RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
SIL1-206ENST00000505353 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
SIL1-206ENST00000505353 ABCC9O60706 1549 aa20.12■□□□□ 0.81
SIL1-206ENST00000505353 NACADO15069 1562 aa19.34■□□□□ 0.69
SIL1-206ENST00000505353 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
SIL1-206ENST00000505353 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
SIL1-206ENST00000505353 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
SIL1-206ENST00000505353 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
SIL1-206ENST00000505353 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
SIL1-206ENST00000505353 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
SIL1-206ENST00000505353 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
SIL1-206ENST00000505353 PABPN1Q86U42 306 aaKnown RBP eCLIP18.83■□□□□ 0.6
SIL1-206ENST00000505353 SCRIBQ14160 1630 aa18.71■□□□□ 0.58
SIL1-206ENST00000505353 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
SIL1-206ENST00000505353 SHROOM4Q9ULL8 1493 aa18.57■□□□□ 0.56
SIL1-206ENST00000505353 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
SIL1-206ENST00000505353 CC2D2AQ9P2K1 1620 aa18.21■□□□□ 0.51
SIL1-206ENST00000505353 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
SIL1-206ENST00000505353 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SIL1-206ENST00000505353 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
SIL1-206ENST00000505353 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
SIL1-206ENST00000505353 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
SIL1-206ENST00000505353 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
SIL1-206ENST00000505353 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
SIL1-206ENST00000505353 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
SIL1-206ENST00000505353 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
SIL1-206ENST00000505353 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
SIL1-206ENST00000505353 BAZ1BQ9UIG0 1483 aaKnown RBP17.67■□□□□ 0.42
SIL1-206ENST00000505353 WIZO95785 1651 aa17.63■□□□□ 0.41
SIL1-206ENST00000505353 NESP48681 1621 aa17.44■□□□□ 0.38
SIL1-206ENST00000505353 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
SIL1-206ENST00000505353 CADPSQ9ULU8 1353 aa17.36■□□□□ 0.37
SIL1-206ENST00000505353 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
SIL1-206ENST00000505353 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
SIL1-206ENST00000505353 CFTRP13569 1480 aa17.26■□□□□ 0.35
SIL1-206ENST00000505353 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
SIL1-206ENST00000505353 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
SIL1-206ENST00000505353 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
SIL1-206ENST00000505353 CUX2O14529 1486 aa17.16■□□□□ 0.34
SIL1-206ENST00000505353 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
SIL1-206ENST00000505353 FANCD2Q9BXW9 1451 aa17.12■□□□□ 0.33
SIL1-206ENST00000505353 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
SIL1-206ENST00000505353 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
SIL1-206ENST00000505353 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
SIL1-206ENST00000505353 WDR62O43379 1518 aa17.03■□□□□ 0.32
SIL1-206ENST00000505353 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
SIL1-206ENST00000505353 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
SIL1-206ENST00000505353 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
SIL1-206ENST00000505353 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
SIL1-206ENST00000505353 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
SIL1-206ENST00000505353 CUX1P39880 1505 aa16.74■□□□□ 0.27
SIL1-206ENST00000505353 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
SIL1-206ENST00000505353 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
SIL1-206ENST00000505353 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
SIL1-206ENST00000505353 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
SIL1-206ENST00000505353 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
SIL1-206ENST00000505353 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
SIL1-206ENST00000505353 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
SIL1-206ENST00000505353 SOGA1O94964 1423 aa16.64■□□□□ 0.25
SIL1-206ENST00000505353 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
SIL1-206ENST00000505353 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
SIL1-206ENST00000505353 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
SIL1-206ENST00000505353 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
SIL1-206ENST00000505353 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
SIL1-206ENST00000505353 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
SIL1-206ENST00000505353 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
SIL1-206ENST00000505353 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
SIL1-206ENST00000505353 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
SIL1-206ENST00000505353 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
SIL1-206ENST00000505353 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SIL1-206ENST00000505353 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
SIL1-206ENST00000505353 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
SIL1-206ENST00000505353 SNAPC4Q5SXM2 1469 aa16.4■□□□□ 0.22
SIL1-206ENST00000505353 MAGI1Q96QZ7 1491 aaPredicted RBP16.39■□□□□ 0.21
SIL1-206ENST00000505353 CHD1O14646 1710 aa16.35■□□□□ 0.21
SIL1-206ENST00000505353 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
SIL1-206ENST00000505353 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
SIL1-206ENST00000505353 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
SIL1-206ENST00000505353 FBLN2P98095 1184 aa16.3■□□□□ 0.2
SIL1-206ENST00000505353 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
SIL1-206ENST00000505353 IGF1RP08069 1367 aa16.26■□□□□ 0.19
SIL1-206ENST00000505353 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
SIL1-206ENST00000505353 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SIL1-206ENST00000505353 CLASP1Q7Z460 1538 aa16.24■□□□□ 0.19
SIL1-206ENST00000505353 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
SIL1-206ENST00000505353 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
SIL1-206ENST00000505353 NUP160Q12769 1436 aa16.19■□□□□ 0.18
SIL1-206ENST00000505353 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
SIL1-206ENST00000505353 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
SIL1-206ENST00000505353 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
SIL1-206ENST00000505353 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
SIL1-206ENST00000505353 RUSC2Q8N2Y8 1516 aa16.16■□□□□ 0.18
SIL1-206ENST00000505353 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
SIL1-206ENST00000505353 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
SIL1-206ENST00000505353 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
SIL1-206ENST00000505353 CUL7Q14999 1698 aa16.1■□□□□ 0.17
SIL1-206ENST00000505353 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
SIL1-206ENST00000505353 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
SIL1-206ENST00000505353 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
SIL1-206ENST00000505353 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms