RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
PLXND1-202ENST00000501038 CCDC180Q9P1Z9 1646 aa35.93■■■■□ 3.34
PLXND1-202ENST00000501038 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
PLXND1-202ENST00000501038 DCAF1Q9Y4B6 1507 aa34.18■■■■□ 3.06
PLXND1-202ENST00000501038 DCAF8L2P0C7V8 631 aa33.98■■■■□ 3.03
PLXND1-202ENST00000501038 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
PLXND1-202ENST00000501038 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
PLXND1-202ENST00000501038 ABCC9O60706 1549 aa33.62■■■□□ 2.97
PLXND1-202ENST00000501038 NACADO15069 1562 aa33.35■■■□□ 2.93
PLXND1-202ENST00000501038 SCRIBQ14160 1630 aa33.08■■■□□ 2.89
PLXND1-202ENST00000501038 RB1CC1Q8TDY2 1594 aa32.99■■■□□ 2.87
PLXND1-202ENST00000501038 SUPT5HO00267 1087 aaKnown RBP32.83■■■□□ 2.85
PLXND1-202ENST00000501038 UNC13AQ9UPW8 1703 aa32.42■■■□□ 2.78
PLXND1-202ENST00000501038 RSF1Q96T23 1441 aaPredicted RBP32.19■■■□□ 2.74
PLXND1-202ENST00000501038 CECR2Q9BXF3 1484 aa32.09■■■□□ 2.73
PLXND1-202ENST00000501038 BICRAQ9NZM4 1560 aa32■■■□□ 2.71
PLXND1-202ENST00000501038 MROH2BQ7Z745 1585 aa31.96■■■□□ 2.71
PLXND1-202ENST00000501038 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
PLXND1-202ENST00000501038 WIZO95785 1651 aa31.76■■■□□ 2.68
PLXND1-202ENST00000501038 PABPN1Q86U42 306 aaKnown RBP eCLIP31.75■■■□□ 2.67
PLXND1-202ENST00000501038 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
PLXND1-202ENST00000501038 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
PLXND1-202ENST00000501038 TOP2AP11388 1531 aaKnown RBP31.42■■■□□ 2.62
PLXND1-202ENST00000501038 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
PLXND1-202ENST00000501038 SMARCA2P51531 1590 aa31.14■■■□□ 2.58
PLXND1-202ENST00000501038 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
PLXND1-202ENST00000501038 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
PLXND1-202ENST00000501038 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
PLXND1-202ENST00000501038 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
PLXND1-202ENST00000501038 TRIM41Q8WV44 630 aa30.83■■■□□ 2.53
PLXND1-202ENST00000501038 HMGXB3Q12766 1538 aa30.77■■■□□ 2.52
PLXND1-202ENST00000501038 NCAPD3P42695 1498 aa30.74■■■□□ 2.51
PLXND1-202ENST00000501038 ABCC8Q09428 1581 aa30.56■■■□□ 2.48
PLXND1-202ENST00000501038 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
PLXND1-202ENST00000501038 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
PLXND1-202ENST00000501038 FAM9AQ8IZU1 332 aaPredicted RBP30.29■■■□□ 2.44
PLXND1-202ENST00000501038 WRNQ14191 1432 aaPredicted RBP eCLIP30.29■■■□□ 2.44
PLXND1-202ENST00000501038 SYNJ1O43426 1573 aa30.19■■■□□ 2.42
PLXND1-202ENST00000501038 PRDM2Q13029 1718 aa30.16■■■□□ 2.42
PLXND1-202ENST00000501038 CFTRP13569 1480 aa30.16■■■□□ 2.42
PLXND1-202ENST00000501038 EEA1Q15075 1411 aa30.05■■■□□ 2.4
PLXND1-202ENST00000501038 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
PLXND1-202ENST00000501038 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
PLXND1-202ENST00000501038 SOGA1O94964 1423 aa30.03■■■□□ 2.4
PLXND1-202ENST00000501038 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
PLXND1-202ENST00000501038 RUSC2Q8N2Y8 1516 aa29.91■■■□□ 2.38
PLXND1-202ENST00000501038 CUX1P39880 1505 aa29.87■■■□□ 2.37
PLXND1-202ENST00000501038 EHMT2Q96KQ7 1210 aa29.85■■■□□ 2.37
PLXND1-202ENST00000501038 CSRNP3Q8WYN3 585 aa29.82■■■□□ 2.36
PLXND1-202ENST00000501038 KIF21BO75037 1637 aa29.69■■■□□ 2.34
PLXND1-202ENST00000501038 LAMC3Q9Y6N6 1575 aa29.67■■■□□ 2.34
PLXND1-202ENST00000501038 FANCD2Q9BXW9 1451 aa29.67■■■□□ 2.34
PLXND1-202ENST00000501038 GOLGA3Q08378 1498 aa29.67■■■□□ 2.34
PLXND1-202ENST00000501038 NESP48681 1621 aa29.64■■■□□ 2.33
PLXND1-202ENST00000501038 TNIKQ9UKE5 1360 aa29.62■■■□□ 2.33
PLXND1-202ENST00000501038 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
PLXND1-202ENST00000501038 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
PLXND1-202ENST00000501038 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
PLXND1-202ENST00000501038 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
PLXND1-202ENST00000501038 KIF27Q86VH2 1401 aa29.49■■■□□ 2.31
PLXND1-202ENST00000501038 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
PLXND1-202ENST00000501038 UBTFP17480 764 aaKnown RBP29.47■■■□□ 2.31
PLXND1-202ENST00000501038 TOPBP1Q92547 1522 aa29.41■■■□□ 2.3
PLXND1-202ENST00000501038 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
PLXND1-202ENST00000501038 RAPGEF2Q9Y4G8 1499 aa29.4■■■□□ 2.3
PLXND1-202ENST00000501038 PDS5BQ9NTI5 1447 aa29.39■■■□□ 2.3
PLXND1-202ENST00000501038 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
PLXND1-202ENST00000501038 PRXQ9BXM0 1461 aa29.38■■■□□ 2.29
PLXND1-202ENST00000501038 CUX2O14529 1486 aa29.35■■■□□ 2.29
PLXND1-202ENST00000501038 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
PLXND1-202ENST00000501038 TRIM26Q12899 539 aaPredicted RBP29.31■■■□□ 2.28
PLXND1-202ENST00000501038 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
PLXND1-202ENST00000501038 POLA1P09884 1462 aaPredicted RBP29.27■■■□□ 2.28
PLXND1-202ENST00000501038 ABCA10Q8WWZ4 1543 aa29.22■■■□□ 2.27
PLXND1-202ENST00000501038 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
PLXND1-202ENST00000501038 CLIP1P30622 1438 aa29.18■■■□□ 2.26
PLXND1-202ENST00000501038 IGF1RP08069 1367 aa29.17■■■□□ 2.26
PLXND1-202ENST00000501038 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
PLXND1-202ENST00000501038 CARMIL1Q5VZK9 1371 aa29.04■■■□□ 2.24
PLXND1-202ENST00000501038 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
PLXND1-202ENST00000501038 CUL7Q14999 1698 aa29■■■□□ 2.23
PLXND1-202ENST00000501038 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
PLXND1-202ENST00000501038 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
PLXND1-202ENST00000501038 PPARGC1BQ86YN6 1023 aaKnown RBP28.97■■■□□ 2.23
PLXND1-202ENST00000501038 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
PLXND1-202ENST00000501038 RANGAP1P46060 587 aaPredicted RBP28.89■■■□□ 2.22
PLXND1-202ENST00000501038 ARAP1Q96P48 1450 aa28.89■■■□□ 2.21
PLXND1-202ENST00000501038 WDR62O43379 1518 aa28.87■■■□□ 2.21
PLXND1-202ENST00000501038 GAPVD1Q14C86 1478 aa28.87■■■□□ 2.21
PLXND1-202ENST00000501038 HRCP23327 699 aa28.86■■■□□ 2.21
PLXND1-202ENST00000501038 TDRD9Q8NDG6 1382 aaKnown RBP28.85■■■□□ 2.21
PLXND1-202ENST00000501038 ARHGAP35Q9NRY4 1499 aa28.8■■■□□ 2.2
PLXND1-202ENST00000501038 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
PLXND1-202ENST00000501038 PBRM1Q86U86 1689 aa28.77■■■□□ 2.2
PLXND1-202ENST00000501038 CTTNBP2Q8WZ74 1663 aa28.76■■■□□ 2.2
PLXND1-202ENST00000501038 THOC2Q8NI27 1593 aaKnown RBP28.73■■■□□ 2.19
PLXND1-202ENST00000501038 IFT140Q96RY7 1462 aa28.72■■■□□ 2.19
PLXND1-202ENST00000501038 APLP2Q06481 763 aa28.68■■■□□ 2.18
PLXND1-202ENST00000501038 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
PLXND1-202ENST00000501038 AQRO60306 1485 aaKnown RBP eCLIP28.61■■■□□ 2.179e-10■■■■□ 21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms