSF2-211	ENST00000506582	DCAF8L2	P0C7V8	631 aa		36.36	■■■■□ 3.41
ACSF2-211	ENST00000506582	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.28	■■■■□ 3.4
ACSF2-211	ENST00000506582	BICRA	Q9NZM4	1560 aa		36.11	■■■■□ 3.37
ACSF2-211	ENST00000506582	DCAF1	Q9Y4B6	1507 aa		36.02	■■■■□ 3.36
ACSF2-211	ENST00000506582	MYO15B	Q96JP2	1530 aa		36.01	■■■■□ 3.36
ACSF2-211	ENST00000506582	CC2D2A	Q9P2K1	1620 aa		35.59	■■■■□ 3.29
ACSF2-211	ENST00000506582	CECR2	Q9BXF3	1484 aa		35.58	■■■■□ 3.29
ACSF2-211	ENST00000506582	SHROOM4	Q9ULL8	1493 aa		35.56	■■■■□ 3.28
ACSF2-211	ENST00000506582	EIF4G1	Q04637	1599 aa	Known RBP	35.31	■■■■□ 3.24
ACSF2-211	ENST00000506582	SCRIB	Q14160	1630 aa		35.19	■■■■□ 3.22
ACSF2-211	ENST00000506582	DNAJC5	Q9H3Z4	198 aa		35.13	■■■■□ 3.21
ACSF2-211	ENST00000506582	CUX2	O14529	1486 aa		34.3	■■■■□ 3.08
ACSF2-211	ENST00000506582	ERCC6	Q03468	1493 aa		34.11	■■■■□ 3.05
ACSF2-211	ENST00000506582	NCAPD3	P42695	1498 aa		33.89	■■■■□ 3.02
ACSF2-211	ENST00000506582	ATAD2B	Q9ULI0	1458 aa		33.68	■■■□□ 2.98
ACSF2-211	ENST00000506582	NES	P48681	1621 aa		33.62	■■■□□ 2.97
ACSF2-211	ENST00000506582	HMGXB3	Q12766	1538 aa		33.6	■■■□□ 2.97
ACSF2-211	ENST00000506582	SMARCA2	P51531	1590 aa		33.59	■■■□□ 2.97
ACSF2-211	ENST00000506582	SMARCA4	P51532	1647 aa		33.56	■■■□□ 2.96
ACSF2-211	ENST00000506582	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	33.55	■■■□□ 2.96
ACSF2-211	ENST00000506582	THOC2	Q8NI27	1593 aa	Known RBP	33.47	■■■□□ 2.95
ACSF2-211	ENST00000506582	MROH2B	Q7Z745	1585 aa		33.42	■■■□□ 2.94
ACSF2-211	ENST00000506582	BAZ1B	Q9UIG0	1483 aa	Known RBP	33.34	■■■□□ 2.93
ACSF2-211	ENST00000506582	PEG3	Q9GZU2	1588 aa		33.33	■■■□□ 2.93
ACSF2-211	ENST00000506582	LAMC3	Q9Y6N6	1575 aa		33.3	■■■□□ 2.92
ACSF2-211	ENST00000506582	TRIM41	Q8WV44	630 aa		33.3	■■■□□ 2.92
ACSF2-211	ENST00000506582	KIF21A	Q7Z4S6	1674 aa		33.24	■■■□□ 2.91
ACSF2-211	ENST00000506582	RSF1	Q96T23	1441 aa	Predicted RBP	33.2	■■■□□ 2.91
ACSF2-211	ENST00000506582	PDS5B	Q9NTI5	1447 aa		33.11	■■■□□ 2.89
ACSF2-211	ENST00000506582	WIZ	O95785	1651 aa		33.07	■■■□□ 2.88
ACSF2-211	ENST00000506582	MRC2	Q9UBG0	1479 aa		32.87	■■■□□ 2.85
ACSF2-211	ENST00000506582	WDR62	O43379	1518 aa		32.82	■■■□□ 2.85
ACSF2-211	ENST00000506582	CADPS	Q9ULU8	1353 aa		32.82	■■■□□ 2.84
ACSF2-211	ENST00000506582	TOP2A	P11388	1531 aa	Known RBP	32.77	■■■□□ 2.84
ACSF2-211	ENST00000506582	CEP164	Q9UPV0	1460 aa		32.6	■■■□□ 2.81
ACSF2-211	ENST00000506582	OSCAR	Q8IYS5	282 aa		32.58	■■■□□ 2.81
ACSF2-211	ENST00000506582	FANCD2	Q9BXW9	1451 aa		32.47	■■■□□ 2.79
ACSF2-211	ENST00000506582	SUPT5H	O00267	1087 aa	Known RBP	32.44	■■■□□ 2.78
ACSF2-211	ENST00000506582	CCDC88B	A6NC98	1476 aa		32.35	■■■□□ 2.77
ACSF2-211	ENST00000506582	RIMBP3C	A6NJZ7	1639 aa		32.29	■■■□□ 2.76
ACSF2-211	ENST00000506582	RIMBP3B	A6NNM3	1639 aa		32.29	■■■□□ 2.76
ACSF2-211	ENST00000506582	RIMBP3	Q9UFD9	1639 aa		32.29	■■■□□ 2.76
ACSF2-211	ENST00000506582	CFTR	P13569	1480 aa		32.29	■■■□□ 2.76
ACSF2-211	ENST00000506582	URB2	Q14146	1524 aa	Known RBP	32.25	■■■□□ 2.75
ACSF2-211	ENST00000506582	ARHGEF11	O15085	1522 aa		32.09	■■■□□ 2.73
ACSF2-211	ENST00000506582	PRDM2	Q13029	1718 aa		32.04	■■■□□ 2.72
ACSF2-211	ENST00000506582	ZNF608	Q9ULD9	1512 aa	Predicted RBP	31.97	■■■□□ 2.71
ACSF2-211	ENST00000506582	IFT140	Q96RY7	1462 aa		31.96	■■■□□ 2.71
ACSF2-211	ENST00000506582	CYB5RL	Q6IPT4	315 aa		31.87	■■■□□ 2.69
ACSF2-211	ENST00000506582	EIF4G3	O43432	1585 aa	Known RBP	31.81	■■■□□ 2.68
ACSF2-211	ENST00000506582	TRH	P20396	242 aa	Predicted RBP	31.8	■■■□□ 2.68
ACSF2-211	ENST00000506582	TOPBP1	Q92547	1522 aa		31.77	■■■□□ 2.68
ACSF2-211	ENST00000506582	CHD1	O14646	1710 aa		31.77	■■■□□ 2.68
ACSF2-211	ENST00000506582	ARAP1	Q96P48	1450 aa		31.7	■■■□□ 2.66
ACSF2-211	ENST00000506582	ABCC8	Q09428	1581 aa		31.67	■■■□□ 2.66
ACSF2-211	ENST00000506582	DNMBP	Q6XZF7	1577 aa		31.6	■■■□□ 2.65
ACSF2-211	ENST00000506582	AQR	O60306	1485 aa	Known RBP eCLIP	31.59	■■■□□ 2.65	4e-13	■■■■□ 23
ACSF2-211	ENST00000506582	TARBP1	Q13395	1621 aa	Known RBP	31.57	■■■□□ 2.64
ACSF2-211	ENST00000506582	FBLN2	P98095	1184 aa		31.56	■■■□□ 2.64
ACSF2-211	ENST00000506582	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.48	■■■□□ 2.63
ACSF2-211	ENST00000506582	POLA1	P09884	1462 aa	Predicted RBP	31.39	■■■□□ 2.62
ACSF2-211	ENST00000506582	CUX1	P39880	1505 aa		31.33	■■■□□ 2.61
ACSF2-211	ENST00000506582	CLASP1	Q7Z460	1538 aa		31.31	■■■□□ 2.6
ACSF2-211	ENST00000506582	RAD54L2	Q9Y4B4	1467 aa		31.28	■■■□□ 2.6
ACSF2-211	ENST00000506582	TDRD9	Q8NDG6	1382 aa	Known RBP	31.26	■■■□□ 2.59
ACSF2-211	ENST00000506582	SNAPC4	Q5SXM2	1469 aa		31.26	■■■□□ 2.59
ACSF2-211	ENST00000506582	SYNJ1	O43426	1573 aa		31.26	■■■□□ 2.59
ACSF2-211	ENST00000506582	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.24	■■■□□ 2.59
ACSF2-211	ENST00000506582	BIVM-ERCC5	R4GMW8	1640 aa		31.23	■■■□□ 2.59
ACSF2-211	ENST00000506582	SOGA1	O94964	1423 aa		31.23	■■■□□ 2.59
ACSF2-211	ENST00000506582	WDR97	A6NE52	1622 aa		31.21	■■■□□ 2.59
ACSF2-211	ENST00000506582	TOP2B	Q02880	1626 aa		31.2	■■■□□ 2.59
ACSF2-211	ENST00000506582	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.19	■■■□□ 2.58
ACSF2-211	ENST00000506582	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.15	■■■□□ 2.58
ACSF2-211	ENST00000506582	FGD5	Q6ZNL6	1462 aa		31.09	■■■□□ 2.57
ACSF2-211	ENST00000506582	SYNJ2	O15056	1496 aa		31.06	■■■□□ 2.56
ACSF2-211	ENST00000506582	GRIN2B	Q13224	1484 aa		31.06	■■■□□ 2.56
ACSF2-211	ENST00000506582	GAPVD1	Q14C86	1478 aa		31.03	■■■□□ 2.56
ACSF2-211	ENST00000506582	PBRM1	Q86U86	1689 aa		30.97	■■■□□ 2.55
ACSF2-211	ENST00000506582	ABCA10	Q8WWZ4	1543 aa		30.88	■■■□□ 2.53
ACSF2-211	ENST00000506582	ERCC6L2	Q5T890	1561 aa		30.76	■■■□□ 2.52
ACSF2-211	ENST00000506582	ABCA5	Q8WWZ7	1642 aa		30.76	■■■□□ 2.51
ACSF2-211	ENST00000506582	CHIC1	Q5VXU3	224 aa		30.71	■■■□□ 2.51
ACSF2-211	ENST00000506582	CEP170	Q5SW79	1584 aa		30.66	■■■□□ 2.5
ACSF2-211	ENST00000506582	GRIN2A	Q12879	1464 aa		30.66	■■■□□ 2.5
ACSF2-211	ENST00000506582	KIF13A	Q9H1H9	1805 aa		30.66	■■■□□ 2.5
ACSF2-211	ENST00000506582	NUP160	Q12769	1436 aa		30.57	■■■□□ 2.48
ACSF2-211	ENST00000506582	SHROOM2	Q13796	1616 aa		30.57	■■■□□ 2.48
ACSF2-211	ENST00000506582	ADAMTS12	P58397	1594 aa		30.57	■■■□□ 2.48
ACSF2-211	ENST00000506582	KIF27	Q86VH2	1401 aa		30.52	■■■□□ 2.48
ACSF2-211	ENST00000506582	ERICH3	Q5RHP9	1530 aa		30.52	■■■□□ 2.48
ACSF2-211	ENST00000506582	RUSC2	Q8N2Y8	1516 aa		30.43	■■■□□ 2.46

Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms