RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
TRIM23-204ENST00000505205 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
TRIM23-204ENST00000505205 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
TRIM23-204ENST00000505205 ABCC9O60706 1549 aa21.7■■□□□ 1.07
TRIM23-204ENST00000505205 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
TRIM23-204ENST00000505205 DNAJC5BQ9UF47 199 aa20.7■□□□□ 0.9
TRIM23-204ENST00000505205 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
TRIM23-204ENST00000505205 NACADO15069 1562 aa20.22■□□□□ 0.83
TRIM23-204ENST00000505205 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM23-204ENST00000505205 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
TRIM23-204ENST00000505205 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
TRIM23-204ENST00000505205 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
TRIM23-204ENST00000505205 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
TRIM23-204ENST00000505205 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
TRIM23-204ENST00000505205 CC2D2AQ9P2K1 1620 aa19.6■□□□□ 0.73
TRIM23-204ENST00000505205 CECR2Q9BXF3 1484 aa19.58■□□□□ 0.72
TRIM23-204ENST00000505205 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
TRIM23-204ENST00000505205 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
TRIM23-204ENST00000505205 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
TRIM23-204ENST00000505205 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
TRIM23-204ENST00000505205 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
TRIM23-204ENST00000505205 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
TRIM23-204ENST00000505205 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
TRIM23-204ENST00000505205 CUX2O14529 1486 aa18.84■□□□□ 0.61
TRIM23-204ENST00000505205 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
TRIM23-204ENST00000505205 NCAPD3P42695 1498 aa18.67■□□□□ 0.58
TRIM23-204ENST00000505205 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
TRIM23-204ENST00000505205 NESP48681 1621 aa18.55■□□□□ 0.56
TRIM23-204ENST00000505205 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
TRIM23-204ENST00000505205 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
TRIM23-204ENST00000505205 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
TRIM23-204ENST00000505205 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
TRIM23-204ENST00000505205 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
TRIM23-204ENST00000505205 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
TRIM23-204ENST00000505205 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
TRIM23-204ENST00000505205 BAZ1AQ9NRL2 1556 aaPredicted RBP18.3■□□□□ 0.52
TRIM23-204ENST00000505205 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
TRIM23-204ENST00000505205 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
TRIM23-204ENST00000505205 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
TRIM23-204ENST00000505205 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
TRIM23-204ENST00000505205 PLPPR3Q6T4P5 718 aa18.13■□□□□ 0.49
TRIM23-204ENST00000505205 MRC2Q9UBG0 1479 aa18.1■□□□□ 0.49
TRIM23-204ENST00000505205 WDR62O43379 1518 aa18.08■□□□□ 0.49
TRIM23-204ENST00000505205 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
TRIM23-204ENST00000505205 WIZO95785 1651 aa17.96■□□□□ 0.47
TRIM23-204ENST00000505205 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
TRIM23-204ENST00000505205 FOXD1Q16676 465 aa17.93■□□□□ 0.46
TRIM23-204ENST00000505205 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.45
TRIM23-204ENST00000505205 OSCARQ8IYS5 282 aa17.87■□□□□ 0.45
TRIM23-204ENST00000505205 CFTRP13569 1480 aa17.8■□□□□ 0.44
TRIM23-204ENST00000505205 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
TRIM23-204ENST00000505205 RIMBP3CA6NJZ7 1639 aa17.77■□□□□ 0.44
TRIM23-204ENST00000505205 RIMBP3BA6NNM3 1639 aa17.77■□□□□ 0.44
TRIM23-204ENST00000505205 RIMBP3Q9UFD9 1639 aa17.77■□□□□ 0.44
TRIM23-204ENST00000505205 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
TRIM23-204ENST00000505205 PRDM2Q13029 1718 aa17.66■□□□□ 0.42
TRIM23-204ENST00000505205 ARHGEF11O15085 1522 aa17.65■□□□□ 0.42
TRIM23-204ENST00000505205 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
TRIM23-204ENST00000505205 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
TRIM23-204ENST00000505205 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
TRIM23-204ENST00000505205 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
TRIM23-204ENST00000505205 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
TRIM23-204ENST00000505205 CYB5RLQ6IPT4 315 aa17.51■□□□□ 0.39
TRIM23-204ENST00000505205 CHD1O14646 1710 aa17.5■□□□□ 0.39
TRIM23-204ENST00000505205 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
TRIM23-204ENST00000505205 ARAP1Q96P48 1450 aa17.45■□□□□ 0.38
TRIM23-204ENST00000505205 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
TRIM23-204ENST00000505205 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
TRIM23-204ENST00000505205 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
TRIM23-204ENST00000505205 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIM23-204ENST00000505205 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
TRIM23-204ENST00000505205 FBLN2P98095 1184 aa17.35■□□□□ 0.37
TRIM23-204ENST00000505205 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
TRIM23-204ENST00000505205 PPP6R1Q9UPN7 881 aa17.32■□□□□ 0.36
TRIM23-204ENST00000505205 ADRA2BP18089 450 aa17.3■□□□□ 0.36
TRIM23-204ENST00000505205 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
TRIM23-204ENST00000505205 CLASP1Q7Z460 1538 aa17.26■□□□□ 0.35
TRIM23-204ENST00000505205 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
TRIM23-204ENST00000505205 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
TRIM23-204ENST00000505205 SOGA1O94964 1423 aa17.21■□□□□ 0.34
TRIM23-204ENST00000505205 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
TRIM23-204ENST00000505205 WDR97A6NE52 1622 aa17.18■□□□□ 0.34
TRIM23-204ENST00000505205 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
TRIM23-204ENST00000505205 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
TRIM23-204ENST00000505205 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
TRIM23-204ENST00000505205 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
TRIM23-204ENST00000505205 SYNJ2O15056 1496 aa17.1■□□□□ 0.33
TRIM23-204ENST00000505205 CUX1P39880 1505 aa17.1■□□□□ 0.33
TRIM23-204ENST00000505205 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
TRIM23-204ENST00000505205 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
TRIM23-204ENST00000505205 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
TRIM23-204ENST00000505205 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
TRIM23-204ENST00000505205 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
TRIM23-204ENST00000505205 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
TRIM23-204ENST00000505205 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
TRIM23-204ENST00000505205 CEP170Q5SW79 1584 aa16.89■□□□□ 0.3
TRIM23-204ENST00000505205 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
TRIM23-204ENST00000505205 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
TRIM23-204ENST00000505205 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
TRIM23-204ENST00000505205 NUP160Q12769 1436 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms