RNA–Protein interactions for RNA: ENST00000502263.1

NHP2-203, Transcript of NHP2 ribonucleoprotein, humanhuman

TSL 2

Gene NHP2, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHP2-203ENST00000502263 NISCHQ9Y2I1 1504 aa23.7■■□□□ 1.38
NHP2-203ENST00000502263 ABCC9O60706 1549 aa21.22■□□□□ 0.99
NHP2-203ENST00000502263 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
NHP2-203ENST00000502263 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
NHP2-203ENST00000502263 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
NHP2-203ENST00000502263 NACADO15069 1562 aa19.99■□□□□ 0.79
NHP2-203ENST00000502263 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
NHP2-203ENST00000502263 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
NHP2-203ENST00000502263 UNC13AQ9UPW8 1703 aa19.81■□□□□ 0.76
NHP2-203ENST00000502263 MYO15BQ96JP2 1530 aa19.69■□□□□ 0.74
NHP2-203ENST00000502263 BICRAQ9NZM4 1560 aa19.66■□□□□ 0.74
NHP2-203ENST00000502263 ZCCHC6Q5VYS8 1495 aaKnown RBP19.66■□□□□ 0.74
NHP2-203ENST00000502263 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
NHP2-203ENST00000502263 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
NHP2-203ENST00000502263 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
NHP2-203ENST00000502263 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
NHP2-203ENST00000502263 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
NHP2-203ENST00000502263 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
NHP2-203ENST00000502263 NCAPD3P42695 1498 aa18.48■□□□□ 0.55
NHP2-203ENST00000502263 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
NHP2-203ENST00000502263 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
NHP2-203ENST00000502263 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
NHP2-203ENST00000502263 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
NHP2-203ENST00000502263 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
NHP2-203ENST00000502263 HMGXB3Q12766 1538 aa18.33■□□□□ 0.52
NHP2-203ENST00000502263 NESP48681 1621 aa18.31■□□□□ 0.52
NHP2-203ENST00000502263 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
NHP2-203ENST00000502263 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
NHP2-203ENST00000502263 ERCC6Q03468 1493 aa18.21■□□□□ 0.51
NHP2-203ENST00000502263 WIZO95785 1651 aa18.13■□□□□ 0.49
NHP2-203ENST00000502263 CUX2O14529 1486 aa18.13■□□□□ 0.49
NHP2-203ENST00000502263 DNAJC5Q9H3Z4 198 aa18.1■□□□□ 0.49
NHP2-203ENST00000502263 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
NHP2-203ENST00000502263 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
NHP2-203ENST00000502263 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
NHP2-203ENST00000502263 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
NHP2-203ENST00000502263 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
NHP2-203ENST00000502263 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
NHP2-203ENST00000502263 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
NHP2-203ENST00000502263 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
NHP2-203ENST00000502263 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
NHP2-203ENST00000502263 WDR62O43379 1518 aa17.76■□□□□ 0.43
NHP2-203ENST00000502263 CFTRP13569 1480 aa17.75■□□□□ 0.43
NHP2-203ENST00000502263 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
NHP2-203ENST00000502263 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
NHP2-203ENST00000502263 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
NHP2-203ENST00000502263 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
NHP2-203ENST00000502263 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
NHP2-203ENST00000502263 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
NHP2-203ENST00000502263 ZNF608Q9ULD9 1512 aaPredicted RBP17.45■□□□□ 0.38
NHP2-203ENST00000502263 TOPBP1Q92547 1522 aa17.44■□□□□ 0.38
NHP2-203ENST00000502263 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
NHP2-203ENST00000502263 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
NHP2-203ENST00000502263 DNMBPQ6XZF7 1577 aa17.35■□□□□ 0.37
NHP2-203ENST00000502263 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
NHP2-203ENST00000502263 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
NHP2-203ENST00000502263 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
NHP2-203ENST00000502263 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.367e-6■■□□□ 13.1
NHP2-203ENST00000502263 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
NHP2-203ENST00000502263 POLA1P09884 1462 aaPredicted RBP17.26■□□□□ 0.35
NHP2-203ENST00000502263 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
NHP2-203ENST00000502263 SUPT5HO00267 1087 aaKnown RBP17.23■□□□□ 0.35
NHP2-203ENST00000502263 CUX1P39880 1505 aa17.21■□□□□ 0.34
NHP2-203ENST00000502263 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
NHP2-203ENST00000502263 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
NHP2-203ENST00000502263 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
NHP2-203ENST00000502263 CHD1O14646 1710 aa17.18■□□□□ 0.34
NHP2-203ENST00000502263 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
NHP2-203ENST00000502263 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
NHP2-203ENST00000502263 SOGA1O94964 1423 aa17.16■□□□□ 0.34
NHP2-203ENST00000502263 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
NHP2-203ENST00000502263 FBLN2P98095 1184 aa17.1■□□□□ 0.33
NHP2-203ENST00000502263 SNAPC4Q5SXM2 1469 aa17.07■□□□□ 0.32
NHP2-203ENST00000502263 WDR97A6NE52 1622 aa17.07■□□□□ 0.32
NHP2-203ENST00000502263 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
NHP2-203ENST00000502263 PBRM1Q86U86 1689 aa16.98■□□□□ 0.31
NHP2-203ENST00000502263 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
NHP2-203ENST00000502263 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
NHP2-203ENST00000502263 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.31
NHP2-203ENST00000502263 SYNJ1O43426 1573 aa16.95■□□□□ 0.3
NHP2-203ENST00000502263 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
NHP2-203ENST00000502263 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
NHP2-203ENST00000502263 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
NHP2-203ENST00000502263 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
NHP2-203ENST00000502263 CHMP7Q8WUX9 453 aaPredicted RBP16.93■□□□□ 0.3
NHP2-203ENST00000502263 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
NHP2-203ENST00000502263 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
NHP2-203ENST00000502263 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
NHP2-203ENST00000502263 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
NHP2-203ENST00000502263 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
NHP2-203ENST00000502263 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
NHP2-203ENST00000502263 CEP170Q5SW79 1584 aa16.78■□□□□ 0.28
NHP2-203ENST00000502263 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
NHP2-203ENST00000502263 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
NHP2-203ENST00000502263 NUP160Q12769 1436 aa16.72■□□□□ 0.27
NHP2-203ENST00000502263 FHAD1B1AJZ9 1412 aa16.71■□□□□ 0.27
NHP2-203ENST00000502263 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
NHP2-203ENST00000502263 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
NHP2-203ENST00000502263 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
NHP2-203ENST00000502263 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms