RNA–Protein interactions for RNA: ENST00000504547.1

COPG1-203, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-203ENST00000504547 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
COPG1-203ENST00000504547 ABCC9O60706 1549 aa16.54■□□□□ 0.24
COPG1-203ENST00000504547 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
COPG1-203ENST00000504547 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
COPG1-203ENST00000504547 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
COPG1-203ENST00000504547 NACADO15069 1562 aa15.53■□□□□ 0.08
COPG1-203ENST00000504547 DNAJC5BQ9UF47 199 aa15.42■□□□□ 0.06
COPG1-203ENST00000504547 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
COPG1-203ENST00000504547 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
COPG1-203ENST00000504547 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
COPG1-203ENST00000504547 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
COPG1-203ENST00000504547 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
COPG1-203ENST00000504547 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
COPG1-203ENST00000504547 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
COPG1-203ENST00000504547 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
COPG1-203ENST00000504547 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
COPG1-203ENST00000504547 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
COPG1-203ENST00000504547 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
COPG1-203ENST00000504547 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
COPG1-203ENST00000504547 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
COPG1-203ENST00000504547 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
COPG1-203ENST00000504547 ATAD2BQ9ULI0 1458 aa14.3□□□□□ -0.12
COPG1-203ENST00000504547 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
COPG1-203ENST00000504547 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
COPG1-203ENST00000504547 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
COPG1-203ENST00000504547 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
COPG1-203ENST00000504547 NESP48681 1621 aa14.19□□□□□ -0.14
COPG1-203ENST00000504547 CUX2O14529 1486 aa14.17□□□□□ -0.14
COPG1-203ENST00000504547 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
COPG1-203ENST00000504547 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
COPG1-203ENST00000504547 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
COPG1-203ENST00000504547 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
COPG1-203ENST00000504547 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
COPG1-203ENST00000504547 WIZO95785 1651 aa14.03□□□□□ -0.16
COPG1-203ENST00000504547 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
COPG1-203ENST00000504547 PDS5BQ9NTI5 1447 aa13.96□□□□□ -0.18
COPG1-203ENST00000504547 CADPSQ9ULU8 1353 aa13.9□□□□□ -0.18
COPG1-203ENST00000504547 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
COPG1-203ENST00000504547 CEP164Q9UPV0 1460 aa13.83□□□□□ -0.2
COPG1-203ENST00000504547 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
COPG1-203ENST00000504547 WDR62O43379 1518 aa13.8□□□□□ -0.2
COPG1-203ENST00000504547 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
COPG1-203ENST00000504547 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
COPG1-203ENST00000504547 CFTRP13569 1480 aa13.73□□□□□ -0.21
COPG1-203ENST00000504547 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
COPG1-203ENST00000504547 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
COPG1-203ENST00000504547 URB2Q14146 1524 aaKnown RBP13.67□□□□□ -0.22
COPG1-203ENST00000504547 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
COPG1-203ENST00000504547 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
COPG1-203ENST00000504547 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
COPG1-203ENST00000504547 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
COPG1-203ENST00000504547 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
COPG1-203ENST00000504547 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
COPG1-203ENST00000504547 EIF4G3O43432 1585 aaKnown RBP13.48□□□□□ -0.25
COPG1-203ENST00000504547 DNMBPQ6XZF7 1577 aa13.48□□□□□ -0.25
COPG1-203ENST00000504547 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
COPG1-203ENST00000504547 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
COPG1-203ENST00000504547 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
COPG1-203ENST00000504547 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
COPG1-203ENST00000504547 CHD1O14646 1710 aa13.41□□□□□ -0.26
COPG1-203ENST00000504547 FBLN2P98095 1184 aa13.4□□□□□ -0.26
COPG1-203ENST00000504547 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.261e-7■■■■□ 21.6
COPG1-203ENST00000504547 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
COPG1-203ENST00000504547 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
COPG1-203ENST00000504547 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
COPG1-203ENST00000504547 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
COPG1-203ENST00000504547 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
COPG1-203ENST00000504547 SOGA1O94964 1423 aa13.33□□□□□ -0.28
COPG1-203ENST00000504547 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
COPG1-203ENST00000504547 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
COPG1-203ENST00000504547 CUX1P39880 1505 aa13.29□□□□□ -0.28
COPG1-203ENST00000504547 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
COPG1-203ENST00000504547 CYB5RLQ6IPT4 315 aa13.28□□□□□ -0.28
COPG1-203ENST00000504547 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
COPG1-203ENST00000504547 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
COPG1-203ENST00000504547 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
COPG1-203ENST00000504547 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
COPG1-203ENST00000504547 ARAP1Q96P48 1450 aa13.21□□□□□ -0.3
COPG1-203ENST00000504547 SYNJ1O43426 1573 aa13.2□□□□□ -0.3
COPG1-203ENST00000504547 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
COPG1-203ENST00000504547 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
COPG1-203ENST00000504547 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
COPG1-203ENST00000504547 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
COPG1-203ENST00000504547 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
COPG1-203ENST00000504547 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
COPG1-203ENST00000504547 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
COPG1-203ENST00000504547 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.315e-6■■■■■ 46
COPG1-203ENST00000504547 BIVM-ERCC5R4GMW8 1640 aa13.09□□□□□ -0.31
COPG1-203ENST00000504547 TOP2BQ02880 1626 aa13.08□□□□□ -0.32
COPG1-203ENST00000504547 ADAMTS12P58397 1594 aa13.06□□□□□ -0.32
COPG1-203ENST00000504547 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
COPG1-203ENST00000504547 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
COPG1-203ENST00000504547 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
COPG1-203ENST00000504547 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
COPG1-203ENST00000504547 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
COPG1-203ENST00000504547 NUP160Q12769 1436 aa12.96□□□□□ -0.34
COPG1-203ENST00000504547 SHROOM2Q13796 1616 aa12.91□□□□□ -0.34
COPG1-203ENST00000504547 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
COPG1-203ENST00000504547 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
COPG1-203ENST00000504547 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms