RNA–Protein interactions for RNA: ENST00000506252.1

SREK1IP1-202, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-202ENST00000506252 NISCHQ9Y2I1 1504 aa27.6■■■□□ 2.01
SREK1IP1-202ENST00000506252 ABCC9O60706 1549 aa25.78■■□□□ 1.72
SREK1IP1-202ENST00000506252 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
SREK1IP1-202ENST00000506252 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
SREK1IP1-202ENST00000506252 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.47
SREK1IP1-202ENST00000506252 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
SREK1IP1-202ENST00000506252 NACADO15069 1562 aa23.85■■□□□ 1.41
SREK1IP1-202ENST00000506252 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
SREK1IP1-202ENST00000506252 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
SREK1IP1-202ENST00000506252 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
SREK1IP1-202ENST00000506252 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
SREK1IP1-202ENST00000506252 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
SREK1IP1-202ENST00000506252 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
SREK1IP1-202ENST00000506252 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
SREK1IP1-202ENST00000506252 DNAJC5Q9H3Z4 198 aa23.2■■□□□ 1.3
SREK1IP1-202ENST00000506252 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
SREK1IP1-202ENST00000506252 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SREK1IP1-202ENST00000506252 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
SREK1IP1-202ENST00000506252 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
SREK1IP1-202ENST00000506252 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
SREK1IP1-202ENST00000506252 CUX2O14529 1486 aa22.42■■□□□ 1.18
SREK1IP1-202ENST00000506252 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
SREK1IP1-202ENST00000506252 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
SREK1IP1-202ENST00000506252 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
SREK1IP1-202ENST00000506252 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
SREK1IP1-202ENST00000506252 NESP48681 1621 aa21.96■■□□□ 1.11
SREK1IP1-202ENST00000506252 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
SREK1IP1-202ENST00000506252 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
SREK1IP1-202ENST00000506252 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
SREK1IP1-202ENST00000506252 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
SREK1IP1-202ENST00000506252 SMARCA4P51532 1647 aa21.72■■□□□ 1.07
SREK1IP1-202ENST00000506252 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
SREK1IP1-202ENST00000506252 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
SREK1IP1-202ENST00000506252 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
SREK1IP1-202ENST00000506252 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
SREK1IP1-202ENST00000506252 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
SREK1IP1-202ENST00000506252 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
SREK1IP1-202ENST00000506252 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
SREK1IP1-202ENST00000506252 WDR62O43379 1518 aa21.37■■□□□ 1.01
SREK1IP1-202ENST00000506252 OSCARQ8IYS5 282 aa21.32■■□□□ 1
SREK1IP1-202ENST00000506252 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
SREK1IP1-202ENST00000506252 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
SREK1IP1-202ENST00000506252 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
SREK1IP1-202ENST00000506252 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
SREK1IP1-202ENST00000506252 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
SREK1IP1-202ENST00000506252 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
SREK1IP1-202ENST00000506252 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
SREK1IP1-202ENST00000506252 WIZO95785 1651 aa21.06■□□□□ 0.96
SREK1IP1-202ENST00000506252 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
SREK1IP1-202ENST00000506252 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
SREK1IP1-202ENST00000506252 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
SREK1IP1-202ENST00000506252 CFTRP13569 1480 aa20.92■□□□□ 0.94
SREK1IP1-202ENST00000506252 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
SREK1IP1-202ENST00000506252 ZNF608Q9ULD9 1512 aaPredicted RBP20.84■□□□□ 0.93
SREK1IP1-202ENST00000506252 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
SREK1IP1-202ENST00000506252 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
SREK1IP1-202ENST00000506252 CHD1O14646 1710 aa20.77■□□□□ 0.92
SREK1IP1-202ENST00000506252 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
SREK1IP1-202ENST00000506252 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
SREK1IP1-202ENST00000506252 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
SREK1IP1-202ENST00000506252 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
SREK1IP1-202ENST00000506252 FBLN2P98095 1184 aa20.61■□□□□ 0.89
SREK1IP1-202ENST00000506252 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
SREK1IP1-202ENST00000506252 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
SREK1IP1-202ENST00000506252 TARBP1Q13395 1621 aaKnown RBP20.52■□□□□ 0.88
SREK1IP1-202ENST00000506252 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
SREK1IP1-202ENST00000506252 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
SREK1IP1-202ENST00000506252 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.86
SREK1IP1-202ENST00000506252 CLASP1Q7Z460 1538 aa20.4■□□□□ 0.86
SREK1IP1-202ENST00000506252 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
SREK1IP1-202ENST00000506252 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
SREK1IP1-202ENST00000506252 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
SREK1IP1-202ENST00000506252 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
SREK1IP1-202ENST00000506252 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
SREK1IP1-202ENST00000506252 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
SREK1IP1-202ENST00000506252 SOGA1O94964 1423 aa20.27■□□□□ 0.83
SREK1IP1-202ENST00000506252 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
SREK1IP1-202ENST00000506252 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
SREK1IP1-202ENST00000506252 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SREK1IP1-202ENST00000506252 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
SREK1IP1-202ENST00000506252 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
SREK1IP1-202ENST00000506252 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
SREK1IP1-202ENST00000506252 PBRM1Q86U86 1689 aa20.14■□□□□ 0.81
SREK1IP1-202ENST00000506252 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
SREK1IP1-202ENST00000506252 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.81
SREK1IP1-202ENST00000506252 CUX1P39880 1505 aa20.04■□□□□ 0.8
SREK1IP1-202ENST00000506252 ILDR1Q86SU0 546 aaPredicted RBP19.97■□□□□ 0.79
SREK1IP1-202ENST00000506252 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
SREK1IP1-202ENST00000506252 ABCA5Q8WWZ7 1642 aa19.93■□□□□ 0.78
SREK1IP1-202ENST00000506252 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
SREK1IP1-202ENST00000506252 SHROOM2Q13796 1616 aa19.88■□□□□ 0.77
SREK1IP1-202ENST00000506252 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
SREK1IP1-202ENST00000506252 KDM4FA0A1W2PPD8 638 aa19.84■□□□□ 0.77
SREK1IP1-202ENST00000506252 NUP160Q12769 1436 aa19.84■□□□□ 0.77
SREK1IP1-202ENST00000506252 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
SREK1IP1-202ENST00000506252 FAM69CQ0P6D2 419 aa19.82■□□□□ 0.76
SREK1IP1-202ENST00000506252 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
SREK1IP1-202ENST00000506252 TSPOAP1O95153 1857 aa19.79■□□□□ 0.76
SREK1IP1-202ENST00000506252 KDM6BO15054 1643 aa19.77■□□□□ 0.76
SREK1IP1-202ENST00000506252 ABCC10Q5T3U5 1492 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms