RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
SNCA-207ENST00000502987 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SNCA-207ENST00000502987 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
SNCA-207ENST00000502987 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
SNCA-207ENST00000502987 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
SNCA-207ENST00000502987 ABCC9O60706 1549 aa23.82■■□□□ 1.4
SNCA-207ENST00000502987 CCDC180Q9P1Z9 1646 aa23.79■■□□□ 1.4
SNCA-207ENST00000502987 FOXD1Q16676 465 aa22.71■■□□□ 1.23
SNCA-207ENST00000502987 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
SNCA-207ENST00000502987 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
SNCA-207ENST00000502987 NACADO15069 1562 aa22.49■■□□□ 1.19
SNCA-207ENST00000502987 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
SNCA-207ENST00000502987 PABPN1Q86U42 306 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNCA-207ENST00000502987 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
SNCA-207ENST00000502987 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
SNCA-207ENST00000502987 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
SNCA-207ENST00000502987 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
SNCA-207ENST00000502987 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
SNCA-207ENST00000502987 SCRIBQ14160 1630 aa21.75■■□□□ 1.07
SNCA-207ENST00000502987 SHROOM4Q9ULL8 1493 aa21.61■■□□□ 1.05
SNCA-207ENST00000502987 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
SNCA-207ENST00000502987 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
SNCA-207ENST00000502987 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
SNCA-207ENST00000502987 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
SNCA-207ENST00000502987 MSH5O43196 834 aa21.27■■□□□ 1
SNCA-207ENST00000502987 PIAS4Q8N2W9 510 aaPredicted RBP21.18■□□□□ 0.98
SNCA-207ENST00000502987 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
SNCA-207ENST00000502987 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
SNCA-207ENST00000502987 ADRA2BP18089 450 aa21.06■□□□□ 0.96
SNCA-207ENST00000502987 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
SNCA-207ENST00000502987 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
SNCA-207ENST00000502987 ATAD2BQ9ULI0 1458 aa20.7■□□□□ 0.9
SNCA-207ENST00000502987 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
SNCA-207ENST00000502987 BAZ1AQ9NRL2 1556 aaPredicted RBP20.62■□□□□ 0.89
SNCA-207ENST00000502987 ERCC6Q03468 1493 aa20.6■□□□□ 0.89
SNCA-207ENST00000502987 HMGXB3Q12766 1538 aa20.58■□□□□ 0.89
SNCA-207ENST00000502987 BAZ1BQ9UIG0 1483 aaKnown RBP20.55■□□□□ 0.88
SNCA-207ENST00000502987 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
SNCA-207ENST00000502987 CUX2O14529 1486 aa20.45■□□□□ 0.86
SNCA-207ENST00000502987 NESP48681 1621 aa20.45■□□□□ 0.86
SNCA-207ENST00000502987 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
SNCA-207ENST00000502987 DNAJC5Q9H3Z4 198 aa20.43■□□□□ 0.86
SNCA-207ENST00000502987 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
SNCA-207ENST00000502987 WIZO95785 1651 aa20.26■□□□□ 0.83
SNCA-207ENST00000502987 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
SNCA-207ENST00000502987 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
SNCA-207ENST00000502987 THOC2Q8NI27 1593 aaKnown RBP20.18■□□□□ 0.82
SNCA-207ENST00000502987 CADPSQ9ULU8 1353 aa20.15■□□□□ 0.82
SNCA-207ENST00000502987 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
SNCA-207ENST00000502987 MRC2Q9UBG0 1479 aa20■□□□□ 0.79
SNCA-207ENST00000502987 CEP164Q9UPV0 1460 aa19.96■□□□□ 0.79
SNCA-207ENST00000502987 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
SNCA-207ENST00000502987 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
SNCA-207ENST00000502987 WDR62O43379 1518 aa19.92■□□□□ 0.78
SNCA-207ENST00000502987 CFTRP13569 1480 aa19.9■□□□□ 0.78
SNCA-207ENST00000502987 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
SNCA-207ENST00000502987 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
SNCA-207ENST00000502987 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
SNCA-207ENST00000502987 TRIM41Q8WV44 630 aa19.68■□□□□ 0.74
SNCA-207ENST00000502987 OSCARQ8IYS5 282 aa19.62■□□□□ 0.73
SNCA-207ENST00000502987 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
SNCA-207ENST00000502987 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
SNCA-207ENST00000502987 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
SNCA-207ENST00000502987 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
SNCA-207ENST00000502987 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
SNCA-207ENST00000502987 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
SNCA-207ENST00000502987 EIF4G3O43432 1585 aaKnown RBP19.4■□□□□ 0.7
SNCA-207ENST00000502987 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
SNCA-207ENST00000502987 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.69
SNCA-207ENST00000502987 FBLN2P98095 1184 aa19.36■□□□□ 0.69
SNCA-207ENST00000502987 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
SNCA-207ENST00000502987 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
SNCA-207ENST00000502987 SOGA1O94964 1423 aa19.32■□□□□ 0.68
SNCA-207ENST00000502987 RAD54L2Q9Y4B4 1467 aa19.31■□□□□ 0.68
SNCA-207ENST00000502987 RIMBP3CA6NJZ7 1639 aa19.31■□□□□ 0.68
SNCA-207ENST00000502987 RIMBP3BA6NNM3 1639 aa19.31■□□□□ 0.68
SNCA-207ENST00000502987 RIMBP3Q9UFD9 1639 aa19.31■□□□□ 0.68
SNCA-207ENST00000502987 CHD1O14646 1710 aa19.29■□□□□ 0.68
SNCA-207ENST00000502987 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
SNCA-207ENST00000502987 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
SNCA-207ENST00000502987 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
SNCA-207ENST00000502987 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
SNCA-207ENST00000502987 CUX1P39880 1505 aa19.22■□□□□ 0.67
SNCA-207ENST00000502987 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
SNCA-207ENST00000502987 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
SNCA-207ENST00000502987 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
SNCA-207ENST00000502987 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
SNCA-207ENST00000502987 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
SNCA-207ENST00000502987 GRIN2BQ13224 1484 aa19.11■□□□□ 0.65
SNCA-207ENST00000502987 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
SNCA-207ENST00000502987 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
SNCA-207ENST00000502987 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
SNCA-207ENST00000502987 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
SNCA-207ENST00000502987 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
SNCA-207ENST00000502987 SYNJ2O15056 1496 aa19.03■□□□□ 0.64
SNCA-207ENST00000502987 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
SNCA-207ENST00000502987 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
SNCA-207ENST00000502987 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
SNCA-207ENST00000502987 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
SNCA-207ENST00000502987 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms