RNA–Protein interactions for RNA: ENST00000504692.1

LEMD2-205, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-205ENST00000504692 NISCHQ9Y2I1 1504 aa40.86■■■■■ 4.13
LEMD2-205ENST00000504692 ABCC9O60706 1549 aa36.8■■■■□ 3.48
LEMD2-205ENST00000504692 CCDC180Q9P1Z9 1646 aa36.77■■■■□ 3.48
LEMD2-205ENST00000504692 RB1CC1Q8TDY2 1594 aa35.07■■■■□ 3.2
LEMD2-205ENST00000504692 NACADO15069 1562 aa34.82■■■■□ 3.16
LEMD2-205ENST00000504692 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
LEMD2-205ENST00000504692 DCAF8L2P0C7V8 631 aa34.48■■■■□ 3.11
LEMD2-205ENST00000504692 MYO15BQ96JP2 1530 aa34.34■■■■□ 3.09
LEMD2-205ENST00000504692 PABPN1Q86U42 306 aaKnown RBP eCLIP34.21■■■■□ 3.07
LEMD2-205ENST00000504692 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
LEMD2-205ENST00000504692 BICRAQ9NZM4 1560 aa33.97■■■■□ 3.03
LEMD2-205ENST00000504692 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
LEMD2-205ENST00000504692 DCAF1Q9Y4B6 1507 aa33.82■■■■□ 3
LEMD2-205ENST00000504692 SHROOM4Q9ULL8 1493 aa33.68■■■□□ 2.98
LEMD2-205ENST00000504692 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
LEMD2-205ENST00000504692 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
LEMD2-205ENST00000504692 CECR2Q9BXF3 1484 aa33.22■■■□□ 2.91
LEMD2-205ENST00000504692 EIF4G1Q04637 1599 aaKnown RBP33.18■■■□□ 2.9
LEMD2-205ENST00000504692 NCAPD3P42695 1498 aa32.13■■■□□ 2.73
LEMD2-205ENST00000504692 DNAJC5Q9H3Z4 198 aa31.98■■■□□ 2.71
LEMD2-205ENST00000504692 ATAD2BQ9ULI0 1458 aa31.97■■■□□ 2.71
LEMD2-205ENST00000504692 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
LEMD2-205ENST00000504692 CUX2O14529 1486 aa31.89■■■□□ 2.7
LEMD2-205ENST00000504692 SMARCA4P51532 1647 aa31.89■■■□□ 2.7
LEMD2-205ENST00000504692 HMGXB3Q12766 1538 aa31.88■■■□□ 2.69
LEMD2-205ENST00000504692 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
LEMD2-205ENST00000504692 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
LEMD2-205ENST00000504692 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
LEMD2-205ENST00000504692 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
LEMD2-205ENST00000504692 NESP48681 1621 aa31.55■■■□□ 2.64
LEMD2-205ENST00000504692 MROH2BQ7Z745 1585 aa31.43■■■□□ 2.62
LEMD2-205ENST00000504692 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
LEMD2-205ENST00000504692 THOC2Q8NI27 1593 aaKnown RBP31.31■■■□□ 2.6
LEMD2-205ENST00000504692 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
LEMD2-205ENST00000504692 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
LEMD2-205ENST00000504692 CADPSQ9ULU8 1353 aa31.13■■■□□ 2.57
LEMD2-205ENST00000504692 WIZO95785 1651 aa31.03■■■□□ 2.56
LEMD2-205ENST00000504692 MRC2Q9UBG0 1479 aa30.97■■■□□ 2.55
LEMD2-205ENST00000504692 WDR62O43379 1518 aa30.89■■■□□ 2.54
LEMD2-205ENST00000504692 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
LEMD2-205ENST00000504692 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
LEMD2-205ENST00000504692 RSF1Q96T23 1441 aaPredicted RBP30.75■■■□□ 2.51
LEMD2-205ENST00000504692 CFTRP13569 1480 aa30.75■■■□□ 2.51
LEMD2-205ENST00000504692 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
LEMD2-205ENST00000504692 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
LEMD2-205ENST00000504692 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
LEMD2-205ENST00000504692 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
LEMD2-205ENST00000504692 OSCARQ8IYS5 282 aa30.39■■■□□ 2.46
LEMD2-205ENST00000504692 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
LEMD2-205ENST00000504692 IFT140Q96RY7 1462 aa30.23■■■□□ 2.43
LEMD2-205ENST00000504692 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
LEMD2-205ENST00000504692 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
LEMD2-205ENST00000504692 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
LEMD2-205ENST00000504692 ZNF608Q9ULD9 1512 aaPredicted RBP30.1■■■□□ 2.41
LEMD2-205ENST00000504692 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
LEMD2-205ENST00000504692 EIF4G3O43432 1585 aaKnown RBP29.96■■■□□ 2.39
LEMD2-205ENST00000504692 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
LEMD2-205ENST00000504692 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
LEMD2-205ENST00000504692 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
LEMD2-205ENST00000504692 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
LEMD2-205ENST00000504692 ARHGEF11O15085 1522 aa29.86■■■□□ 2.37
LEMD2-205ENST00000504692 POLA1P09884 1462 aaPredicted RBP29.83■■■□□ 2.37
LEMD2-205ENST00000504692 AQRO60306 1485 aaKnown RBP eCLIP29.82■■■□□ 2.36
LEMD2-205ENST00000504692 CHD1O14646 1710 aa29.74■■■□□ 2.35
LEMD2-205ENST00000504692 SOGA1O94964 1423 aa29.71■■■□□ 2.35
LEMD2-205ENST00000504692 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
LEMD2-205ENST00000504692 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
LEMD2-205ENST00000504692 FBLN2P98095 1184 aa29.66■■■□□ 2.34
LEMD2-205ENST00000504692 CYB5RLQ6IPT4 315 aa29.62■■■□□ 2.33
LEMD2-205ENST00000504692 TDRD9Q8NDG6 1382 aaKnown RBP29.62■■■□□ 2.33
LEMD2-205ENST00000504692 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
LEMD2-205ENST00000504692 CUX1P39880 1505 aa29.55■■■□□ 2.32
LEMD2-205ENST00000504692 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
LEMD2-205ENST00000504692 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
LEMD2-205ENST00000504692 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
LEMD2-205ENST00000504692 GRIN2BQ13224 1484 aa29.48■■■□□ 2.31
LEMD2-205ENST00000504692 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
LEMD2-205ENST00000504692 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
LEMD2-205ENST00000504692 CLASP1Q7Z460 1538 aa29.44■■■□□ 2.3
LEMD2-205ENST00000504692 SYNJ2O15056 1496 aa29.41■■■□□ 2.3
LEMD2-205ENST00000504692 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
LEMD2-205ENST00000504692 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
LEMD2-205ENST00000504692 ABCA10Q8WWZ4 1543 aa29.31■■■□□ 2.28
LEMD2-205ENST00000504692 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
LEMD2-205ENST00000504692 ABCA5Q8WWZ7 1642 aa29.25■■■□□ 2.27
LEMD2-205ENST00000504692 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
LEMD2-205ENST00000504692 GRIN2AQ12879 1464 aa29.09■■■□□ 2.25
LEMD2-205ENST00000504692 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
LEMD2-205ENST00000504692 BIVM-ERCC5R4GMW8 1640 aa29.07■■■□□ 2.24
LEMD2-205ENST00000504692 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
LEMD2-205ENST00000504692 NUP160Q12769 1436 aa29.01■■■□□ 2.23
LEMD2-205ENST00000504692 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
LEMD2-205ENST00000504692 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
LEMD2-205ENST00000504692 CEP170Q5SW79 1584 aa28.95■■■□□ 2.22
LEMD2-205ENST00000504692 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
LEMD2-205ENST00000504692 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
LEMD2-205ENST00000504692 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
LEMD2-205ENST00000504692 PRG4Q92954 1404 aaPredicted RBP28.72■■■□□ 2.19
LEMD2-205ENST00000504692 JPH4Q96JJ6 628 aa28.69■■■□□ 2.18
LEMD2-205ENST00000504692 AEBP2Q6ZN18 517 aaPredicted RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms