RNA–Protein interactions for RNA: ENST00000505972.2

CTD-3080P12.3-201, humanhuman

TSL 3

Gene CTD-3080P12.3, Length 697 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-201ENST00000505972 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
CTD-3080P12.3-201ENST00000505972 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
CTD-3080P12.3-201ENST00000505972 ABCC9O60706 1549 aa24.56■■□□□ 1.52
CTD-3080P12.3-201ENST00000505972 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
CTD-3080P12.3-201ENST00000505972 DCAF8L2P0C7V8 631 aa24.17■■□□□ 1.46
CTD-3080P12.3-201ENST00000505972 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
CTD-3080P12.3-201ENST00000505972 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CTD-3080P12.3-201ENST00000505972 NACADO15069 1562 aa23.96■■□□□ 1.43
CTD-3080P12.3-201ENST00000505972 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
CTD-3080P12.3-201ENST00000505972 SCRIBQ14160 1630 aa23.43■■□□□ 1.34
CTD-3080P12.3-201ENST00000505972 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
CTD-3080P12.3-201ENST00000505972 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
CTD-3080P12.3-201ENST00000505972 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
CTD-3080P12.3-201ENST00000505972 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTD-3080P12.3-201ENST00000505972 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
CTD-3080P12.3-201ENST00000505972 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
CTD-3080P12.3-201ENST00000505972 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
CTD-3080P12.3-201ENST00000505972 SMARCA4P51532 1647 aa22.45■■□□□ 1.18
CTD-3080P12.3-201ENST00000505972 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
CTD-3080P12.3-201ENST00000505972 RSF1Q96T23 1441 aaPredicted RBP22.38■■□□□ 1.17
CTD-3080P12.3-201ENST00000505972 SUPT5HO00267 1087 aaKnown RBP22.28■■□□□ 1.16
CTD-3080P12.3-201ENST00000505972 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
CTD-3080P12.3-201ENST00000505972 WIZO95785 1651 aa22.22■■□□□ 1.15
CTD-3080P12.3-201ENST00000505972 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
CTD-3080P12.3-201ENST00000505972 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
CTD-3080P12.3-201ENST00000505972 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
CTD-3080P12.3-201ENST00000505972 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
CTD-3080P12.3-201ENST00000505972 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
CTD-3080P12.3-201ENST00000505972 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
CTD-3080P12.3-201ENST00000505972 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
CTD-3080P12.3-201ENST00000505972 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
CTD-3080P12.3-201ENST00000505972 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
CTD-3080P12.3-201ENST00000505972 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
CTD-3080P12.3-201ENST00000505972 CFTRP13569 1480 aa21.47■■□□□ 1.03
CTD-3080P12.3-201ENST00000505972 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
CTD-3080P12.3-201ENST00000505972 NESP48681 1621 aa21.4■■□□□ 1.02
CTD-3080P12.3-201ENST00000505972 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
CTD-3080P12.3-201ENST00000505972 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
CTD-3080P12.3-201ENST00000505972 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
CTD-3080P12.3-201ENST00000505972 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
CTD-3080P12.3-201ENST00000505972 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
CTD-3080P12.3-201ENST00000505972 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
CTD-3080P12.3-201ENST00000505972 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
CTD-3080P12.3-201ENST00000505972 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
CTD-3080P12.3-201ENST00000505972 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
CTD-3080P12.3-201ENST00000505972 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
CTD-3080P12.3-201ENST00000505972 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
CTD-3080P12.3-201ENST00000505972 CUX1P39880 1505 aa21■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 TOP2BQ02880 1626 aa20.97■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 TOPBP1Q92547 1522 aa20.97■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
CTD-3080P12.3-201ENST00000505972 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
CTD-3080P12.3-201ENST00000505972 WDR62O43379 1518 aa20.92■□□□□ 0.94
CTD-3080P12.3-201ENST00000505972 FGD5Q6ZNL6 1462 aa20.86■□□□□ 0.93
CTD-3080P12.3-201ENST00000505972 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
CTD-3080P12.3-201ENST00000505972 SOGA1O94964 1423 aa20.77■□□□□ 0.91
CTD-3080P12.3-201ENST00000505972 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
CTD-3080P12.3-201ENST00000505972 CUX2O14529 1486 aa20.73■□□□□ 0.91
CTD-3080P12.3-201ENST00000505972 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
CTD-3080P12.3-201ENST00000505972 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
CTD-3080P12.3-201ENST00000505972 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
CTD-3080P12.3-201ENST00000505972 WDR97A6NE52 1622 aa20.63■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 EEA1Q15075 1411 aa20.59■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.89
CTD-3080P12.3-201ENST00000505972 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
CTD-3080P12.3-201ENST00000505972 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
CTD-3080P12.3-201ENST00000505972 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTD-3080P12.3-201ENST00000505972 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
CTD-3080P12.3-201ENST00000505972 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
CTD-3080P12.3-201ENST00000505972 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
CTD-3080P12.3-201ENST00000505972 IGF1RP08069 1367 aa20.46■□□□□ 0.87
CTD-3080P12.3-201ENST00000505972 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
CTD-3080P12.3-201ENST00000505972 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
CTD-3080P12.3-201ENST00000505972 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
CTD-3080P12.3-201ENST00000505972 CUL7Q14999 1698 aa20.37■□□□□ 0.85
CTD-3080P12.3-201ENST00000505972 CARMIL1Q5VZK9 1371 aa20.36■□□□□ 0.85
CTD-3080P12.3-201ENST00000505972 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
CTD-3080P12.3-201ENST00000505972 MAGI1Q96QZ7 1491 aaPredicted RBP20.34■□□□□ 0.85
CTD-3080P12.3-201ENST00000505972 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
CTD-3080P12.3-201ENST00000505972 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
CTD-3080P12.3-201ENST00000505972 KIF21BO75037 1637 aa20.31■□□□□ 0.84
CTD-3080P12.3-201ENST00000505972 ADAMTS12P58397 1594 aa20.3■□□□□ 0.84
CTD-3080P12.3-201ENST00000505972 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
CTD-3080P12.3-201ENST00000505972 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
CTD-3080P12.3-201ENST00000505972 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
CTD-3080P12.3-201ENST00000505972 SYNJ2O15056 1496 aa20.25■□□□□ 0.83
CTD-3080P12.3-201ENST00000505972 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
CTD-3080P12.3-201ENST00000505972 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
CTD-3080P12.3-201ENST00000505972 FBLN2P98095 1184 aa20.22■□□□□ 0.83
CTD-3080P12.3-201ENST00000505972 UBTFP17480 764 aaKnown RBP20.2■□□□□ 0.82
CTD-3080P12.3-201ENST00000505972 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
CTD-3080P12.3-201ENST00000505972 CHD1O14646 1710 aa20.15■□□□□ 0.82
CTD-3080P12.3-201ENST00000505972 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
CTD-3080P12.3-201ENST00000505972 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms