RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 NISCHQ9Y2I1 1504 aa25.16■■□□□ 1.62
COPS4-202ENST00000503682 CCDC180Q9P1Z9 1646 aa22.43■■□□□ 1.18
COPS4-202ENST00000503682 ABCC9O60706 1549 aa22.29■■□□□ 1.16
COPS4-202ENST00000503682 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
COPS4-202ENST00000503682 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
COPS4-202ENST00000503682 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
COPS4-202ENST00000503682 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
COPS4-202ENST00000503682 NACADO15069 1562 aa21.13■□□□□ 0.97
COPS4-202ENST00000503682 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
COPS4-202ENST00000503682 ZCCHC6Q5VYS8 1495 aaKnown RBP20.89■□□□□ 0.94
COPS4-202ENST00000503682 MYO15BQ96JP2 1530 aa20.84■□□□□ 0.93
COPS4-202ENST00000503682 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
COPS4-202ENST00000503682 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
COPS4-202ENST00000503682 DCAF1Q9Y4B6 1507 aa20.71■□□□□ 0.91
COPS4-202ENST00000503682 BICRAQ9NZM4 1560 aa20.67■□□□□ 0.9
COPS4-202ENST00000503682 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
COPS4-202ENST00000503682 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
COPS4-202ENST00000503682 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
COPS4-202ENST00000503682 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
COPS4-202ENST00000503682 CECR2Q9BXF3 1484 aa20■□□□□ 0.79
COPS4-202ENST00000503682 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
COPS4-202ENST00000503682 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
COPS4-202ENST00000503682 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
COPS4-202ENST00000503682 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
COPS4-202ENST00000503682 SMARCA2P51531 1590 aa19.45■□□□□ 0.7
COPS4-202ENST00000503682 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
COPS4-202ENST00000503682 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
COPS4-202ENST00000503682 PHF23Q9BUL5 403 aaPredicted RBP19.36■□□□□ 0.69
COPS4-202ENST00000503682 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
COPS4-202ENST00000503682 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
COPS4-202ENST00000503682 WIZO95785 1651 aa19.26■□□□□ 0.67
COPS4-202ENST00000503682 NESP48681 1621 aa19.24■□□□□ 0.67
COPS4-202ENST00000503682 ERCC6Q03468 1493 aa19.17■□□□□ 0.66
COPS4-202ENST00000503682 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
COPS4-202ENST00000503682 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
COPS4-202ENST00000503682 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
COPS4-202ENST00000503682 CUX2O14529 1486 aa18.98■□□□□ 0.63
COPS4-202ENST00000503682 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
COPS4-202ENST00000503682 TOP2AP11388 1531 aaKnown RBP18.94■□□□□ 0.62
COPS4-202ENST00000503682 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
COPS4-202ENST00000503682 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
COPS4-202ENST00000503682 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
COPS4-202ENST00000503682 CFTRP13569 1480 aa18.78■□□□□ 0.6
COPS4-202ENST00000503682 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
COPS4-202ENST00000503682 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
COPS4-202ENST00000503682 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
COPS4-202ENST00000503682 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
COPS4-202ENST00000503682 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
COPS4-202ENST00000503682 WDR62O43379 1518 aa18.7■□□□□ 0.58
COPS4-202ENST00000503682 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
COPS4-202ENST00000503682 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
COPS4-202ENST00000503682 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
COPS4-202ENST00000503682 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
COPS4-202ENST00000503682 DNMBPQ6XZF7 1577 aa18.38■□□□□ 0.53
COPS4-202ENST00000503682 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
COPS4-202ENST00000503682 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
COPS4-202ENST00000503682 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
COPS4-202ENST00000503682 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
COPS4-202ENST00000503682 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.51
COPS4-202ENST00000503682 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
COPS4-202ENST00000503682 RAD54L2Q9Y4B4 1467 aa18.25■□□□□ 0.51
COPS4-202ENST00000503682 CUX1P39880 1505 aa18.24■□□□□ 0.51
COPS4-202ENST00000503682 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
COPS4-202ENST00000503682 FGD5Q6ZNL6 1462 aa18.2■□□□□ 0.5
COPS4-202ENST00000503682 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
COPS4-202ENST00000503682 SOGA1O94964 1423 aa18.18■□□□□ 0.5
COPS4-202ENST00000503682 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
COPS4-202ENST00000503682 CHD1O14646 1710 aa18.12■□□□□ 0.49
COPS4-202ENST00000503682 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
COPS4-202ENST00000503682 FBLN2P98095 1184 aa18.08■□□□□ 0.48
COPS4-202ENST00000503682 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
COPS4-202ENST00000503682 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
COPS4-202ENST00000503682 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
COPS4-202ENST00000503682 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
COPS4-202ENST00000503682 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
COPS4-202ENST00000503682 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
COPS4-202ENST00000503682 PBRM1Q86U86 1689 aa18■□□□□ 0.47
COPS4-202ENST00000503682 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
COPS4-202ENST00000503682 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
COPS4-202ENST00000503682 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
COPS4-202ENST00000503682 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
COPS4-202ENST00000503682 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
COPS4-202ENST00000503682 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
COPS4-202ENST00000503682 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
COPS4-202ENST00000503682 ABCA5Q8WWZ7 1642 aa17.95■□□□□ 0.46
COPS4-202ENST00000503682 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
COPS4-202ENST00000503682 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
COPS4-202ENST00000503682 MAGI1Q96QZ7 1491 aaPredicted RBP17.92■□□□□ 0.46
COPS4-202ENST00000503682 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
COPS4-202ENST00000503682 CLASP1Q7Z460 1538 aa17.84■□□□□ 0.45
COPS4-202ENST00000503682 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
COPS4-202ENST00000503682 ADAMTS12P58397 1594 aa17.79■□□□□ 0.44
COPS4-202ENST00000503682 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
COPS4-202ENST00000503682 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
COPS4-202ENST00000503682 ERICH3Q5RHP9 1530 aa17.73■□□□□ 0.43
COPS4-202ENST00000503682 CEP170Q5SW79 1584 aa17.73■□□□□ 0.43
COPS4-202ENST00000503682 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
COPS4-202ENST00000503682 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
COPS4-202ENST00000503682 NUP160Q12769 1436 aa17.66■□□□□ 0.42
COPS4-202ENST00000503682 KIF27Q86VH2 1401 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms