RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-208ENST00000504880 NISCHQ9Y2I1 1504 aa50.34■■■■■ 5.65
SLC38A9-208ENST00000504880 CCDC180Q9P1Z9 1646 aa43.54■■■■■ 4.56
SLC38A9-208ENST00000504880 ZCCHC6Q5VYS8 1495 aaKnown RBP42.41■■■■■ 4.38
SLC38A9-208ENST00000504880 SHROOM4Q9ULL8 1493 aa41.71■■■■■ 4.27
SLC38A9-208ENST00000504880 DCAF8L2P0C7V8 631 aa41.55■■■■■ 4.24
SLC38A9-208ENST00000504880 DCAF1Q9Y4B6 1507 aa41.45■■■■■ 4.23
SLC38A9-208ENST00000504880 ABCC9O60706 1549 aa41.01■■■■■ 4.16
SLC38A9-208ENST00000504880 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
SLC38A9-208ENST00000504880 NACADO15069 1562 aa40.42■■■■■ 4.06
SLC38A9-208ENST00000504880 SCRIBQ14160 1630 aa40.39■■■■■ 4.06
SLC38A9-208ENST00000504880 SUPT5HO00267 1087 aaKnown RBP40.27■■■■■ 4.04
SLC38A9-208ENST00000504880 RB1CC1Q8TDY2 1594 aa39.99■■■■□ 3.99
SLC38A9-208ENST00000504880 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
SLC38A9-208ENST00000504880 RSF1Q96T23 1441 aaPredicted RBP39.31■■■■□ 3.88
SLC38A9-208ENST00000504880 CECR2Q9BXF3 1484 aa39.26■■■■□ 3.87
SLC38A9-208ENST00000504880 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
SLC38A9-208ENST00000504880 BICRAQ9NZM4 1560 aa38.98■■■■□ 3.83
SLC38A9-208ENST00000504880 CHIC1Q5VXU3 224 aa38.87■■■■□ 3.81
SLC38A9-208ENST00000504880 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
SLC38A9-208ENST00000504880 WIZO95785 1651 aa38.78■■■■□ 3.8
SLC38A9-208ENST00000504880 BAZ1AQ9NRL2 1556 aaPredicted RBP38.77■■■■□ 3.8
SLC38A9-208ENST00000504880 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
SLC38A9-208ENST00000504880 TOP2AP11388 1531 aaKnown RBP38.23■■■■□ 3.71
SLC38A9-208ENST00000504880 PEG3Q9GZU2 1588 aa38.03■■■■□ 3.68
SLC38A9-208ENST00000504880 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
SLC38A9-208ENST00000504880 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
SLC38A9-208ENST00000504880 CCDC88BA6NC98 1476 aa37.92■■■■□ 3.66
SLC38A9-208ENST00000504880 ATAD2BQ9ULI0 1458 aa37.86■■■■□ 3.65
SLC38A9-208ENST00000504880 TRIM41Q8WV44 630 aa37.66■■■■□ 3.62
SLC38A9-208ENST00000504880 BAZ1BQ9UIG0 1483 aaKnown RBP37.65■■■■□ 3.62
SLC38A9-208ENST00000504880 LOC105371045A0A1W2PR82 267 aa37.56■■■■□ 3.6
SLC38A9-208ENST00000504880 ABCC8Q09428 1581 aa37.43■■■■□ 3.58
SLC38A9-208ENST00000504880 NCAPD3P42695 1498 aa37.35■■■■□ 3.57
SLC38A9-208ENST00000504880 HMGXB3Q12766 1538 aa37.34■■■■□ 3.57
SLC38A9-208ENST00000504880 FAM9AQ8IZU1 332 aaPredicted RBP37.2■■■■□ 3.55
SLC38A9-208ENST00000504880 CC2D2AQ9P2K1 1620 aa37.06■■■■□ 3.52
SLC38A9-208ENST00000504880 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.5
SLC38A9-208ENST00000504880 SYNJ1O43426 1573 aa36.9■■■■□ 3.5
SLC38A9-208ENST00000504880 EHMT2Q96KQ7 1210 aa36.82■■■■□ 3.48
SLC38A9-208ENST00000504880 SOGA1O94964 1423 aa36.78■■■■□ 3.48
SLC38A9-208ENST00000504880 CFTRP13569 1480 aa36.71■■■■□ 3.47
SLC38A9-208ENST00000504880 RUSC2Q8N2Y8 1516 aa36.69■■■■□ 3.46
SLC38A9-208ENST00000504880 PCGF6Q9BYE7 350 aa36.68■■■■□ 3.46
SLC38A9-208ENST00000504880 TOP2BQ02880 1626 aa36.57■■■■□ 3.45
SLC38A9-208ENST00000504880 PRDM2Q13029 1718 aa36.54■■■■□ 3.44
SLC38A9-208ENST00000504880 BIVM-ERCC5R4GMW8 1640 aa36.52■■■■□ 3.44
SLC38A9-208ENST00000504880 EEA1Q15075 1411 aa36.48■■■■□ 3.43
SLC38A9-208ENST00000504880 CADPSQ9ULU8 1353 aa36.46■■■■□ 3.43
SLC38A9-208ENST00000504880 CUX1P39880 1505 aa36.45■■■■□ 3.43
SLC38A9-208ENST00000504880 CSRNP3Q8WYN3 585 aa36.37■■■■□ 3.41
SLC38A9-208ENST00000504880 TRIM26Q12899 539 aaPredicted RBP36.31■■■■□ 3.4
SLC38A9-208ENST00000504880 DNAJC5BQ9UF47 199 aa36.26■■■■□ 3.4
SLC38A9-208ENST00000504880 NESP48681 1621 aa36.22■■■■□ 3.39
SLC38A9-208ENST00000504880 HRCP23327 699 aa36.2■■■■□ 3.39
SLC38A9-208ENST00000504880 GOLGA3Q08378 1498 aa36.15■■■■□ 3.38
SLC38A9-208ENST00000504880 KIF21BO75037 1637 aa36.13■■■■□ 3.37
SLC38A9-208ENST00000504880 FANCD2Q9BXW9 1451 aa36.13■■■■□ 3.37
SLC38A9-208ENST00000504880 TNIKQ9UKE5 1360 aa36.1■■■■□ 3.37
SLC38A9-208ENST00000504880 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
SLC38A9-208ENST00000504880 CEP162Q5TB80 1403 aa36.07■■■■□ 3.36
SLC38A9-208ENST00000504880 UBTFP17480 764 aaKnown RBP36■■■■□ 3.35
SLC38A9-208ENST00000504880 LAMC3Q9Y6N6 1575 aa35.98■■■■□ 3.35
SLC38A9-208ENST00000504880 RAPGEF2Q9Y4G8 1499 aa35.98■■■■□ 3.35
SLC38A9-208ENST00000504880 FGD5Q6ZNL6 1462 aa35.95■■■■□ 3.35
SLC38A9-208ENST00000504880 KIF27Q86VH2 1401 aa35.88■■■■□ 3.33
SLC38A9-208ENST00000504880 DNMBPQ6XZF7 1577 aa35.85■■■■□ 3.33
SLC38A9-208ENST00000504880 PRXQ9BXM0 1461 aa35.84■■■■□ 3.33
SLC38A9-208ENST00000504880 PPARGC1BQ86YN6 1023 aaKnown RBP35.81■■■■□ 3.32
SLC38A9-208ENST00000504880 TOPBP1Q92547 1522 aa35.81■■■■□ 3.32
SLC38A9-208ENST00000504880 CUX2O14529 1486 aa35.79■■■■□ 3.32
SLC38A9-208ENST00000504880 ERICH3Q5RHP9 1530 aa35.75■■■■□ 3.31
SLC38A9-208ENST00000504880 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
SLC38A9-208ENST00000504880 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
SLC38A9-208ENST00000504880 POLA1P09884 1462 aaPredicted RBP35.7■■■■□ 3.31
SLC38A9-208ENST00000504880 RAD54L2Q9Y4B4 1467 aa35.67■■■■□ 3.3
SLC38A9-208ENST00000504880 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
SLC38A9-208ENST00000504880 CLIP1P30622 1438 aa35.63■■■■□ 3.29
SLC38A9-208ENST00000504880 IGF1RP08069 1367 aa35.59■■■■□ 3.29
SLC38A9-208ENST00000504880 ABCA10Q8WWZ4 1543 aa35.55■■■■□ 3.28
SLC38A9-208ENST00000504880 RANGAP1P46060 587 aaPredicted RBP35.5■■■■□ 3.27
SLC38A9-208ENST00000504880 WDR97A6NE52 1622 aa35.48■■■■□ 3.27
SLC38A9-208ENST00000504880 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
SLC38A9-208ENST00000504880 TTBK1Q5TCY1 1321 aaPredicted RBP35.37■■■■□ 3.25
SLC38A9-208ENST00000504880 VPS8Q8N3P4 1428 aa35.37■■■■□ 3.25
SLC38A9-208ENST00000504880 ARAP1Q96P48 1450 aa35.32■■■■□ 3.24
SLC38A9-208ENST00000504880 ABCA5Q8WWZ7 1642 aa35.29■■■■□ 3.24
SLC38A9-208ENST00000504880 MRC2Q9UBG0 1479 aa35.26■■■■□ 3.24
SLC38A9-208ENST00000504880 TARBP1Q13395 1621 aaKnown RBP35.25■■■■□ 3.23
SLC38A9-208ENST00000504880 TDRD9Q8NDG6 1382 aaKnown RBP35.24■■■■□ 3.23
SLC38A9-208ENST00000504880 CUL7Q14999 1698 aa35.19■■■■□ 3.22
SLC38A9-208ENST00000504880 ARHGAP35Q9NRY4 1499 aa35.19■■■■□ 3.22
SLC38A9-208ENST00000504880 ZEB1P37275 1124 aaPredicted RBP35.16■■■■□ 3.22
SLC38A9-208ENST00000504880 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
SLC38A9-208ENST00000504880 WDR62O43379 1518 aa35.08■■■■□ 3.21
SLC38A9-208ENST00000504880 APLP2Q06481 763 aa34.98■■■■□ 3.19
SLC38A9-208ENST00000504880 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
SLC38A9-208ENST00000504880 PBRM1Q86U86 1689 aa34.97■■■■□ 3.19
SLC38A9-208ENST00000504880 CTTNBP2Q8WZ74 1663 aa34.96■■■■□ 3.19
SLC38A9-208ENST00000504880 THOC2Q8NI27 1593 aaKnown RBP34.95■■■■□ 3.19
SLC38A9-208ENST00000504880 AQRO60306 1485 aaKnown RBP eCLIP34.95■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms