RNA–Protein interactions for RNA: ENST00000505376.1

SLC1A3-207, Transcript of solute carrier family 1 member 3, humanhuman

TSL 4

Gene SLC1A3, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-207ENST00000505376 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
SLC1A3-207ENST00000505376 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
SLC1A3-207ENST00000505376 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
SLC1A3-207ENST00000505376 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
SLC1A3-207ENST00000505376 ABCC9O60706 1549 aa17.67■□□□□ 0.42
SLC1A3-207ENST00000505376 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
SLC1A3-207ENST00000505376 NACADO15069 1562 aa16.81■□□□□ 0.28
SLC1A3-207ENST00000505376 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
SLC1A3-207ENST00000505376 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
SLC1A3-207ENST00000505376 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
SLC1A3-207ENST00000505376 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
SLC1A3-207ENST00000505376 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
SLC1A3-207ENST00000505376 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
SLC1A3-207ENST00000505376 SCRIBQ14160 1630 aa16.4■□□□□ 0.22
SLC1A3-207ENST00000505376 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
SLC1A3-207ENST00000505376 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
SLC1A3-207ENST00000505376 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
SLC1A3-207ENST00000505376 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
SLC1A3-207ENST00000505376 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
SLC1A3-207ENST00000505376 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
SLC1A3-207ENST00000505376 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
SLC1A3-207ENST00000505376 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
SLC1A3-207ENST00000505376 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
SLC1A3-207ENST00000505376 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
SLC1A3-207ENST00000505376 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
SLC1A3-207ENST00000505376 ATAD2BQ9ULI0 1458 aa15.5■□□□□ 0.07
SLC1A3-207ENST00000505376 HMGXB3Q12766 1538 aa15.46■□□□□ 0.07
SLC1A3-207ENST00000505376 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
SLC1A3-207ENST00000505376 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
SLC1A3-207ENST00000505376 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
SLC1A3-207ENST00000505376 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
SLC1A3-207ENST00000505376 WIZO95785 1651 aa15.3■□□□□ 0.04
SLC1A3-207ENST00000505376 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
SLC1A3-207ENST00000505376 NESP48681 1621 aa15.23■□□□□ 0.03
SLC1A3-207ENST00000505376 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
SLC1A3-207ENST00000505376 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
SLC1A3-207ENST00000505376 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
SLC1A3-207ENST00000505376 KIF21AQ7Z4S6 1674 aa15.1■□□□□ 0.01
SLC1A3-207ENST00000505376 CUX2O14529 1486 aa15.08■□□□□ 0.01
SLC1A3-207ENST00000505376 FOXD1Q16676 465 aa15.08■□□□□ 0
SLC1A3-207ENST00000505376 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
SLC1A3-207ENST00000505376 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
SLC1A3-207ENST00000505376 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
SLC1A3-207ENST00000505376 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
SLC1A3-207ENST00000505376 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
SLC1A3-207ENST00000505376 CFTRP13569 1480 aa14.92□□□□□ -0.02
SLC1A3-207ENST00000505376 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
SLC1A3-207ENST00000505376 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
SLC1A3-207ENST00000505376 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
SLC1A3-207ENST00000505376 WDR62O43379 1518 aa14.88□□□□□ -0.03
SLC1A3-207ENST00000505376 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
SLC1A3-207ENST00000505376 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
SLC1A3-207ENST00000505376 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
SLC1A3-207ENST00000505376 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
SLC1A3-207ENST00000505376 DNMBPQ6XZF7 1577 aa14.66□□□□□ -0.06
SLC1A3-207ENST00000505376 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
SLC1A3-207ENST00000505376 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
SLC1A3-207ENST00000505376 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
SLC1A3-207ENST00000505376 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
SLC1A3-207ENST00000505376 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
SLC1A3-207ENST00000505376 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
SLC1A3-207ENST00000505376 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
SLC1A3-207ENST00000505376 CUX1P39880 1505 aa14.51□□□□□ -0.09
SLC1A3-207ENST00000505376 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
SLC1A3-207ENST00000505376 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
SLC1A3-207ENST00000505376 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.1
SLC1A3-207ENST00000505376 SOGA1O94964 1423 aa14.42□□□□□ -0.1
SLC1A3-207ENST00000505376 WDR97A6NE52 1622 aa14.41□□□□□ -0.1
SLC1A3-207ENST00000505376 CHD1O14646 1710 aa14.4□□□□□ -0.1
SLC1A3-207ENST00000505376 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
SLC1A3-207ENST00000505376 ADRA2BP18089 450 aa14.37□□□□□ -0.11
SLC1A3-207ENST00000505376 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
SLC1A3-207ENST00000505376 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
SLC1A3-207ENST00000505376 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
SLC1A3-207ENST00000505376 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
SLC1A3-207ENST00000505376 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
SLC1A3-207ENST00000505376 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
SLC1A3-207ENST00000505376 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
SLC1A3-207ENST00000505376 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
SLC1A3-207ENST00000505376 FBLN2P98095 1184 aa14.32□□□□□ -0.12
SLC1A3-207ENST00000505376 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
SLC1A3-207ENST00000505376 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
SLC1A3-207ENST00000505376 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
SLC1A3-207ENST00000505376 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
SLC1A3-207ENST00000505376 GAPVD1Q14C86 1478 aa14.29□□□□□ -0.12
SLC1A3-207ENST00000505376 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
SLC1A3-207ENST00000505376 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.12
SLC1A3-207ENST00000505376 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.12
SLC1A3-207ENST00000505376 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.12
SLC1A3-207ENST00000505376 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
SLC1A3-207ENST00000505376 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
SLC1A3-207ENST00000505376 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
SLC1A3-207ENST00000505376 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
SLC1A3-207ENST00000505376 CHMP7Q8WUX9 453 aaPredicted RBP14.21□□□□□ -0.13
SLC1A3-207ENST00000505376 CLASP1Q7Z460 1538 aa14.18□□□□□ -0.14
SLC1A3-207ENST00000505376 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
SLC1A3-207ENST00000505376 ERICH3Q5RHP9 1530 aa14.14□□□□□ -0.15
SLC1A3-207ENST00000505376 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
SLC1A3-207ENST00000505376 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
SLC1A3-207ENST00000505376 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms