RNA–Protein interactions for RNA: ENST00000504598.5

FAM200B-207, Transcript of family with sequence similarity 200 member B, humanhuman

TSL 4

Gene FAM200B, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200B-207ENST00000504598 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
FAM200B-207ENST00000504598 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
FAM200B-207ENST00000504598 ABCC9O60706 1549 aa29.72■■■□□ 2.35
FAM200B-207ENST00000504598 RB1CC1Q8TDY2 1594 aa28.58■■■□□ 2.17
FAM200B-207ENST00000504598 NACADO15069 1562 aa28.49■■■□□ 2.15
FAM200B-207ENST00000504598 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
FAM200B-207ENST00000504598 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
FAM200B-207ENST00000504598 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
FAM200B-207ENST00000504598 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
FAM200B-207ENST00000504598 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
FAM200B-207ENST00000504598 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.02
FAM200B-207ENST00000504598 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
FAM200B-207ENST00000504598 DNAJC5BQ9UF47 199 aa27.55■■■□□ 2
FAM200B-207ENST00000504598 SHROOM4Q9ULL8 1493 aa27.51■■■□□ 2
FAM200B-207ENST00000504598 SCRIBQ14160 1630 aa27.39■■□□□ 1.98
FAM200B-207ENST00000504598 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
FAM200B-207ENST00000504598 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
FAM200B-207ENST00000504598 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
FAM200B-207ENST00000504598 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
FAM200B-207ENST00000504598 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
FAM200B-207ENST00000504598 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
FAM200B-207ENST00000504598 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
FAM200B-207ENST00000504598 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
FAM200B-207ENST00000504598 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
FAM200B-207ENST00000504598 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
FAM200B-207ENST00000504598 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
FAM200B-207ENST00000504598 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
FAM200B-207ENST00000504598 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
FAM200B-207ENST00000504598 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
FAM200B-207ENST00000504598 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
FAM200B-207ENST00000504598 WIZO95785 1651 aa25.64■■□□□ 1.69
FAM200B-207ENST00000504598 CUX2O14529 1486 aa25.62■■□□□ 1.69
FAM200B-207ENST00000504598 NESP48681 1621 aa25.61■■□□□ 1.69
FAM200B-207ENST00000504598 RSF1Q96T23 1441 aaPredicted RBP25.56■■□□□ 1.68
FAM200B-207ENST00000504598 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
FAM200B-207ENST00000504598 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
FAM200B-207ENST00000504598 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
FAM200B-207ENST00000504598 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
FAM200B-207ENST00000504598 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
FAM200B-207ENST00000504598 CFTRP13569 1480 aa25.26■■□□□ 1.63
FAM200B-207ENST00000504598 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
FAM200B-207ENST00000504598 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
FAM200B-207ENST00000504598 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
FAM200B-207ENST00000504598 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
FAM200B-207ENST00000504598 WDR62O43379 1518 aa25.12■■□□□ 1.61
FAM200B-207ENST00000504598 CHIC1Q5VXU3 224 aa25.12■■□□□ 1.61
FAM200B-207ENST00000504598 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
FAM200B-207ENST00000504598 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
FAM200B-207ENST00000504598 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.57
FAM200B-207ENST00000504598 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
FAM200B-207ENST00000504598 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
FAM200B-207ENST00000504598 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
FAM200B-207ENST00000504598 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
FAM200B-207ENST00000504598 SUPT5HO00267 1087 aaKnown RBP24.59■■□□□ 1.53
FAM200B-207ENST00000504598 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
FAM200B-207ENST00000504598 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
FAM200B-207ENST00000504598 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
FAM200B-207ENST00000504598 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
FAM200B-207ENST00000504598 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
FAM200B-207ENST00000504598 SOGA1O94964 1423 aa24.37■■□□□ 1.49
FAM200B-207ENST00000504598 CUX1P39880 1505 aa24.37■■□□□ 1.49
FAM200B-207ENST00000504598 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
FAM200B-207ENST00000504598 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
FAM200B-207ENST00000504598 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
FAM200B-207ENST00000504598 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
FAM200B-207ENST00000504598 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
FAM200B-207ENST00000504598 CHD1O14646 1710 aa24.17■■□□□ 1.46
FAM200B-207ENST00000504598 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
FAM200B-207ENST00000504598 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
FAM200B-207ENST00000504598 MAGI1Q96QZ7 1491 aaPredicted RBP24.15■■□□□ 1.46
FAM200B-207ENST00000504598 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
FAM200B-207ENST00000504598 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
FAM200B-207ENST00000504598 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
FAM200B-207ENST00000504598 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
FAM200B-207ENST00000504598 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
FAM200B-207ENST00000504598 FBLN2P98095 1184 aa24.09■■□□□ 1.45
FAM200B-207ENST00000504598 TRIM41Q8WV44 630 aa24.09■■□□□ 1.45
FAM200B-207ENST00000504598 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
FAM200B-207ENST00000504598 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
FAM200B-207ENST00000504598 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
FAM200B-207ENST00000504598 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
FAM200B-207ENST00000504598 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
FAM200B-207ENST00000504598 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
FAM200B-207ENST00000504598 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
FAM200B-207ENST00000504598 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
FAM200B-207ENST00000504598 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
FAM200B-207ENST00000504598 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
FAM200B-207ENST00000504598 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
FAM200B-207ENST00000504598 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
FAM200B-207ENST00000504598 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
FAM200B-207ENST00000504598 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
FAM200B-207ENST00000504598 CYB5RLQ6IPT4 315 aa23.8■■□□□ 1.4
FAM200B-207ENST00000504598 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
FAM200B-207ENST00000504598 NUP160Q12769 1436 aa23.75■■□□□ 1.39
FAM200B-207ENST00000504598 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
FAM200B-207ENST00000504598 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
FAM200B-207ENST00000504598 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
FAM200B-207ENST00000504598 IGF1RP08069 1367 aa23.6■■□□□ 1.37
FAM200B-207ENST00000504598 CUL7Q14999 1698 aa23.6■■□□□ 1.37
FAM200B-207ENST00000504598 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms