RNA–Protein interactions for RNA: ENST00000503958.1

CDH10-203, Transcript of cadherin 10, humanhuman

TSL 2

Gene CDH10, Length 1,021 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH10-203ENST00000503958 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
CDH10-203ENST00000503958 ABCC9O60706 1549 aa27.04■■□□□ 1.92
CDH10-203ENST00000503958 CCDC180Q9P1Z9 1646 aa26.52■■□□□ 1.84
CDH10-203ENST00000503958 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
CDH10-203ENST00000503958 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
CDH10-203ENST00000503958 NACADO15069 1562 aa25.2■■□□□ 1.62
CDH10-203ENST00000503958 PABPN1Q86U42 306 aaKnown RBP eCLIP25.09■■□□□ 1.61
CDH10-203ENST00000503958 UNC13AQ9UPW8 1703 aa25■■□□□ 1.59
CDH10-203ENST00000503958 DCAF8L2P0C7V8 631 aa24.87■■□□□ 1.57
CDH10-203ENST00000503958 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
CDH10-203ENST00000503958 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
CDH10-203ENST00000503958 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
CDH10-203ENST00000503958 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
CDH10-203ENST00000503958 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
CDH10-203ENST00000503958 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
CDH10-203ENST00000503958 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
CDH10-203ENST00000503958 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
CDH10-203ENST00000503958 ZCCHC6Q5VYS8 1495 aaKnown RBP24.18■■□□□ 1.46
CDH10-203ENST00000503958 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
CDH10-203ENST00000503958 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
CDH10-203ENST00000503958 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
CDH10-203ENST00000503958 CUX2O14529 1486 aa23.52■■□□□ 1.36
CDH10-203ENST00000503958 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
CDH10-203ENST00000503958 NCAPD3P42695 1498 aa23.3■■□□□ 1.32
CDH10-203ENST00000503958 ATAD2BQ9ULI0 1458 aa23.15■■□□□ 1.3
CDH10-203ENST00000503958 NESP48681 1621 aa23.11■■□□□ 1.29
CDH10-203ENST00000503958 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
CDH10-203ENST00000503958 SMARCA2P51531 1590 aa23.01■■□□□ 1.27
CDH10-203ENST00000503958 THOC2Q8NI27 1593 aaKnown RBP22.99■■□□□ 1.27
CDH10-203ENST00000503958 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
CDH10-203ENST00000503958 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
CDH10-203ENST00000503958 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
CDH10-203ENST00000503958 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
CDH10-203ENST00000503958 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
CDH10-203ENST00000503958 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
CDH10-203ENST00000503958 BAZ1AQ9NRL2 1556 aaPredicted RBP22.75■■□□□ 1.23
CDH10-203ENST00000503958 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
CDH10-203ENST00000503958 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
CDH10-203ENST00000503958 CADPSQ9ULU8 1353 aa22.54■■□□□ 1.2
CDH10-203ENST00000503958 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
CDH10-203ENST00000503958 WDR62O43379 1518 aa22.53■■□□□ 1.2
CDH10-203ENST00000503958 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
CDH10-203ENST00000503958 CEP164Q9UPV0 1460 aa22.32■■□□□ 1.16
CDH10-203ENST00000503958 WIZO95785 1651 aa22.3■■□□□ 1.16
CDH10-203ENST00000503958 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
CDH10-203ENST00000503958 CFTRP13569 1480 aa22.19■■□□□ 1.14
CDH10-203ENST00000503958 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
CDH10-203ENST00000503958 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
CDH10-203ENST00000503958 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
CDH10-203ENST00000503958 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
CDH10-203ENST00000503958 ARHGEF11O15085 1522 aa22.01■■□□□ 1.11
CDH10-203ENST00000503958 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
CDH10-203ENST00000503958 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
CDH10-203ENST00000503958 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
CDH10-203ENST00000503958 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
CDH10-203ENST00000503958 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
CDH10-203ENST00000503958 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
CDH10-203ENST00000503958 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
CDH10-203ENST00000503958 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
CDH10-203ENST00000503958 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
CDH10-203ENST00000503958 CHD1O14646 1710 aa21.75■■□□□ 1.07
CDH10-203ENST00000503958 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
CDH10-203ENST00000503958 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
CDH10-203ENST00000503958 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.06
CDH10-203ENST00000503958 TARBP1Q13395 1621 aaKnown RBP21.69■■□□□ 1.06
CDH10-203ENST00000503958 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
CDH10-203ENST00000503958 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
CDH10-203ENST00000503958 FBLN2P98095 1184 aa21.57■■□□□ 1.04
CDH10-203ENST00000503958 POLA1P09884 1462 aaPredicted RBP21.55■■□□□ 1.04
CDH10-203ENST00000503958 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
CDH10-203ENST00000503958 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
CDH10-203ENST00000503958 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
CDH10-203ENST00000503958 SNAPC4Q5SXM2 1469 aa21.43■■□□□ 1.02
CDH10-203ENST00000503958 SOGA1O94964 1423 aa21.42■■□□□ 1.02
CDH10-203ENST00000503958 WDR97A6NE52 1622 aa21.38■■□□□ 1.01
CDH10-203ENST00000503958 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
CDH10-203ENST00000503958 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
CDH10-203ENST00000503958 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
CDH10-203ENST00000503958 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
CDH10-203ENST00000503958 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
CDH10-203ENST00000503958 SYNJ2O15056 1496 aa21.29■■□□□ 1
CDH10-203ENST00000503958 GRIN2BQ13224 1484 aa21.29■■□□□ 1
CDH10-203ENST00000503958 GAPVD1Q14C86 1478 aa21.27■■□□□ 1
CDH10-203ENST00000503958 CUX1P39880 1505 aa21.25■□□□□ 0.99
CDH10-203ENST00000503958 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
CDH10-203ENST00000503958 ERCC6L2Q5T890 1561 aa21.16■□□□□ 0.98
CDH10-203ENST00000503958 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
CDH10-203ENST00000503958 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
CDH10-203ENST00000503958 CEP170Q5SW79 1584 aa21.03■□□□□ 0.96
CDH10-203ENST00000503958 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
CDH10-203ENST00000503958 KIF13AQ9H1H9 1805 aa21.03■□□□□ 0.96
CDH10-203ENST00000503958 NUP160Q12769 1436 aa21.01■□□□□ 0.95
CDH10-203ENST00000503958 SHROOM2Q13796 1616 aa21■□□□□ 0.95
CDH10-203ENST00000503958 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
CDH10-203ENST00000503958 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
CDH10-203ENST00000503958 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
CDH10-203ENST00000503958 PRG4Q92954 1404 aaPredicted RBP20.81■□□□□ 0.92
CDH10-203ENST00000503958 ABCC10Q5T3U5 1492 aa20.81■□□□□ 0.92
CDH10-203ENST00000503958 KDM4FA0A1W2PPD8 638 aa20.79■□□□□ 0.92
CDH10-203ENST00000503958 FAM69CQ0P6D2 419 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms