RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-208ENST00000505187 NISCHQ9Y2I1 1504 aa49.16■■■■■ 5.46
SPOCK3-208ENST00000505187 CCDC180Q9P1Z9 1646 aa43.28■■■■■ 4.52
SPOCK3-208ENST00000505187 ZCCHC6Q5VYS8 1495 aaKnown RBP41.22■■■■■ 4.19
SPOCK3-208ENST00000505187 ABCC9O60706 1549 aa41.06■■■■■ 4.16
SPOCK3-208ENST00000505187 DCAF1Q9Y4B6 1507 aa40.79■■■■■ 4.12
SPOCK3-208ENST00000505187 MYO15BQ96JP2 1530 aa40.54■■■■■ 4.08
SPOCK3-208ENST00000505187 DCAF8L2P0C7V8 631 aa40.44■■■■■ 4.06
SPOCK3-208ENST00000505187 NACADO15069 1562 aa40.36■■■■■ 4.05
SPOCK3-208ENST00000505187 RB1CC1Q8TDY2 1594 aa40.11■■■■■ 4.01
SPOCK3-208ENST00000505187 SCRIBQ14160 1630 aa39.48■■■■□ 3.91
SPOCK3-208ENST00000505187 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
SPOCK3-208ENST00000505187 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
SPOCK3-208ENST00000505187 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
SPOCK3-208ENST00000505187 PABPN1Q86U42 306 aaKnown RBP eCLIP38.51■■■■□ 3.76
SPOCK3-208ENST00000505187 CECR2Q9BXF3 1484 aa38.12■■■■□ 3.69
SPOCK3-208ENST00000505187 BAZ1AQ9NRL2 1556 aaPredicted RBP38.05■■■■□ 3.68
SPOCK3-208ENST00000505187 SMARCA4P51532 1647 aa37.92■■■■□ 3.66
SPOCK3-208ENST00000505187 MROH2BQ7Z745 1585 aa37.88■■■■□ 3.66
SPOCK3-208ENST00000505187 RSF1Q96T23 1441 aaPredicted RBP37.87■■■■□ 3.65
SPOCK3-208ENST00000505187 EIF4G1Q04637 1599 aaKnown RBP37.71■■■■□ 3.63
SPOCK3-208ENST00000505187 SUPT5HO00267 1087 aaKnown RBP37.71■■■■□ 3.63
SPOCK3-208ENST00000505187 WIZO95785 1651 aa37.56■■■■□ 3.6
SPOCK3-208ENST00000505187 PEG3Q9GZU2 1588 aa37.56■■■■□ 3.6
SPOCK3-208ENST00000505187 SMARCA2P51531 1590 aa37.43■■■■□ 3.58
SPOCK3-208ENST00000505187 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
SPOCK3-208ENST00000505187 CC2D2AQ9P2K1 1620 aa37.26■■■■□ 3.56
SPOCK3-208ENST00000505187 TOP2AP11388 1531 aaKnown RBP37.25■■■■□ 3.55
SPOCK3-208ENST00000505187 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
SPOCK3-208ENST00000505187 HMGXB3Q12766 1538 aa37.16■■■■□ 3.54
SPOCK3-208ENST00000505187 BAZ1BQ9UIG0 1483 aaKnown RBP37.14■■■■□ 3.54
SPOCK3-208ENST00000505187 CCDC88BA6NC98 1476 aa36.76■■■■□ 3.47
SPOCK3-208ENST00000505187 DNAJC5BQ9UF47 199 aa36.57■■■■□ 3.44
SPOCK3-208ENST00000505187 CFTRP13569 1480 aa36.2■■■■□ 3.39
SPOCK3-208ENST00000505187 PRDM2Q13029 1718 aa36.17■■■■□ 3.38
SPOCK3-208ENST00000505187 CADPSQ9ULU8 1353 aa36.15■■■■□ 3.38
SPOCK3-208ENST00000505187 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
SPOCK3-208ENST00000505187 CHIC1Q5VXU3 224 aa35.94■■■■□ 3.34
SPOCK3-208ENST00000505187 NESP48681 1621 aa35.89■■■■□ 3.34
SPOCK3-208ENST00000505187 ABCC8Q09428 1581 aa35.77■■■■□ 3.32
SPOCK3-208ENST00000505187 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
SPOCK3-208ENST00000505187 PDS5BQ9NTI5 1447 aa35.72■■■■□ 3.31
SPOCK3-208ENST00000505187 WRNQ14191 1432 aaPredicted RBP eCLIP35.69■■■■□ 3.3
SPOCK3-208ENST00000505187 TRIM41Q8WV44 630 aa35.6■■■■□ 3.29
SPOCK3-208ENST00000505187 KIF21AQ7Z4S6 1674 aa35.59■■■■□ 3.29
SPOCK3-208ENST00000505187 CEP164Q9UPV0 1460 aa35.59■■■■□ 3.29
SPOCK3-208ENST00000505187 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
SPOCK3-208ENST00000505187 BIVM-ERCC5R4GMW8 1640 aa35.54■■■■□ 3.28
SPOCK3-208ENST00000505187 TOP2BQ02880 1626 aa35.53■■■■□ 3.28
SPOCK3-208ENST00000505187 CUX1P39880 1505 aa35.48■■■■□ 3.27
SPOCK3-208ENST00000505187 DNMBPQ6XZF7 1577 aa35.41■■■■□ 3.26
SPOCK3-208ENST00000505187 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
SPOCK3-208ENST00000505187 ERCC6Q03468 1493 aa35.31■■■■□ 3.24
SPOCK3-208ENST00000505187 MRC2Q9UBG0 1479 aa35.3■■■■□ 3.24
SPOCK3-208ENST00000505187 URB2Q14146 1524 aaKnown RBP35.3■■■■□ 3.24
SPOCK3-208ENST00000505187 FGD5Q6ZNL6 1462 aa35.17■■■■□ 3.22
SPOCK3-208ENST00000505187 WDR62O43379 1518 aa35.17■■■■□ 3.22
SPOCK3-208ENST00000505187 THOC2Q8NI27 1593 aaKnown RBP35.16■■■■□ 3.22
SPOCK3-208ENST00000505187 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
SPOCK3-208ENST00000505187 EEA1Q15075 1411 aa35.02■■■■□ 3.2
SPOCK3-208ENST00000505187 SOGA1O94964 1423 aa34.96■■■■□ 3.19
SPOCK3-208ENST00000505187 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
SPOCK3-208ENST00000505187 WDR97A6NE52 1622 aa34.91■■■■□ 3.18
SPOCK3-208ENST00000505187 RAD54L2Q9Y4B4 1467 aa34.88■■■■□ 3.17
SPOCK3-208ENST00000505187 TARBP1Q13395 1621 aaKnown RBP34.86■■■■□ 3.17
SPOCK3-208ENST00000505187 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
SPOCK3-208ENST00000505187 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
SPOCK3-208ENST00000505187 CUX2O14529 1486 aa34.85■■■■□ 3.17
SPOCK3-208ENST00000505187 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
SPOCK3-208ENST00000505187 FAM9AQ8IZU1 332 aaPredicted RBP34.79■■■■□ 3.16
SPOCK3-208ENST00000505187 CSRNP3Q8WYN3 585 aa34.71■■■■□ 3.15
SPOCK3-208ENST00000505187 ABCA5Q8WWZ7 1642 aa34.69■■■■□ 3.14
SPOCK3-208ENST00000505187 KIF21BO75037 1637 aa34.58■■■■□ 3.13
SPOCK3-208ENST00000505187 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
SPOCK3-208ENST00000505187 TDRD9Q8NDG6 1382 aaKnown RBP34.57■■■■□ 3.12
SPOCK3-208ENST00000505187 ERICH3Q5RHP9 1530 aa34.53■■■■□ 3.12
SPOCK3-208ENST00000505187 IGF1RP08069 1367 aa34.53■■■■□ 3.12
SPOCK3-208ENST00000505187 PBRM1Q86U86 1689 aa34.51■■■■□ 3.11
SPOCK3-208ENST00000505187 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
SPOCK3-208ENST00000505187 PRXQ9BXM0 1461 aa34.49■■■■□ 3.11
SPOCK3-208ENST00000505187 EIF4G3O43432 1585 aaKnown RBP34.48■■■■□ 3.11
SPOCK3-208ENST00000505187 CUL7Q14999 1698 aa34.48■■■■□ 3.11
SPOCK3-208ENST00000505187 AQRO60306 1485 aaKnown RBP eCLIP34.45■■■■□ 3.11
SPOCK3-208ENST00000505187 GOLGA3Q08378 1498 aa34.43■■■■□ 3.1
SPOCK3-208ENST00000505187 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
SPOCK3-208ENST00000505187 LOC105371045A0A1W2PR82 267 aa34.4■■■■□ 3.1
SPOCK3-208ENST00000505187 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
SPOCK3-208ENST00000505187 RAPGEF2Q9Y4G8 1499 aa34.32■■■■□ 3.09
SPOCK3-208ENST00000505187 ADAMTS12P58397 1594 aa34.27■■■■□ 3.08
SPOCK3-208ENST00000505187 MAGI1Q96QZ7 1491 aaPredicted RBP34.23■■■■□ 3.07
SPOCK3-208ENST00000505187 FHAD1B1AJZ9 1412 aa34.22■■■■□ 3.07
SPOCK3-208ENST00000505187 TNIKQ9UKE5 1360 aa34.21■■■■□ 3.07
SPOCK3-208ENST00000505187 SNAPC4Q5SXM2 1469 aa34.19■■■■□ 3.06
SPOCK3-208ENST00000505187 EHMT2Q96KQ7 1210 aa34.18■■■■□ 3.06
SPOCK3-208ENST00000505187 UBTFP17480 764 aaKnown RBP34.15■■■■□ 3.06
SPOCK3-208ENST00000505187 SYNJ2O15056 1496 aa34.06■■■■□ 3.04
SPOCK3-208ENST00000505187 CTTNBP2Q8WZ74 1663 aa34.02■■■■□ 3.04
SPOCK3-208ENST00000505187 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
SPOCK3-208ENST00000505187 CEP162Q5TB80 1403 aa33.93■■■■□ 3.02
SPOCK3-208ENST00000505187 CHMP7Q8WUX9 453 aaPredicted RBP33.89■■■■□ 3.02
SPOCK3-208ENST00000505187 CHD1O14646 1710 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms