RNA–Protein interactions for RNA: ENST00000505414.5

RBM47-205, Transcript of RNA binding motif protein 47, humanhuman

TSL 3

Gene RBM47, Length 856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-205ENST00000505414 NISCHQ9Y2I1 1504 aa42.96■■■■■ 4.47
RBM47-205ENST00000505414 CCDC180Q9P1Z9 1646 aa38.44■■■■□ 3.74
RBM47-205ENST00000505414 ABCC9O60706 1549 aa38.28■■■■□ 3.72
RBM47-205ENST00000505414 RB1CC1Q8TDY2 1594 aa36.51■■■■□ 3.44
RBM47-205ENST00000505414 NACADO15069 1562 aa36.33■■■■□ 3.41
RBM47-205ENST00000505414 DCAF8L2P0C7V8 631 aa36.05■■■■□ 3.36
RBM47-205ENST00000505414 MYO15BQ96JP2 1530 aa35.96■■■■□ 3.35
RBM47-205ENST00000505414 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
RBM47-205ENST00000505414 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
RBM47-205ENST00000505414 UNC13AQ9UPW8 1703 aa35.68■■■■□ 3.3
RBM47-205ENST00000505414 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
RBM47-205ENST00000505414 DCAF1Q9Y4B6 1507 aa35.6■■■■□ 3.29
RBM47-205ENST00000505414 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.28
RBM47-205ENST00000505414 SHROOM4Q9ULL8 1493 aa35.05■■■■□ 3.2
RBM47-205ENST00000505414 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
RBM47-205ENST00000505414 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
RBM47-205ENST00000505414 EIF4G1Q04637 1599 aaKnown RBP34.59■■■■□ 3.13
RBM47-205ENST00000505414 CECR2Q9BXF3 1484 aa34.49■■■■□ 3.11
RBM47-205ENST00000505414 NCAPD3P42695 1498 aa33.59■■■□□ 2.97
RBM47-205ENST00000505414 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
RBM47-205ENST00000505414 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
RBM47-205ENST00000505414 SMARCA2P51531 1590 aa33.35■■■□□ 2.93
RBM47-205ENST00000505414 HMGXB3Q12766 1538 aa33.32■■■□□ 2.92
RBM47-205ENST00000505414 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
RBM47-205ENST00000505414 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
RBM47-205ENST00000505414 BAZ1BQ9UIG0 1483 aaKnown RBP33.11■■■□□ 2.89
RBM47-205ENST00000505414 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
RBM47-205ENST00000505414 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
RBM47-205ENST00000505414 CUX2O14529 1486 aa32.97■■■□□ 2.87
RBM47-205ENST00000505414 NESP48681 1621 aa32.95■■■□□ 2.87
RBM47-205ENST00000505414 RSF1Q96T23 1441 aaPredicted RBP32.84■■■□□ 2.85
RBM47-205ENST00000505414 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
RBM47-205ENST00000505414 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
RBM47-205ENST00000505414 WIZO95785 1651 aa32.66■■■□□ 2.82
RBM47-205ENST00000505414 THOC2Q8NI27 1593 aaKnown RBP32.6■■■□□ 2.81
RBM47-205ENST00000505414 CADPSQ9ULU8 1353 aa32.55■■■□□ 2.8
RBM47-205ENST00000505414 PDS5BQ9NTI5 1447 aa32.54■■■□□ 2.8
RBM47-205ENST00000505414 KIF21AQ7Z4S6 1674 aa32.49■■■□□ 2.79
RBM47-205ENST00000505414 TOP2AP11388 1531 aaKnown RBP32.38■■■□□ 2.77
RBM47-205ENST00000505414 SUPT5HO00267 1087 aaKnown RBP32.27■■■□□ 2.76
RBM47-205ENST00000505414 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
RBM47-205ENST00000505414 CFTRP13569 1480 aa32.23■■■□□ 2.75
RBM47-205ENST00000505414 WDR62O43379 1518 aa32.2■■■□□ 2.74
RBM47-205ENST00000505414 FANCD2Q9BXW9 1451 aa32.14■■■□□ 2.74
RBM47-205ENST00000505414 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
RBM47-205ENST00000505414 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
RBM47-205ENST00000505414 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
RBM47-205ENST00000505414 PRDM2Q13029 1718 aa31.8■■■□□ 2.68
RBM47-205ENST00000505414 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
RBM47-205ENST00000505414 IFT140Q96RY7 1462 aa31.52■■■□□ 2.64
RBM47-205ENST00000505414 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
RBM47-205ENST00000505414 ZNF608Q9ULD9 1512 aaPredicted RBP31.48■■■□□ 2.63
RBM47-205ENST00000505414 OSCARQ8IYS5 282 aa31.47■■■□□ 2.63
RBM47-205ENST00000505414 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
RBM47-205ENST00000505414 TRIM41Q8WV44 630 aa31.31■■■□□ 2.6
RBM47-205ENST00000505414 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
RBM47-205ENST00000505414 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.6
RBM47-205ENST00000505414 POLA1P09884 1462 aaPredicted RBP31.26■■■□□ 2.59
RBM47-205ENST00000505414 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.58
RBM47-205ENST00000505414 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
RBM47-205ENST00000505414 SOGA1O94964 1423 aa31.09■■■□□ 2.57
RBM47-205ENST00000505414 CUX1P39880 1505 aa31.08■■■□□ 2.57
RBM47-205ENST00000505414 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
RBM47-205ENST00000505414 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
RBM47-205ENST00000505414 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
RBM47-205ENST00000505414 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
RBM47-205ENST00000505414 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
RBM47-205ENST00000505414 ARHGEF11O15085 1522 aa30.98■■■□□ 2.55
RBM47-205ENST00000505414 CHD1O14646 1710 aa30.96■■■□□ 2.55
RBM47-205ENST00000505414 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
RBM47-205ENST00000505414 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.54
RBM47-205ENST00000505414 FBLN2P98095 1184 aa30.86■■■□□ 2.53
RBM47-205ENST00000505414 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
RBM47-205ENST00000505414 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
RBM47-205ENST00000505414 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
RBM47-205ENST00000505414 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
RBM47-205ENST00000505414 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
RBM47-205ENST00000505414 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
RBM47-205ENST00000505414 ABCA10Q8WWZ4 1543 aa30.75■■■□□ 2.51
RBM47-205ENST00000505414 GAPVD1Q14C86 1478 aa30.72■■■□□ 2.51
RBM47-205ENST00000505414 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
RBM47-205ENST00000505414 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
RBM47-205ENST00000505414 SYNJ2O15056 1496 aa30.7■■■□□ 2.51
RBM47-205ENST00000505414 CYB5RLQ6IPT4 315 aa30.7■■■□□ 2.51
RBM47-205ENST00000505414 ARAP1Q96P48 1450 aa30.7■■■□□ 2.5
RBM47-205ENST00000505414 ABCA5Q8WWZ7 1642 aa30.67■■■□□ 2.5
RBM47-205ENST00000505414 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
RBM47-205ENST00000505414 CHIC1Q5VXU3 224 aa30.48■■■□□ 2.47
RBM47-205ENST00000505414 GRIN2AQ12879 1464 aa30.42■■■□□ 2.46
RBM47-205ENST00000505414 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
RBM47-205ENST00000505414 NUP160Q12769 1436 aa30.36■■■□□ 2.45
RBM47-205ENST00000505414 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
RBM47-205ENST00000505414 ERICH3Q5RHP9 1530 aa30.35■■■□□ 2.45
RBM47-205ENST00000505414 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
RBM47-205ENST00000505414 KIF27Q86VH2 1401 aa30.3■■■□□ 2.44
RBM47-205ENST00000505414 TRHP20396 242 aaPredicted RBP30.24■■■□□ 2.43
RBM47-205ENST00000505414 ERCC6L2Q5T890 1561 aa30.23■■■□□ 2.43
RBM47-205ENST00000505414 SHROOM2Q13796 1616 aa30.18■■■□□ 2.42
RBM47-205ENST00000505414 IGF1RP08069 1367 aa30.12■■■□□ 2.41
RBM47-205ENST00000505414 EEA1Q15075 1411 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms