RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
NR1I3-219ENST00000504010 ABCC9O60706 1549 aa20.29■□□□□ 0.84
NR1I3-219ENST00000504010 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
NR1I3-219ENST00000504010 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
NR1I3-219ENST00000504010 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
NR1I3-219ENST00000504010 RB1CC1Q8TDY2 1594 aa19.19■□□□□ 0.66
NR1I3-219ENST00000504010 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
NR1I3-219ENST00000504010 NACADO15069 1562 aa18.95■□□□□ 0.62
NR1I3-219ENST00000504010 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
NR1I3-219ENST00000504010 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
NR1I3-219ENST00000504010 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
NR1I3-219ENST00000504010 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
NR1I3-219ENST00000504010 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
NR1I3-219ENST00000504010 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
NR1I3-219ENST00000504010 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
NR1I3-219ENST00000504010 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
NR1I3-219ENST00000504010 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
NR1I3-219ENST00000504010 EIF4G1Q04637 1599 aaKnown RBP18.2■□□□□ 0.5
NR1I3-219ENST00000504010 DCAF1Q9Y4B6 1507 aa18.11■□□□□ 0.49
NR1I3-219ENST00000504010 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
NR1I3-219ENST00000504010 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
NR1I3-219ENST00000504010 CUX2O14529 1486 aa17.82■□□□□ 0.44
NR1I3-219ENST00000504010 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
NR1I3-219ENST00000504010 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
NR1I3-219ENST00000504010 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
NR1I3-219ENST00000504010 HMGXB3Q12766 1538 aa17.31■□□□□ 0.36
NR1I3-219ENST00000504010 SMARCA2P51531 1590 aa17.29■□□□□ 0.36
NR1I3-219ENST00000504010 NESP48681 1621 aa17.26■□□□□ 0.35
NR1I3-219ENST00000504010 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
NR1I3-219ENST00000504010 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
NR1I3-219ENST00000504010 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
NR1I3-219ENST00000504010 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
NR1I3-219ENST00000504010 BAZ1BQ9UIG0 1483 aaKnown RBP17.12■□□□□ 0.33
NR1I3-219ENST00000504010 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
NR1I3-219ENST00000504010 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
NR1I3-219ENST00000504010 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
NR1I3-219ENST00000504010 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
NR1I3-219ENST00000504010 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
NR1I3-219ENST00000504010 WDR62O43379 1518 aa16.93■□□□□ 0.3
NR1I3-219ENST00000504010 CADPSQ9ULU8 1353 aa16.9■□□□□ 0.3
NR1I3-219ENST00000504010 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
NR1I3-219ENST00000504010 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
NR1I3-219ENST00000504010 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
NR1I3-219ENST00000504010 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
NR1I3-219ENST00000504010 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
NR1I3-219ENST00000504010 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
NR1I3-219ENST00000504010 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
NR1I3-219ENST00000504010 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
NR1I3-219ENST00000504010 CFTRP13569 1480 aa16.61■□□□□ 0.25
NR1I3-219ENST00000504010 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
NR1I3-219ENST00000504010 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
NR1I3-219ENST00000504010 WIZO95785 1651 aa16.55■□□□□ 0.24
NR1I3-219ENST00000504010 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
NR1I3-219ENST00000504010 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
NR1I3-219ENST00000504010 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
NR1I3-219ENST00000504010 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
NR1I3-219ENST00000504010 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
NR1I3-219ENST00000504010 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
NR1I3-219ENST00000504010 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
NR1I3-219ENST00000504010 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
NR1I3-219ENST00000504010 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
NR1I3-219ENST00000504010 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
NR1I3-219ENST00000504010 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
NR1I3-219ENST00000504010 CHD1O14646 1710 aa16.31■□□□□ 0.2
NR1I3-219ENST00000504010 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
NR1I3-219ENST00000504010 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
NR1I3-219ENST00000504010 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
NR1I3-219ENST00000504010 FBLN2P98095 1184 aa16.21■□□□□ 0.19
NR1I3-219ENST00000504010 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
NR1I3-219ENST00000504010 AQRO60306 1485 aaKnown RBP eCLIP16.21■□□□□ 0.19
NR1I3-219ENST00000504010 CCDC88BA6NC98 1476 aa16.15■□□□□ 0.18
NR1I3-219ENST00000504010 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.18
NR1I3-219ENST00000504010 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
NR1I3-219ENST00000504010 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
NR1I3-219ENST00000504010 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
NR1I3-219ENST00000504010 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
NR1I3-219ENST00000504010 SNAPC4Q5SXM2 1469 aa16.05■□□□□ 0.16
NR1I3-219ENST00000504010 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
NR1I3-219ENST00000504010 SOGA1O94964 1423 aa16.03■□□□□ 0.16
NR1I3-219ENST00000504010 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
NR1I3-219ENST00000504010 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
NR1I3-219ENST00000504010 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
NR1I3-219ENST00000504010 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
NR1I3-219ENST00000504010 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
NR1I3-219ENST00000504010 FGD5Q6ZNL6 1462 aa15.92■□□□□ 0.14
NR1I3-219ENST00000504010 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
NR1I3-219ENST00000504010 CUX1P39880 1505 aa15.82■□□□□ 0.12
NR1I3-219ENST00000504010 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
NR1I3-219ENST00000504010 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
NR1I3-219ENST00000504010 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
NR1I3-219ENST00000504010 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
NR1I3-219ENST00000504010 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
NR1I3-219ENST00000504010 ABCA10Q8WWZ4 1543 aa15.75■□□□□ 0.11
NR1I3-219ENST00000504010 NUP160Q12769 1436 aa15.74■□□□□ 0.11
NR1I3-219ENST00000504010 SHROOM2Q13796 1616 aa15.73■□□□□ 0.11
NR1I3-219ENST00000504010 ILDR1Q86SU0 546 aaPredicted RBP15.71■□□□□ 0.11
NR1I3-219ENST00000504010 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
NR1I3-219ENST00000504010 ABCC10Q5T3U5 1492 aa15.67■□□□□ 0.1
NR1I3-219ENST00000504010 KDM4FA0A1W2PPD8 638 aa15.65■□□□□ 0.1
NR1I3-219ENST00000504010 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms