RNA–Protein interactions for RNA: ENST00000503671.2

GAR1-203, Transcript of GAR1 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene GAR1, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1-203ENST00000503671 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
GAR1-203ENST00000503671 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
GAR1-203ENST00000503671 ABCC9O60706 1549 aa32.68■■■□□ 2.82
GAR1-203ENST00000503671 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
GAR1-203ENST00000503671 NACADO15069 1562 aa31.21■■■□□ 2.59
GAR1-203ENST00000503671 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
GAR1-203ENST00000503671 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
GAR1-203ENST00000503671 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
GAR1-203ENST00000503671 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
GAR1-203ENST00000503671 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
GAR1-203ENST00000503671 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
GAR1-203ENST00000503671 PABPN1Q86U42 306 aaKnown RBP eCLIP30.34■■■□□ 2.45
GAR1-203ENST00000503671 DNAJC5BQ9UF47 199 aa30.29■■■□□ 2.44
GAR1-203ENST00000503671 SHROOM4Q9ULL8 1493 aa30.17■■■□□ 2.42
GAR1-203ENST00000503671 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
GAR1-203ENST00000503671 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.34
GAR1-203ENST00000503671 CC2D2AQ9P2K1 1620 aa29.62■■■□□ 2.33
GAR1-203ENST00000503671 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.31
GAR1-203ENST00000503671 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
GAR1-203ENST00000503671 NCAPD3P42695 1498 aa28.75■■■□□ 2.19
GAR1-203ENST00000503671 SMARCA2P51531 1590 aa28.7■■■□□ 2.18
GAR1-203ENST00000503671 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
GAR1-203ENST00000503671 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
GAR1-203ENST00000503671 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
GAR1-203ENST00000503671 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
GAR1-203ENST00000503671 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
GAR1-203ENST00000503671 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
GAR1-203ENST00000503671 ERCC6Q03468 1493 aa28.24■■■□□ 2.11
GAR1-203ENST00000503671 CUX2O14529 1486 aa28.19■■■□□ 2.1
GAR1-203ENST00000503671 NESP48681 1621 aa28.14■■■□□ 2.1
GAR1-203ENST00000503671 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
GAR1-203ENST00000503671 WIZO95785 1651 aa28.1■■■□□ 2.09
GAR1-203ENST00000503671 THOC2Q8NI27 1593 aaKnown RBP27.96■■■□□ 2.07
GAR1-203ENST00000503671 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
GAR1-203ENST00000503671 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
GAR1-203ENST00000503671 RSF1Q96T23 1441 aaPredicted RBP27.88■■■□□ 2.05
GAR1-203ENST00000503671 AEBP2Q6ZN18 517 aaPredicted RBP27.85■■■□□ 2.05
GAR1-203ENST00000503671 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
GAR1-203ENST00000503671 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
GAR1-203ENST00000503671 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
GAR1-203ENST00000503671 MRC2Q9UBG0 1479 aa27.66■■■□□ 2.02
GAR1-203ENST00000503671 CFTRP13569 1480 aa27.63■■■□□ 2.01
GAR1-203ENST00000503671 WDR62O43379 1518 aa27.62■■■□□ 2.01
GAR1-203ENST00000503671 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
GAR1-203ENST00000503671 FANCD2Q9BXW9 1451 aa27.55■■■□□ 2
GAR1-203ENST00000503671 PRDM2Q13029 1718 aa27.54■■■□□ 2
GAR1-203ENST00000503671 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
GAR1-203ENST00000503671 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
GAR1-203ENST00000503671 SUPT5HO00267 1087 aaKnown RBP27.22■■□□□ 1.95
GAR1-203ENST00000503671 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
GAR1-203ENST00000503671 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
GAR1-203ENST00000503671 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
GAR1-203ENST00000503671 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
GAR1-203ENST00000503671 ZNF608Q9ULD9 1512 aaPredicted RBP26.89■■□□□ 1.89
GAR1-203ENST00000503671 EIF4G3O43432 1585 aaKnown RBP26.88■■□□□ 1.89
GAR1-203ENST00000503671 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
GAR1-203ENST00000503671 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
GAR1-203ENST00000503671 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
GAR1-203ENST00000503671 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
GAR1-203ENST00000503671 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
GAR1-203ENST00000503671 CUX1P39880 1505 aa26.69■■□□□ 1.86
GAR1-203ENST00000503671 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
GAR1-203ENST00000503671 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.851e-6■□□□□ 10.8
GAR1-203ENST00000503671 SOGA1O94964 1423 aa26.63■■□□□ 1.85
GAR1-203ENST00000503671 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
GAR1-203ENST00000503671 CHD1O14646 1710 aa26.62■■□□□ 1.85
GAR1-203ENST00000503671 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
GAR1-203ENST00000503671 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
GAR1-203ENST00000503671 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
GAR1-203ENST00000503671 TRIM41Q8WV44 630 aa26.52■■□□□ 1.84
GAR1-203ENST00000503671 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
GAR1-203ENST00000503671 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
GAR1-203ENST00000503671 SNAPC4Q5SXM2 1469 aa26.46■■□□□ 1.83
GAR1-203ENST00000503671 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
GAR1-203ENST00000503671 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
GAR1-203ENST00000503671 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
GAR1-203ENST00000503671 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
GAR1-203ENST00000503671 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
GAR1-203ENST00000503671 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
GAR1-203ENST00000503671 TOP2BQ02880 1626 aa26.39■■□□□ 1.82
GAR1-203ENST00000503671 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
GAR1-203ENST00000503671 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
GAR1-203ENST00000503671 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
GAR1-203ENST00000503671 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
GAR1-203ENST00000503671 FBLN2P98095 1184 aa26.33■■□□□ 1.81
GAR1-203ENST00000503671 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
GAR1-203ENST00000503671 CHMP7Q8WUX9 453 aaPredicted RBP26.23■■□□□ 1.79
GAR1-203ENST00000503671 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
GAR1-203ENST00000503671 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
GAR1-203ENST00000503671 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
GAR1-203ENST00000503671 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
GAR1-203ENST00000503671 CYB5RLQ6IPT4 315 aa26.07■■□□□ 1.76
GAR1-203ENST00000503671 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
GAR1-203ENST00000503671 NUP160Q12769 1436 aa26.02■■□□□ 1.76
GAR1-203ENST00000503671 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
GAR1-203ENST00000503671 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
GAR1-203ENST00000503671 CUL7Q14999 1698 aa25.84■■□□□ 1.73
GAR1-203ENST00000503671 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
GAR1-203ENST00000503671 RUSC2Q8N2Y8 1516 aa25.83■■□□□ 1.72
GAR1-203ENST00000503671 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms