RNA–Protein interactions for RNA: ENST00000502503.1

FAM172A-202, Transcript of family with sequence similarity 172 member A, humanhuman

TSL 2

Gene FAM172A, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-202ENST00000502503 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
FAM172A-202ENST00000502503 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
FAM172A-202ENST00000502503 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
FAM172A-202ENST00000502503 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
FAM172A-202ENST00000502503 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
FAM172A-202ENST00000502503 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
FAM172A-202ENST00000502503 ABCC9O60706 1549 aa20.47■□□□□ 0.87
FAM172A-202ENST00000502503 FOXD1Q16676 465 aa19.81■□□□□ 0.76
FAM172A-202ENST00000502503 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.74
FAM172A-202ENST00000502503 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
FAM172A-202ENST00000502503 NACADO15069 1562 aa19.55■□□□□ 0.72
FAM172A-202ENST00000502503 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
FAM172A-202ENST00000502503 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
FAM172A-202ENST00000502503 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
FAM172A-202ENST00000502503 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
FAM172A-202ENST00000502503 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
FAM172A-202ENST00000502503 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
FAM172A-202ENST00000502503 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
FAM172A-202ENST00000502503 PLPPR3Q6T4P5 718 aa18.82■□□□□ 0.6
FAM172A-202ENST00000502503 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
FAM172A-202ENST00000502503 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
FAM172A-202ENST00000502503 MSH5O43196 834 aa18.71■□□□□ 0.59
FAM172A-202ENST00000502503 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.57
FAM172A-202ENST00000502503 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
FAM172A-202ENST00000502503 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
FAM172A-202ENST00000502503 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
FAM172A-202ENST00000502503 ADRA2BP18089 450 aa18.37■□□□□ 0.53
FAM172A-202ENST00000502503 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
FAM172A-202ENST00000502503 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
FAM172A-202ENST00000502503 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
FAM172A-202ENST00000502503 BAZ1AQ9NRL2 1556 aaPredicted RBP18.06■□□□□ 0.48
FAM172A-202ENST00000502503 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
FAM172A-202ENST00000502503 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
FAM172A-202ENST00000502503 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
FAM172A-202ENST00000502503 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
FAM172A-202ENST00000502503 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
FAM172A-202ENST00000502503 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
FAM172A-202ENST00000502503 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
FAM172A-202ENST00000502503 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
FAM172A-202ENST00000502503 WIZO95785 1651 aa17.72■□□□□ 0.43
FAM172A-202ENST00000502503 NESP48681 1621 aa17.64■□□□□ 0.41
FAM172A-202ENST00000502503 RSF1Q96T23 1441 aaPredicted RBP17.63■□□□□ 0.41
FAM172A-202ENST00000502503 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
FAM172A-202ENST00000502503 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
FAM172A-202ENST00000502503 CUX2O14529 1486 aa17.53■□□□□ 0.4
FAM172A-202ENST00000502503 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
FAM172A-202ENST00000502503 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
FAM172A-202ENST00000502503 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
FAM172A-202ENST00000502503 THOC2Q8NI27 1593 aaKnown RBP17.4■□□□□ 0.38
FAM172A-202ENST00000502503 CFTRP13569 1480 aa17.35■□□□□ 0.37
FAM172A-202ENST00000502503 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
FAM172A-202ENST00000502503 MRC2Q9UBG0 1479 aa17.33■□□□□ 0.36
FAM172A-202ENST00000502503 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
FAM172A-202ENST00000502503 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
FAM172A-202ENST00000502503 WDR62O43379 1518 aa17.25■□□□□ 0.35
FAM172A-202ENST00000502503 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
FAM172A-202ENST00000502503 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
FAM172A-202ENST00000502503 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
FAM172A-202ENST00000502503 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
FAM172A-202ENST00000502503 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
FAM172A-202ENST00000502503 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
FAM172A-202ENST00000502503 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
FAM172A-202ENST00000502503 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
FAM172A-202ENST00000502503 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
FAM172A-202ENST00000502503 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
FAM172A-202ENST00000502503 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
FAM172A-202ENST00000502503 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
FAM172A-202ENST00000502503 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
FAM172A-202ENST00000502503 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
FAM172A-202ENST00000502503 SOGA1O94964 1423 aa16.81■□□□□ 0.28
FAM172A-202ENST00000502503 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
FAM172A-202ENST00000502503 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
FAM172A-202ENST00000502503 CUX1P39880 1505 aa16.8■□□□□ 0.28
FAM172A-202ENST00000502503 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
FAM172A-202ENST00000502503 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
FAM172A-202ENST00000502503 AQRO60306 1485 aaKnown RBP eCLIP16.77■□□□□ 0.27
FAM172A-202ENST00000502503 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
FAM172A-202ENST00000502503 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
FAM172A-202ENST00000502503 FBLN2P98095 1184 aa16.69■□□□□ 0.26
FAM172A-202ENST00000502503 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
FAM172A-202ENST00000502503 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
FAM172A-202ENST00000502503 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
FAM172A-202ENST00000502503 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
FAM172A-202ENST00000502503 CHD1O14646 1710 aa16.63■□□□□ 0.25
FAM172A-202ENST00000502503 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
FAM172A-202ENST00000502503 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
FAM172A-202ENST00000502503 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
FAM172A-202ENST00000502503 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
FAM172A-202ENST00000502503 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
FAM172A-202ENST00000502503 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
FAM172A-202ENST00000502503 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
FAM172A-202ENST00000502503 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
FAM172A-202ENST00000502503 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
FAM172A-202ENST00000502503 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
FAM172A-202ENST00000502503 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
FAM172A-202ENST00000502503 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
FAM172A-202ENST00000502503 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
FAM172A-202ENST00000502503 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
FAM172A-202ENST00000502503 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
FAM172A-202ENST00000502503 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms