RNA–Protein interactions for RNA: ENST00000505469.1

PPARGC1A-203, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 2

Gene PPARGC1A, Length 406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-203ENST00000505469 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
PPARGC1A-203ENST00000505469 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
PPARGC1A-203ENST00000505469 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
PPARGC1A-203ENST00000505469 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
PPARGC1A-203ENST00000505469 ABCC9O60706 1549 aa18.67■□□□□ 0.58
PPARGC1A-203ENST00000505469 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
PPARGC1A-203ENST00000505469 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
PPARGC1A-203ENST00000505469 NACADO15069 1562 aa18.13■□□□□ 0.49
PPARGC1A-203ENST00000505469 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
PPARGC1A-203ENST00000505469 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
PPARGC1A-203ENST00000505469 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
PPARGC1A-203ENST00000505469 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
PPARGC1A-203ENST00000505469 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
PPARGC1A-203ENST00000505469 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
PPARGC1A-203ENST00000505469 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
PPARGC1A-203ENST00000505469 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
PPARGC1A-203ENST00000505469 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
PPARGC1A-203ENST00000505469 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPARGC1A-203ENST00000505469 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
PPARGC1A-203ENST00000505469 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
PPARGC1A-203ENST00000505469 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
PPARGC1A-203ENST00000505469 FOXD1Q16676 465 aa16.94■□□□□ 0.3
PPARGC1A-203ENST00000505469 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
PPARGC1A-203ENST00000505469 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
PPARGC1A-203ENST00000505469 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
PPARGC1A-203ENST00000505469 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
PPARGC1A-203ENST00000505469 PEG3Q9GZU2 1588 aa16.68■□□□□ 0.26
PPARGC1A-203ENST00000505469 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
PPARGC1A-203ENST00000505469 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
PPARGC1A-203ENST00000505469 ATAD2BQ9ULI0 1458 aa16.59■□□□□ 0.25
PPARGC1A-203ENST00000505469 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
PPARGC1A-203ENST00000505469 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
PPARGC1A-203ENST00000505469 PLPPR3Q6T4P5 718 aa16.44■□□□□ 0.22
PPARGC1A-203ENST00000505469 WIZO95785 1651 aa16.33■□□□□ 0.2
PPARGC1A-203ENST00000505469 LAMC3Q9Y6N6 1575 aa16.32■□□□□ 0.2
PPARGC1A-203ENST00000505469 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
PPARGC1A-203ENST00000505469 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
PPARGC1A-203ENST00000505469 CUX2O14529 1486 aa16.19■□□□□ 0.18
PPARGC1A-203ENST00000505469 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
PPARGC1A-203ENST00000505469 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
PPARGC1A-203ENST00000505469 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
PPARGC1A-203ENST00000505469 NESP48681 1621 aa16.12■□□□□ 0.17
PPARGC1A-203ENST00000505469 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
PPARGC1A-203ENST00000505469 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
PPARGC1A-203ENST00000505469 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
PPARGC1A-203ENST00000505469 CFTRP13569 1480 aa16.03■□□□□ 0.16
PPARGC1A-203ENST00000505469 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
PPARGC1A-203ENST00000505469 ADRA2BP18089 450 aa15.99■□□□□ 0.15
PPARGC1A-203ENST00000505469 WDR62O43379 1518 aa15.95■□□□□ 0.14
PPARGC1A-203ENST00000505469 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
PPARGC1A-203ENST00000505469 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
PPARGC1A-203ENST00000505469 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
PPARGC1A-203ENST00000505469 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
PPARGC1A-203ENST00000505469 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
PPARGC1A-203ENST00000505469 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
PPARGC1A-203ENST00000505469 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
PPARGC1A-203ENST00000505469 MSH5O43196 834 aa15.73■□□□□ 0.11
PPARGC1A-203ENST00000505469 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
PPARGC1A-203ENST00000505469 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
PPARGC1A-203ENST00000505469 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
PPARGC1A-203ENST00000505469 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
PPARGC1A-203ENST00000505469 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
PPARGC1A-203ENST00000505469 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
PPARGC1A-203ENST00000505469 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
PPARGC1A-203ENST00000505469 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.07
PPARGC1A-203ENST00000505469 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
PPARGC1A-203ENST00000505469 CUX1P39880 1505 aa15.48■□□□□ 0.07
PPARGC1A-203ENST00000505469 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
PPARGC1A-203ENST00000505469 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
PPARGC1A-203ENST00000505469 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
PPARGC1A-203ENST00000505469 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
PPARGC1A-203ENST00000505469 CHD1O14646 1710 aa15.4■□□□□ 0.06
PPARGC1A-203ENST00000505469 SOGA1O94964 1423 aa15.39■□□□□ 0.05
PPARGC1A-203ENST00000505469 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
PPARGC1A-203ENST00000505469 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
PPARGC1A-203ENST00000505469 ABCA5Q8WWZ7 1642 aa15.35■□□□□ 0.05
PPARGC1A-203ENST00000505469 MAGI1Q96QZ7 1491 aaPredicted RBP15.34■□□□□ 0.05
PPARGC1A-203ENST00000505469 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
PPARGC1A-203ENST00000505469 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
PPARGC1A-203ENST00000505469 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
PPARGC1A-203ENST00000505469 AQRO60306 1485 aaKnown RBP eCLIP15.32■□□□□ 0.04
PPARGC1A-203ENST00000505469 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
PPARGC1A-203ENST00000505469 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
PPARGC1A-203ENST00000505469 GAPVD1Q14C86 1478 aa15.27■□□□□ 0.04
PPARGC1A-203ENST00000505469 SYNJ2O15056 1496 aa15.24■□□□□ 0.03
PPARGC1A-203ENST00000505469 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
PPARGC1A-203ENST00000505469 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
PPARGC1A-203ENST00000505469 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
PPARGC1A-203ENST00000505469 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
PPARGC1A-203ENST00000505469 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
PPARGC1A-203ENST00000505469 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
PPARGC1A-203ENST00000505469 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
PPARGC1A-203ENST00000505469 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
PPARGC1A-203ENST00000505469 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
PPARGC1A-203ENST00000505469 CUL7Q14999 1698 aa15.12■□□□□ 0.01
PPARGC1A-203ENST00000505469 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
PPARGC1A-203ENST00000505469 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
PPARGC1A-203ENST00000505469 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
PPARGC1A-203ENST00000505469 NUP160Q12769 1436 aa15.06■□□□□ 0
PPARGC1A-203ENST00000505469 SHROOM2Q13796 1616 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms